Pseudochaenichthys georgianus (South Georgia icefish): 117442250
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Entry
117442250 CDS
T09629
Symbol
ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117442250 (ift57)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
117442250 (ift57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
HBM
Laminin_I
MCPsignal
Mod_r
Adhesin_P1_N
NET2A_C
Sec10_N
Exonuc_VII_L
Spectrin_1st_PEPL
DUF4407
ISG65-75
WXG100
Med9
DUF745
Motif
Other DBs
NCBI-GeneID:
117442250
NCBI-ProteinID:
XP_033934140
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MAEEGRRGEEDGGPGAAHQVFVVMESLLEKLKVLNYEEEILAKHNMKNLSRHYFVSSPFL
AVNPGEQFFLFTVIAAWLINEAGRPFTAPQEHDEPNATVSNILSELRAFGVKVDFPPSKL
KSGSGEFVCLVLDRLAEEALKRKGFSFRRPDYPAETTEEESVVEDDAELTLSKVEEETIE
EPDDEEENVMDLEALKLRTCPTDAEASSKPEEILEATVDAAEWSLEVERVLPQLKVTVRT
DNKDWRIHVEQMHQHRDGIKSSLKEATSYLDRLQEDVGKTLEKVSSREKYINNQLESLIQ
EYRGAQARLSQAKERYQQASGGVTERTRVLAEISEELEKVKQEMEEKGSSMSDGAPVVKI
KQSLTKLKQEIIQMDVRIGVVEHTLLQAKLKEKSNMTRDMNATNLPEPATGPFA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagggcaggcgaggcgaggaagatggcggccccggagcggctcaccaggtc
ttcgtggtgatggagtctctgctggagaagttaaaggtgttgaactatgaggaggagatc
ctggccaaacacaacatgaagaatctgtcccgacactacttcgtctccagcccgttcctg
gcggtgaacccgggcgagcagttcttcctgttcactgtcatcgccgcctggctcatcaac
gaggcggggcggcccttcacggcgccgcaggagcacgacgagccgaacgccaccgtgtcc
aacatcctgtccgagctgcgggccttcggtgtgaaggtggacttcccgccctccaaactg
aagtccgggtcaggagagttcgtgtgcttggtgttggaccgcctggccgaggaggctctg
aagaggaagggcttctccttcaggagaccagactacccagcagaaaccacagaagaagag
tcggtggtcgaggacgacgcggagctcacgctcagcaaagtggaggaggagacgatcgag
gagcctgacgacgaggaggagaacgtgatggacctcgaggctctgaagctacgcacctgt
cccacggatgcagaagcgtcctccaagccagaggagatcctggaggccacggtggacgcc
gcggagtggagcctggaggtggagagagtcctgccgcagctcaaagtcaccgtccggacc
gacaacaaggactggaggatccacgtggagcagatgcatcagcacagagacgggatcaag
tcctcgctcaaagaagccacgagctacctggacagactgcaggaagacgtcggcaagact
ctggagaaggtgagcagccgagagaaatacatcaacaaccagctggagagcctgatccag
gagtaccgcggcgcccaggccagactcagccaggcgaaggagcgctaccagcaggccagc
ggaggagtcactgagaggaccagagtgctggcagagatcagcgaggagctggagaaggtg
aagcaggagatggaggagaaaggaagcagcatgtctgacggggctcccgtggtgaagatc
aagcagagtttgacgaagctgaagcaggagatcattcagatggacgtgaggatcggcgtc
gtcgagcacacgctgctgcaggcaaaactcaaagagaagtccaacatgacgcgagacatg
aacgccaccaacctcccggagcccgcaaccgggcccttcgcttag
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