Pseudochaenichthys georgianus (South Georgia icefish): 117442096
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Entry
117442096 CDS
T09629
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117442096
Pattern recognition receptors [BR:
pgeo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117442096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
LRR_6
LRR_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
117442096
NCBI-ProteinID:
XP_071058453
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MSLMILQSETLQWSLRFDTTTDPPGIYRGRLSLPTCKMDTTDPKIQHEGPDPPGPGPSCV
SMKNGNSTPRFIDFKDGEHDDSPEIHHEGPDPPGPSCVSMKSDWSMPLPIGFKDGEHSDG
PSSSLHFILFQLLEDHIVTFVKNELKKIQTVLTSDYPECLESQSEDEEVLDGEDEEQRRS
SREAFLNISLHFLRSMKQEELADRLQSRTAAAVCRRNLKSSLKERFQCVFEGIAKAGNPT
LLNQIYTELYITEGGSAEVNAEHEVRQIETASRKPDRPETTIRQEDLFKASPGRDAPIRA
VLTKGVAGIGKTVLTQKFTLDWAEGKANQDIQFIFPFTFRELNVVRENKYSLVELVHHFF
SETRDAGICRFDQFPVVFIFDGLDECRLPLDFLNTEVLTDVTESTSVDVLLTNLIRGKLL
PSARLWITTRPAAANQIPPECVDMVTEVRGFTDAQKEEYFRKRFRDQEQAGTIISHIKAS
RSLHIMCHIPVFCWISASVLEEVLKTREGGELPKTLTEMYIHFLVVQSKVKNIKYDGGAE
TDPHWSPESRKMMVSLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFREE
RGLYQDQVFCFVHLSVQEFLAALHVHLTFISSGVNLLAEEPTTSQKSEDESELTHLYQSA
VDQALKSPYGHLDLFLRFLLGLSLQTNQKHLRGLLTQTGSGSETNQETVQYIKKKMDEDL
SPERSINLFHCLNELNDRSLVEQIQQSLSSGSLSTDNLSPAQWSALVFILLSSGEDLDVF
DLKKYSASEEALLRLLPVVKASRKAMLSDCNLSERSCEALSSVLSSQSSSLRELDLSNND
LQDSGVKNLCAGLESPHCELETLRVDHGGEQRLKPGLRKYACELTLDPNTAHIRLKLSDN
NREVTCVREKQRCPDRPERSSDWEQLMCREALTGRCYWEVEWRGGVYVSVTYRGISRRGG
RGDCGFGLNDQSWSLICSDGGHSVWHNERETFLHPSPSSSPSGRVAVYLDHPAGSLSFYR
VSSDTLTHLHTFRTTFTEPLYAGFGLMSLDSSVSLCPL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaatgatactgcagtcagagacgctccagtggagtctcaggttcgacaccaca
acagatcctccaggaatctacagaggacgtttgagcctgccaacctgcaagatggacacc
actgatccaaagatccagcatgagggaccagaccctcctggacccggacccagctgtgtg
tccatgaagaatggaaactctacgcctcgatttattgattttaaagatggagagcatgat
gatagtccagagatccaccatgagggaccagaccctcctggacccagctgtgtgtccatg
aagagtgactggtctatgcctctacctattgggtttaaagatggagagcatagcgatgga
ccaagttcaagtttacattttattctgttccagctgctggaggaccacatcgtcactttt
gtgaagaacgagctgaagaagatccagacagtcctgacttcagattacccagaatgctta
gagagtcagagtgaggatgaggaggtgctggacggtgaggatgaagagcagaggaggagc
agcagagaggcctttctgaacatctcactgcacttcctgaggagcatgaagcaggaggag
ctggctgaccgtctgcagagcagaactgctgctgcagtctgcagacgtaatctcaaatcc
agcctgaaggagaggttccagtgtgtgtttgagggcattgctaaagcaggaaacccaacc
cttctgaaccagatctacacagagctctacatcacagagggggggtctgcagaggtcaat
gctgaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaaaca
acaatcagacaagaagacctctttaaagcctcacctggaagagatgcaccaatcagagca
gtgctgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctg
gactgggctgaaggcaaagccaaccaggacatccagttcatatttccattcaccttcaga
gagctgaatgtggtgagagagaacaagtacagcttggtggaactcgttcatcacttcttc
tctgaaaccagagacgcaggaatctgcaggtttgatcagttcccggtcgtgttcatcttt
gacggtctggatgagtgtcgacttcctctggacttcctcaacactgaggtgctgactgat
gtcacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaagctgctt
ccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgag
tgtgtggacatggtgacagaggtccgagggttcactgacgcacagaaggaggagtacttc
aggaagagattcagagatcaggagcaggccggcaccatcatctcccacatcaaggcctca
cgaagcctccacatcatgtgccacatcccagtcttctgctggatctctgcttcagttctg
gaggaggtgttgaaaaccagagagggaggagagctgcccaagaccctgactgagatgtac
atccacttcctggtggttcagtccaaagtgaagaacatcaagtatgatggaggagctgag
acagatccacactggagtccagagagcaggaagatgatggtgtctctggggaaactggct
tttgagcagctgcagaaaggcaacctgatcttctatgagtccgacctgacagagtgtggc
atcgatatcagagcagcctcagtgtactcaggagtgttcacacaggtcttcagagaggag
agaggactgtaccaggaccaggtgttctgcttcgtccatctgagcgttcaggagtttctg
gctgctcttcatgtccatctgaccttcatcagctctggagtcaacctgctggcagaagaa
ccaacaacctcccagaagtctgaagatgaatctgaactaacacatctctaccagagtgct
gtggaccaggccttaaagagtccatacggacacctggacttgttcctccgcttcctgctg
ggtctttcactgcagaccaatcagaaacacctacgaggcctgctgacacagacaggaagt
ggttcagagaccaatcaggaaaccgtccagtacatcaagaagaagatggatgaggatctg
tctccagagagaagcatcaacctgttccactgtctgaatgaactgaatgatcgttctcta
gtggagcagatccaacagtccctgagttcaggaagtctctccacagataatctgtctcct
gctcagtggtcagctctggtcttcatcttactttcatcaggagaagatctggacgtgttt
gacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaa
gcctccaggaaagccatgctgagtgactgcaacctgtcagagagaagctgtgaagctctg
tcctcagtcctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgac
ctgcaggattcaggagtgaagaacctgtgtgctggactggagagtccacactgtgagctg
gagactctcagagtggaccatggtggagagcagaggttaaaaccaggtctgaggaagtat
gcctgtgaactcacactggacccaaacacagcacacataagactcaaactgtctgacaac
aacagggaggtgacatgtgtgagagagaagcagcgatgccctgatcgtccagagagaagc
tctgactgggaacagctgatgtgtagagaagctctgactggtcgctgttactgggaggtc
gagtggagaggaggggtttatgtatcagtgacttacagaggaatcagcaggagaggaggc
aggggggactgtgggtttggattgaatgatcagtcctggagtctgatctgctctgatggt
ggtcactctgtttggcacaatgagagagaaacattccttcatccctccccctcctcctcc
ccctctggtagagtagcagtgtatctggatcatcctgctggctctctctccttctacaga
gtctcctctgacacactgacccacctccacaccttcagaaccacattcactgaacctctg
tatgctgggtttgggctcatgtcacttgactcctcagtgtctctgtgtcctctgtag
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integrated database retrieval system
