Pseudochaenichthys georgianus (South Georgia icefish): 117442051
Help
Entry
117442051 CDS
T09629
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117442051 (smc6)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117442051 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
117442051
NCBI-ProteinID:
XP_033933938
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MSKSRGGVMVSGGKRRRVSDERDSSNTGDIGLIESIALKNFMCHRLLGPFQFGPNVNFIV
GNNGSGKSAILTALIVGLGGKATDTNRGTSVKDFVKTGETSAEITVKVRNRGLDAFKRDV
YGDSISIERRIFSDGSRTCKLRSKTGQLISNKKEELTSILDHFNIQLDNPVSILNQEMSK
QFLHSKSESDKYQFFMKATLLDQMKRDFVHIKQTKTLTRQQVERQEEALKDLKLDFLQKK
ERFETLHSFSDMREQLPSLQRNMAWSLVRDKEQFVQRLKEDVEKEESNQKHQESLKLCQT
ELTAAEQKLRGVRSRIESVTQEQEALSEGHLRLKEQLKVVSKEHNEQEIVYFRALNKFKE
SEREQNFLQEKINKTRTSLSVSKDGETEYSKQQKRIVSLRKQLEEVEETHSQLNEEIKNE
HQALFTGREARDKLRLEERNIQVLLDSKVRRRNQVLASRSNKLKRFGDQVPDLLISIDEA
NAAGRFKKKPIGPLGAFISLKDPLLAAAVEACLRGFMKAFCCDNHRDEALLQDIMRRHYT
KGNRPQINVSRFSEKLYNLRGRKALHTDFPSLLDVITVTSPVVFNCLIDMRGVESILIIK
ENEVARQVMQQSRPPKNCREAFTAEGDQVFPNRYYTSDCKRAKYLGADLETEIRVLDCDL
ESLQAQLSRLQLQDRCVSANIQKMESGLNRTVLNLKRNLASGNQVEASTSELEAAGEERI
EDICSLEEVAEESRQKMEAERQAMIEEKEELEQHGENVEHMESKDSSVRERIDRLCEEVE
AMKEEQLELEAECSKHEQSLQVSEKKLKSHAETMAEMKSGLAQTEEELKECVSKASEISP
QRQVVSASSRSLDTEITRLQRKIKVYESIHGEQQLTVREYAEAVSLFRQKSKQARDLRRF
IDRLEHIISDRQSRYKVLRRSLSVRCKLYFNNFMIKMNCCGSMIFDHDNETLSISVMPPG
RGDEGVLSDMRSLSGGERSFSTVCFMLSLWEITESPFRCLDEFDVYMDMHNRRISLDLLL
ELSERQTLRQFIFVTPLTTSNLPKSRLIKIHKLPDPERICSEAQQEDKDA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagagcagaggaggagtgatggtgtcgggggggaagagacggagggtttcggac
gagagagactccagcaacacgggggacattggtctgatcgagagcatcgctctgaagaac
ttcatgtgtcaccgtctgctcggacccttccagttcggacccaacgtcaacttcatcgtg
ggaaacaacggcagtgggaagagtgcgattctgacggctctgatcgtgggtctcggagga
aaagcaacggacacgaacagagggacgtctgtgaaggactttgtgaagaccggcgagact
tctgcagaaatcactgtgaaggtgagaaacagaggactggacgcttttaaaagagacgtc
tacggagacagcatctccatcgagagacgcatcttcagcgatggcagccggacctgcaag
ctgaggagcaaaactggacagcttatctcgaacaagaaggaggagctgacctccattctg
gaccactttaacatccagctggataaccccgtgtccatcctgaaccaggagatgagtaaa
cagttcctgcattcaaagagtgaatcagacaaataccagttcttcatgaaggcgacgctc
ctggatcagatgaagagggattttgttcacatcaaacaaaccaaaaccctcaccagacag
caggtggagagacaggaggaggctctgaaggacctgaagctggacttcctgcagaagaag
gagcgcttcgagacgctgcactccttcagcgacatgagggagcagctgccgagcctccag
aggaacatggcctggagtctggtgcgagataaggagcagtttgtgcagcggttaaaggag
gacgtggagaaagaggagagtaatcagaaacatcaggagagcctcaagctctgccagact
gagctcacggcagcagagcagaagctgcggggcgttagaagcagaattgaaagtgtgacg
caggaacaggaagctctttctgaaggtcatctgaggttaaaggagcagctgaaggtcgtc
agcaaagagcacaatgaacaggagatcgtttattttagggctctgaacaaattcaaagag
tcggagcgagagcagaactttcttcaggagaaaataaacaagacgagaacaagtctcagt
gtgagtaaagatggagagacggagtattcgaagcagcagaagaggatcgtgagtttgagg
aagcagctggaggaagtcgaggaaacgcattcgcagctgaacgaggaaataaagaacgag
catcaggcgctgttcacgggaagagaggcgcgcgacaaactgagactggaagagaggaac
atccaggttctgttggattccaaagtgaggaggaggaaccaggttctggccagccggtcc
aacaaactgaagcgtttcggagaccaagttccagaccttttgatttccatcgatgaggcg
aacgctgccggacgcttcaagaaaaaacccatcggacccctgggggcgttcatcagcctg
aaggaccccctgctggcagcagctgtggaggcgtgtctgcgcggcttcatgaaggcgttc
tgctgcgataaccaccgcgacgaggcgctgctgcaggacatcatgaggcggcattacacg
aaaggaaaccgaccgcagatcaacgtcagccgcttctccgagaaactctacaacctgcgc
gggaggaaggctcttcatacagactttccctcgctgctcgacgtcatcaccgtcacgagt
ccggtcgtcttcaactgtctgatcgatatgagaggcgtcgagtccatcctcatcatcaag
gagaatgaggtggctcggcaggtgatgcagcagagtcgtcctccgaagaactgcagagag
gcgttcactgctgagggcgatcaggtgtttcctaacagatactacacctccgactgcaag
cgggccaaatacctgggagcagatctggagacagagatcagggttctggactgtgacctg
gagagccttcaggcccagctgagccgcttgcagctgcaggaccgctgcgtcagcgccaac
atccagaagatggagagcggactgaacagaaccgtcctgaatctgaagaggaacctggct
tctgggaatcaggtggaagcgtcgacatcagagctggaggcggcgggggaggagcgcatc
gaggacatctgctctttggaggaggttgctgaggagagtcggcagaagatggaggccgag
cggcaggcgatgatcgaggagaaagaagagctggaacaacatggagaaaacgttgaacac
atggaatcgaaagactcgtcggtcagagagagaatcgaccgactctgtgaggaagtcgag
gcgatgaaggaggagcagctggagctggaggctgagtgcagcaaacatgaacaaagcctc
caggtttcagagaagaaactgaagagtcatgcagaaacgatggcagagatgaagagtggc
ctcgcccagacagaggaagagctgaaggagtgtgtgagtaaagcgtcagagatcagtcct
cagcgacaggtcgtgtccgccagctcgaggagtttggacacagaaataactcgactgcag
aggaagatcaaagtttacgagagcattcacggagagcagcagctcacagtgagggagtac
gccgaggcggtgtctctgttcagacagaagagcaaacaggcgagagacctgcggagattc
atcgaccgcctcgaacacatcatatcggacagacagagcagatacaaggtcctgaggagg
tctctatcggtcaggtgtaaattatattttaataacttcatgataaagatgaactgctgc
ggctccatgatcttcgaccacgacaacgagacgctctccatctccgtgatgcccccgggc
cggggggatgagggcgtgttgagtgacatgcgctctctgagtggaggcgagcgctcgttc
tccaccgtctgcttcatgctctctctgtgggagatcacagagtctcccttcaggtgcctc
gacgagttcgacgtctacatggatatgcacaaccggcggatctctctggatctcctgctg
gagctttctgagcgacagacccttcgtcagttcatcttcgtcactcctctcaccaccagc
aatcttccaaagtccagactgataaagatccacaagctgccggatccagagagaatctgc
agcgaggctcagcaggaagacaaggacgcttag
DBGET
integrated database retrieval system
