Pseudochaenichthys georgianus (South Georgia icefish): 117442103
Help
Entry
117442103 CDS
T09629
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117442103
Pattern recognition receptors [BR:
pgeo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117442103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
DFF-C
BNIP3
Motif
Other DBs
NCBI-GeneID:
117442103
NCBI-ProteinID:
XP_033933998
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MESESTRPPSFEDGEHSDGPRVHQQRSEGPGGQSAQQLQTHLDSILMLLEDHIVSFVKNE
LKKIQTVLTSDFPECLESQREDEVLDGEDEEQRSREAFLNISLHFLRSMKQEELAERLQS
RTAAAVCRRKLKSNLKERFQCVFEGIAKAGNPTLLNQIYTELYITEGGSAEVNAEHEVRQ
IETASRKPDRPETTIRQEDLFKASPGRDAPIRAVLTKGVAGIGKTVLTQKFTLDWAEGKA
HQDIQFTFPFTFRELNVVRENKYSLVELVHHFFPETRDAGICRFDQFPVVFIFDGLDECR
LPLDFLNTEILTDVTESTSVGRLLTNLIRGKLLPSARLWITTRPAAANQIPPECVHMVTE
VRGFTDPQKEEYFRKRFRDPEQAGTIISHIKTSRSLHIMCHIPVFCWISASVLEELLKTR
EGGELPKTLTEMYIHFLVVQSKVKNIKYDGGAETDPHWSPESRKMMESLGKLAFEQLQKG
NLIFYESDLTECGIDIRAASVYSGVFTQVFREERGLYQDQVFCFVHLSVQEFLAALHVHL
TFISSGVNLLAEEPTTSWWPKVKPRLTHLYQNAVDQALKSPYGHLDLFLRFLLGLSLETN
QTLLRGLLTQTGSGSETNQKTVQYIKKKMDEDLSPEKSINLFHCLNELNDCSLVDQIQQS
LSSGSLSTEDLSPAQWSALVFILLSSGEDLDVFDLKKYSASEEGLLRLLPVVKASNKALL
SGCKLSERSCAALSSVLSSQSSRLRDLDLSNNDLQDSGVKNLCAGLESPHCELETLRLSG
CLVTNIGCASLTSALSSNPSRLRELDLSYNHPGDSGVKLLSVLLDDAKCRLETLRTDHCG
EKWLKPGLRKYSCELTLDPNTAYRHLKLSDSNRTVTCVREEQLYPDHPERFDSCLQLMCR
EALTGLCYWEVEWRGGVHISVTYRGIKRRGEREDSQFGGNDQSWSLICSDGYYSVWHNER
EKLLHPSSSSSSSSSSSSSSSSSSSSPSSPSPPSSSSSSPSSCSGRVAVYLDHPAGSLSF
YRVSSDTLTHLHTFRTTSTEPVYAGFGFWSDDSSVSLCPL
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgaatcgactcgacctccatcgtttgaagatggagagcatagtgatggacca
agagttcatcagcagagatcagagggtcctggtggtcagtctgcccagcagcttcaaact
cacctggactccatattgatgctgctggaggaccacatcgtctcttttgtgaagaacgag
ctgaagaagatccagacggtcctgacttcagatttcccagaatgcttagagagtcagagg
gaggacgaggtgttggacggtgaggatgaagagcagaggagcagagaggcctttctgaac
atctcactgcacttcctgaggagcatgaagcaggaggagctggctgagcgtctgcagagc
agaactgctgctgcagtctgcagacgtaaactcaaatctaacctgaaggagaggttccag
tgtgtgtttgagggcattgctaaagcaggaaacccaacccttctgaaccagatctacaca
gagctctacatcacagagggggggtctgcagaggtcaatgctgaacatgaggtcagacag
attgaaacagcatccaggaaaccagacagaccagaaacaaccatcagacaagaagacctc
tttaaagcctcacctggaagagatgcaccaatcagagcagtgctgacaaagggcgtggct
ggcattgggaagacagtcttaacacagaagttcactctggactgggctgaaggcaaagcc
caccaggacatccagttcacatttccattcaccttcagagagctgaacgtggtgagagag
aacaagtacagcttggtggaactcgttcatcacttcttccctgaaaccagagacgcagga
atctgcaggttcgatcagttcccggtcgtgttcatctttgacggtctggatgagtgtcga
cttcctctggacttcctcaacactgagatcctgactgatgtcacagagtccacctcagtg
ggtcggctgctgacaaacctcatcagggggaagctgcttccctctgctcgcctctggata
accacacgacctgcagcagccaatcagatccctcctgagtgtgtgcacatggtgacagag
gtccgagggttcactgacccacagaaggaggagtacttcaggaagagattcagagatccg
gagcaggccggcaccatcatctcccacatcaagacctcacgaagcctccacatcatgtgc
cacatcccagtcttctgctggatctctgcttcagttctggaggagctgttgaaaaccaga
gaggggggagagctgcccaagaccctgactgagatgtacatccacttcctggtggttcag
tccaaagtgaagaacatcaagtatgatggaggagctgagacagatccacactggagtcca
gagagcaggaagatgatggagtctctggggaaactggcttttgagcagctgcagaaaggc
aacctgatcttctacgagtccgacctgacagagtgtggcatcgatatcagagcagcctca
gtgtactcaggagtgttcacacaggtctttagagaggagagaggactgtaccaggaccag
gtgttctgcttcgtccatctgagcgttcaggagtttctggctgctcttcatgtccatctg
accttcatcagctctggggtcaacctgctggcagaagaaccgacaacctcctggtggcct
aaagtcaaacctagactaacacatctctaccagaatgctgtggaccaggccttaaagagt
ccatacggacacctggacttgttcctccgcttcctgctgggtctttcactggagaccaat
cagactctcctacgaggcctgctgacacagacaggaagtggctcagagaccaatcagaaa
acagtccagtacatcaagaagaagatggatgaggatctgtctccagagaaaagcatcaac
ctgttccactgtctgaatgaactgaatgattgttctctagtggatcagatccaacagtcc
ctgagttcaggaagtctctccacagaggatctgtctcctgctcagtggtcagctctggtc
ttcatcttactgtcatcaggagaagatctggacgtgtttgacctgaagaaatactctgct
tcagaggagggtcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactg
agtggctgtaagctgtcagagagaagctgtgcagctctgtcctcagtcctcagctcccag
tcctctagactgagagatctggacctgagtaacaacgacctgcaggattcaggagtgaag
aacctgtgtgctggactggagagtccacactgtgagctggagactctcaggctctcaggt
tgtctggtcacaaacataggctgtgcttctctgacctcggctctgagctccaacccctcc
cgtctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctgctg
tctgttctactggatgatgcaaagtgcagactggagactctcaggaccgaccattgtgga
gagaagtggttaaaacctggtctgaggaaatattcctgtgaactcacactggacccaaac
acagcatacagacacctcaaactgtctgacagcaacaggacggtgacatgtgtgagagag
gagcagctatatcctgatcatccagagaggtttgactcctgtcttcaactgatgtgtaga
gaagctctgactggtctctgttactgggaggtcgagtggagaggaggggttcatatatca
gtgacttacagaggaatcaagaggagaggagagagagaggactctcagtttggagggaat
gatcagtcctggagtctgatctgctctgatggttattactctgtctggcacaatgagaga
gaaaaactcctccatccctcctcctcctcctcctcctcctcctcctcctcctcctcctcc
tcctcctcctcctcctccccctcctccccctcccccccctcctcgtcctcctcctccccc
tcctcctgctctggtagagtagcagtgtatctggatcatcctgctggctctctctccttc
tacagagtctcctctgacacactgacccacctccacaccttcagaaccacatccactgaa
cctgtgtatgctgggtttgggttctggtcagatgactcctcagtgtctctgtgtcctctg
tag
DBGET
integrated database retrieval system
