Pseudochaenichthys georgianus (South Georgia icefish): 117441889
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Entry
117441889 CDS
T09629
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117441889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117441889
03012 Translation factors [BR:
pgeo03012
]
117441889
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117441889
Translation factors [BR:
pgeo03012
]
Eukaryotic type
Release factors
117441889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D2
GTP_EFTU_D3
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
117441889
NCBI-ProteinID:
XP_033933798
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MDPRDTAPDSWELEEEDAEALAVAADLQASFAALNVNAKPFVPNVNAAVFVPSFFQASPA
ETPAPVAAPDPVASMEVAETAGMKPHCSVAAPVENGSSEAKMTTEEETWEQKEEPGDGGG
GGGEGGEEDLVPGACEEGVARIEEEEEMMEEEEEEMPMPKVAPAPPNAPKKEHVNVVFIG
HVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVE
VGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTR
EHAMLAKTAGVKHLIVLVNKMDDPTVNWSLDRYEECKEKLVPFLKKVGFNPKKDIYFMPC
SGLTGANLKDPLTECLWYTGMPFISHLDSLPNFTRSHDGPVRLPIVDKYKDMGTVILGKL
ESGCISKAQQLIMMPNRHTVEVLSLLSDDVETDDATPGENLKLRLKGIEEEEILPGFILC
SPDNICHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKSGRKAK
SDRAS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcatgggagctggaggaggaggatgccgaggcc
ctggctgttgctgcggatcttcaggcctcatttgccgcccttaacgttaatgccaagccg
tttgtccccaacgtgaacgccgcggtgtttgtgccgagcttctttcaagcaagccccgca
gagacaccagcgccagtcgcggcccctgatccagtagccagcatggaggtggcagaaacg
gccggtatgaagcctcactgttcagttgcagctccggtggagaacggaagctcagaggcc
aagatgaccacagaggaggagacgtgggagcagaaggaggagcctggagatggaggagga
ggtgggggagaaggaggagaggaagatctggtaccaggagcctgcgaagagggtgtggcc
aggatcgaagaagaagaggagatgatggaggaggaagaggaggagatgccgatgcccaaa
gtggctccggcaccaccaaatgccccgaagaaggaacatgtgaacgtggtcttcatcggt
cacgtggatgctggaaaatcaactatcggaggacagatcatgtatttaactggaatggtg
gaaaagcgaaccctggagaaatatgaaagagaggcgaaagagaagaacagggagacatgg
tacctgtcgtgggctctggacacaaaccaggaggagagagacaaggggaagacggtggag
gtggggagggcttactttgagacggagaagaaacatttcaccatcctggacgcccccgga
cacaagagcttcgtccccaacatgatcgggggggcgtcacaagccgacctggctgtgctg
gtgatttcggcgaggaagggggagtttgagacgggctttgagaagggggggcagacacgg
gaacatgccatgctcgctaaaacggccggggtcaaacatctcatcgtcctggtgaacaag
atggacgaccccacggtcaactggagcctcgacaggtatgaagagtgtaaggagaagctg
gttcccttcctaaagaaggtgggcttcaaccccaagaaggacatctactttatgccttgc
tccggactcacaggtgccaacctcaaagaccccctcacagaatgcctctggtacacgggt
atgccatttatttcccacctggacagtttgccaaacttcaccagatcccacgacggaccg
gtgagactacccatcgtagacaagtacaaggacatgggcacagtgatcctggggaagctg
gagtcggggtgcatcagtaaagcgcagcagctcatcatgatgcccaaccggcacacagtg
gaggtcctcagtctgctgagcgacgatgtggagacggacgatgcgactcccggggagaat
ctgaagctgaggctgaagggcatcgaggaggaggagatcctgccggggttcatcctctgc
agccccgacaacatctgccactccgggcgcaccttcgacgcacagatcgtcatcattgag
cacaagtcaatcatttgtcccggttacaacgcagtccttcacatccacacctgcatcgag
gaagtgcagatctcagccttaatctgtctggtggataagaagtcggggagaaaagcaaag
tccgaccgcgcttcgtga
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