Pseudochaenichthys georgianus (South Georgia icefish): 117442107
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Entry
117442107 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117442107
Pattern recognition receptors [BR:
pgeo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117442107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
LRR_6
SPRY
DFF-C
LRR_4
Motif
Other DBs
NCBI-GeneID:
117442107
NCBI-ProteinID:
XP_033934002
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MDTTDPKIHREGPDPPGPGPSCVSMKSENSTPRFIDFKDGKHDDSLEIHHQRPDYPGPSS
DSMESESTQPPSFEDGEHSDGSRVHQQRSEGPGGQSAQQLQTDLDSIFMLLEDHIVTFVK
NELKKIQIVLTSDYPECLESQSEDEEVLDSEDEEQSSREAFLNISLHFLRSMKQEELADR
LQSKTAAAVCRRNLKSTLKEKFQCVFEGIAKAGNPTLLNQTYTELYITEGGSAEVNKEHE
VIQIETASRKPDRPETTIRQEDLFKASPGRDAPIRAVLTKGVAGIGKTVFTQKFTLDWAE
GKANQDIQFIFPFTFRELNVVRENKYSLVELVHHFFPETRDAGICRFDQFPVVFIFDGLD
ECRLPLDFLNTEVLTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVDM
VTEVRGFTDPQKEEYFRKRFRDQEQAGTIISHIKTSRSLHIMCHIPVFCWISASVLEEVL
KTREGGELPKTLTEMYIHFLVVQSKVKNIKYDGGAETDPHWSPESREMMVSLGKLAFEQL
LKGNLIFYESDLTECGIDIRAASVYSGVFTQVFREERGLYQDKVFCFVHLSIHEFLAALH
VHLTFITSGVNLLAEEPTTSWWPKVKPTLTNLYQSAVDQALQSPNGHLDLFLRFXLGLSL
QTNQKLLRGLLSKTGSGSETNQETVQYIKKKMDEDLSPERSINLFHCLNELNDRSLVEQI
QQSLSSGRLSTDSLSPAQWSALVFILLSSGEDLDVFDLKKYSASEEALLRLLPVVKASRK
ALLSDCKLSERSCEALSSVLSSQSSSLRDLDLSNNDLQDSGVKKLCAGLESPHCELETLR
LSGCLVTKEGCASLASALFPSHLRELDLSYNHPGDSGVKLLSFLLESPLWRLETLRTDQC
GEHRFKPGVRKYACELTLDPNTAHRELKLSDCNREVTCVREKQKYPDHPERFDYWEQLMC
REALTGRCYWEVEWRGRVHISVTYRGIRRRGGRENSQFGGSDQSWSLKCSDGEFSLRHNN
TVLPLSPPPSSSSSSSSSSSSSSSSSSSSGRVAVYLDHPAGSLSFYRVSSDTLTHLHTIR
TTFTEPLYAGFGLWSHDSSVSLCPL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggacaccactgatccaaagatccaccgtgagggaccagaccctcctggacctggaccc
agctgtgtgtccatgaagagtgaaaactctacgcctcgatttattgattttaaagatgga
aagcatgatgatagtctcgagatccaccatcagagaccagactatcctggacccagctct
gattccatggagagtgaatcgactcaacctccttcgtttgaagacggagagcatagtgat
ggatcaagagttcatcagcagagatcagagggtcctggtggtcagtctgcccagcagctt
caaactgacctggactccatatttatgctgctggaggaccacatcgtcacttttgtgaag
aacgagctgaagaagatccagatagtcctgacttcagattacccagaatgcttagagagt
cagagtgaggacgaggaggtgctggacagtgaggatgaagagcagagcagcagagaggcc
tttctgaacatctcactgcacttcctgaggagcatgaagcaggaggagctggctgaccga
ctgcagagcaaaactgctgctgcagtctgcagacgtaatctcaaatccaccctgaaggag
aagttccagtgtgtgtttgagggcattgctaaagcaggaaacccaacccttctgaaccag
acctacacagagctctacatcacagagggggggtctgcagaggtcaacaaggaacatgag
gtcatacagattgaaacagcatccaggaaaccagacagaccagaaacaaccatcagacaa
gaagacctcttcaaagcctcacctggaagagatgcaccaatcagagcagtgctgacaaag
ggcgtggctggcattgggaagacagtcttcacacagaagttcactctggactgggctgaa
ggcaaagccaaccaggacatccagttcatatttccattcaccttcagagagctgaatgtg
gtgagagagaacaagtacagcttggtggaactcgttcatcacttcttccctgaaaccaga
gacgcaggaatctgcaggttcgatcagttcccggtcgtgttcatctttgacggtctggat
gagtgtcgacttcctctggacttcctcaacactgaggtcctgactgatgtcacagagtcc
acctcagtggatgtgctgctgacaaacctcatcagggggaagctgcttccctctgctcgc
ctctggataaccacacgccctgcagcagccaatcagatccctcctgagtgtgtggacatg
gtgacagaggtccgagggttcactgacccacagaaggaggagtacttcaggaagaggttc
agagatcaggagcaggccggcaccatcatctcccacatcaagacctcacgaagcctccac
atcatgtgccacatcccagtcttctgctggatctctgcttcagttctggaggaggtgttg
aaaaccagagaggggggagagctgcccaagaccctgactgagatgtacatccacttcctg
gtggttcagtccaaagtgaagaacatcaagtatgatggaggagccgagacagatccacac
tggagtccagagagcagggagatgatggtgtctctggggaaactggcttttgagcagctg
ctgaaaggcaacctgatcttctacgagtccgacctgacagagtgtggcatcgatatcaga
gcagcctcagtgtactcaggagtgttcacacaggtcttcagagaggagagaggactgtac
caggacaaggtgttctgcttcgtccatctgagcattcacgagtttctggctgctcttcat
gtccatctgaccttcatcacctctggagtcaacctgctggcagaagaaccaacaacctcc
tggtggcctaaagtcaaacctacactaacaaatctctaccagagtgctgtggaccaggcc
ttacagagtcccaacggacacctggacttgttcctccgcttcntcctgggtctttctctg
cagaccaatcagaaactcctacgaggcctgctgtcaaagacaggaagtggctcagagacc
aatcaggaaacagtccagtacatcaagaagaagatggatgaggatctgtctccagagaga
agcatcaacctgttccactgtctgaatgaactgaatgatcgttctctagtggagcagatc
caacagtccctgagttcaggacgtctctccacagatagtctgtctcctgctcagtggtca
gctctggtcttcatcttactgtcatcaggagaagatctggacgtgtttgacctgaagaaa
tactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaggaaa
gctctgctgagtgactgcaagctgtcagagagaagctgtgaagctctgtcctcagtcctc
agctcccagtcctctagtctgagagatctggacctgagtaacaacgacctgcaggattca
ggagtgaagaagctgtgtgctggactggagagtccacactgtgaactggagactctcagg
ctctcagggtgtctggtcacaaaggaaggctgtgcttctctggcctcggctctgttcccc
tcccacctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctg
ctgtcttttctactggagtctccactctggagactggagactctcaggaccgaccagtgt
ggagagcacaggttcaaacctggtgtgaggaaatatgcctgtgaactcacactggaccca
aacacagcacacagagaactcaaactgtctgactgcaacagggaggtgacatgtgtgaga
gagaagcagaaatatcctgatcatccagagaggtttgactactgggaacagctgatgtgt
agagaagctctgactggtcgctgctactgggaggtcgagtggagaggaagggttcatata
tcagtgacttacagaggaatcaggaggagaggaggcagagagaactctcagtttggaggc
agtgatcagtcctggtctctcaagtgctctgatggagagttttctctcagacacaataac
acagtcctgcctctctccccccctccctcctcctcctcctcctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctctggtagagtagcagtgtatctggatcatcctgct
ggctctctctccttctacagagtctcctctgacacactgacccacctccacaccatcaga
accacattcactgaacctctgtatgctgggtttgggctctggtcacatgactcctcagtg
tctctgtgtcctctgtag
DBGET
integrated database retrieval system
