Pseudochaenichthys georgianus (South Georgia icefish): 117442236
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Entry
117442236 CDS
T09629
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117442236
Pattern recognition receptors [BR:
pgeo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117442236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
WHD_NOD2
PRY
LRR_4
SPRY
Motif
Other DBs
NCBI-GeneID:
117442236
NCBI-ProteinID:
XP_071058483
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MDLEPGPKPGPGPEPGPESSKSDRSMEPQSADGGVQQQRPDSPSCLSFKSDWSKEAIITF
KERPPSADQRVQQQRADSPSCLSFKSDSSKEDFINFKERPPSADQRVQQQRPDSPSCLSF
KSDWSKEAIITFKERPPSADQRGDQESSEVPGGQSAQQHQTQLDSIFTLLEDHVVSFVKS
ELKKFQKTLGSDYPECLESEDEEGLEAEDEEQRSSREAFLNITLHFLRSMEQEELAERLH
HRTFAAECQRKLKSTLKERFQCVFEGIAKAGNPTLLNQIYTELYITEGGSAEVNKEHEVR
QIETASRKPHRPETTIRQEDLFKASPGRDAPIRAVLTKGVAGIGKTVFTQKFTLDWAEGK
AHQDIQFIFPFTFRELNVVRENKYSLVELVHHFFPETRDAGICRFDRFPVVFIFDGLDEC
RLPLDFLNTEVLTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVHMVT
EVRGFTDPQKEEYFRKRFGDQEQAGTIISHIKTSRSLHIMCHIPVFCWISASVLEEVLKT
REGGQLPKTLTEMYIHFLVVQSKVKNVKYDGGAETDPHWSPESRKMMEALGKLAFEQLQK
GNLIFYESDLTECGIDIRAASVYSGVFTQVFREERGLYQDKVFCFVHLSVQEFLAALHVH
LTFISSGVNLLSEEPATSRWRKVFRPKPELTHLYQSAVDQALQSPNGHLDLFLRFLLGLS
LQTNQKLLRGLLTQTGSGSETNQETVQYIKEKMDEGLSAERSINLFHCLNELNDRSLVEE
IQQSLSSGRLSTDSLSPAQWSALVFILLSSEEDLDVFDLKKYSASEEALLRLLPVVKASR
KALLSGCELSERSCAALSSVLSSQSSSLRDLDLSNNDLQDSGVKLLSAGLESPLCELETL
RLSGCKLSERSCAALSSVLSSQSSSLRDLDLSNNDLQDSGVKLLSAGLESPLCELKTLRL
SVCKLSERSCAALSSVLSSQSSSLRDLDLSNNDLQDSGVKLLSAGLESPLCELKTLRLSG
CKLSERSCAALSSVLSSQSSSLRDLDLSNNDLQDSGVKLLSAGLESPLCELETLRLSGCL
ITEEGCDALASALNPSHLRELDLSYNHPGASGGRLLSAGLDTLSLEPAAVRFLRPGLRKY
SCGLTPDSNTVSRDLRLSEDNRTVTWEREEQNYPDHPERFESWPQLMCREALTGRCYWEV
ERRGRVSISVTYRGIRRRGGGGDGGFGGNDQSWSLECSPRGYSVWHNERGTSTSPPPPPP
PPPPPPPPPPPPPPPPPPPSSSSSSGRVAVYLDHPAGSLSFYRVSSDSLTHLHTFRTTFT
EPLYAGFGFWFFGSSVSLCALQE
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaacctggacccaaacctggacccggacctgaacccggacctgagtcctct
aagagtgaccgctcaatggagcctcaatctgctgatgggggggtccagcagcagagacca
gactcccccagctgtctgtccttcaagagcgactggtcgaaggaggccatcataaccttt
aaagaacgacctccatctgctgatcagagggtccagcagcagagagcagactctcccagc
tgtctgtccttcaagagcgactcgtcgaaggaagacttcataaactttaaagaacgacct
ccatctgctgatcagagggtccagcagcagagaccagactcccccagctgtctgtccttc
aagagcgactggtcgaaggaggccatcataacctttaaagaacgacctccatctgctgat
cagagaggggaccaggagagctcggaggttcccggtggtcagtctgcccagcagcatcag
acacagctggactccatattcacgctgctggaggaccacgtcgtctcctttgtgaagagc
gagctgaagaagttccagaagactctgggttcagattacccagaatgcttagagagtgag
gatgaggaggggttggaggctgaggatgaagagcagaggagcagcagagaggcattcctg
aacatcacactgcacttcctgaggagcatggagcaggaggagctggctgagcgtctgcac
cacagaacctttgctgcagagtgtcagcgtaaacttaagtccaccctgaaggagaggttc
cagtgtgtgtttgagggcatcgctaaagcaggaaacccaacccttctgaaccagatctac
acagagctctacatcacagagggggggtctgcagaggtcaacaaggaacatgaggtcaga
cagattgaaacagcatccaggaaaccacacagaccagaaacaaccatcagacaagaagac
ctctttaaagcctcacctggaagagatgcaccaatcagagcagtgctgacaaagggcgtg
gctggcattgggaagacagtcttcacacagaagttcactctggactgggctgaaggcaaa
gcccaccaggacatccagttcatatttccattcaccttcagagagctgaatgtggtgaga
gagaacaagtacagcttggtggaactcgttcatcacttcttccctgaaaccagagacgca
ggaatctgcaggttcgatcggttcccggtcgtgttcatctttgacggtctggatgagtgt
cgacttcctctggacttcctcaacactgaggtcctgactgatgtcacagagtccacctca
gtggatgtgctgctgacaaacctcatcagggggaagctgcttccctcggctcgcctctgg
ataaccacacgacctgccgcagccaatcagatccctcctgagtgtgtgcacatggtgaca
gaggtccgagggttcactgacccacagaaggaggagtacttcaggaagagattcggagat
caggagcaggccggcaccatcatctcccacatcaagacctcacgaagcctccacatcatg
tgccacatcccagtcttctgctggatctctgcttcagttctggaggaggtgttgaaaacc
agagagggaggacagctgcccaagaccctgactgagatgtacatccacttcctggtggtt
cagtccaaagtgaagaacgtcaagtatgatggaggagctgagacagatccacactggagt
ccagagagcaggaagatgatggaggctctggggaaactggcttttgagcagctgcagaaa
ggcaacctgatcttctacgagtccgacctgacagagtgtggcatcgatatcagagcagcc
tcagtgtactcaggagtgttcacacaggtcttcagagaggagagaggactgtaccaggac
aaggtgttctgcttcgtccatctgagcgttcaggagtttctggctgctcttcatgtccat
ctgaccttcatcagctctggggtcaacctgctgtcagaagaaccagcaacctccaggtgg
cgtaaagtcttcagacccaaacctgaactaacacatctctaccagagtgctgtggaccag
gccttacagagtccaaacggacacctggacttgttcctccgcttcctcctgggtctttct
ctgcagaccaatcagaaactcctacgaggcctgctgacacagacaggaagtggctcagag
accaatcaggaaacagtccagtacatcaaggagaagatggatgagggtctgtctgcagag
agaagcatcaacctgttccactgtctgaatgaactgaatgatcgttctctagtggaggag
atccaacagtccctgagttcaggacgtctctccacagatagtctgtctcctgctcagtgg
tcagctctggtcttcatcttactgtcatcagaagaagatctggacgtgtttgacctgaag
aaatactctgcttcagaggaggctcttctgaggctgctgccagtcgtcaaagcctccagg
aaggctctgctgagtggctgtgagctgtcggagagaagctgtgcagctctgtcctcagtc
ctcagctcccagtcctccagtctgagagatctggacctgagtaacaacgacctgcaggac
tcaggagtgaagctgctgtctgctggactggagagtccactctgtgaactggagactctc
aggctgagtggctgcaagctgtcggagagaagctgtgcagctctgtcctcagtcctcagc
tcccagtcctccagtctgagagatctggacctgagtaacaacgacctgcaggactccgga
gtgaagctgctgtctgctggactggagagtccactctgtgaactgaagactctcaggctg
agtgtctgcaagctgtcggagagaagctgtgcagctctgtcctcagtcctcagctcccag
tcctccagtctgagagatctggacctgagtaacaacgacctgcaggactccggagtgaag
ctgctgtctgctggactggagagtccactctgtgaactgaagactctcaggctgagtggc
tgcaagctgtcggagagaagctgtgcagctctgtcctcagtcctcagctcccagtcctcc
agtctgagagatctggacctgagtaacaacgacctgcaggactcaggagtgaagctgctg
tctgctggactggagagtccactctgtgaactggagactctcaggctgtcaggctgtctg
atcacagaggaaggctgtgatgctctggcctcagctttaaacccctcccatctgagagag
ctggacctgagctacaatcatccaggagcctcaggggggaggctgctgtctgctggactg
gacacgctcagcctggagcctgctgcagtccggttcttgaggccaggcctcaggaagtat
tcctgtggactcacaccggactccaacacggtgagcagagacctccgactgtctgaggac
aacaggacggtgacatgggagagagaggagcagaactatcctgatcatccagagaggttt
gagtcctggcctcagctgatgtgcagagaagctctgactggtcgctgctactgggaggtc
gagaggagaggaagggtttctatatcagtgacttacagaggaatcaggaggagaggaggg
ggaggggacggtgggtttggagggaatgatcagtcctggagtctggagtgctctcccaga
ggttactctgtctggcacaatgagagaggaacaagcacctctcctcctcctcctcctcct
cctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctccctcc
tcctcctcctcctctggtagagtagcagtgtatctggatcatcctgctggctctctctcc
ttctacagagtctcctctgactcactgacccacctccacaccttcagaaccacattcact
gaacctctctatgctggctttgggttctggttctttggttcctcagtgtctctgtgtgct
ctgcaggagtga
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