KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117442322
Entry
117442322         CDS       T09629                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117442322 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgeo03400]
    117442322 (aptx)
Enzymes [BR:pgeo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     117442322 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     117442322 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     117442322 (aptx)
DNA repair and recombination proteins [BR:pgeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     117442322 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     117442322 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT zf-C2H2_6 FHA zf-C2H2_4 zf-C2H2
Other DBs
NCBI-GeneID: 117442322
NCBI-ProteinID: XP_033934243
LinkDB
Position
1:22508681..22514407
AA seq 333 aa
MPICWLISEDGNHKPIRLPHLQTVVLGRGPETTIKDKKCSRHQVELKAECNKGYVKVKQL
GLNPTSIDSVVVGKDSEVKMKAGQKLHIVNQLYPYTVQFKEDTTGGHGGNKTPREMASEE
RESHREALSVKAAKQTENTSVPDSLGENIKNTESFAPWSQGLKTSMQDPKMQVYKDDKVV
VIKDKYPKARYHWLVLPWQTISSLKALREEHCDLVKHMHQVAEQMVQQCPDATSLRFRTG
YHAIPSMSQVHLHVISQDFDSPSLKNKKHWNSFTTDYFMDSQDVIQMLETDGKVTVKEGT
SELLKLPLRCHICRKELPTIPALKEHLKSHLPR
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgccgatttgctggcttatcagcgaggatggcaatcataaacccatccgactgcctcac
ttgcagactgtggtcctgggtcgaggtccagagacgactattaaagacaaaaaatgctct
cggcaccaagttgaattgaaagcagaatgcaacaagggttatgtcaaagttaaacagctg
ggcttgaacccaacatccatagactctgtggtggtgggtaaggacagtgaggtcaaaatg
aaggccggacagaagcttcatattgtcaaccagctctacccatacactgtacagttcaag
gaggataccaccgggggccacgggggaaacaaaacaccccgagagatggcttcagaggag
agagagagccacagagaggctctgagtgtgaaagcagccaaacagacagaaaatacctct
gtgccagacagcctgggagaaaacataaaaaacacagaaagttttgcaccttggagccaa
ggcctgaagacctcaatgcaagacccaaagatgcaggtgtataaggatgataaagtagta
gtcattaaagataaataccccaaagctcgctaccactggttggtcctcccgtggcagacc
atttccagcctgaaagccttgcgagaagagcactgcgatctggtgaaacacatgcatcaa
gtcgctgagcagatggttcaacaatgcccagatgctacatcattacgcttccgcaccggg
taccatgccatccccagtatgagtcaagtacacctgcatgtgatcagccaagactttgac
tccccttctttaaagaacaagaaacactggaactcattcacaactgactatttcatggac
tcccaagatgtcattcagatgctggaaacagatgggaaagtaaccgtcaaagaaggaacc
agcgagttattgaaacttcctctccgctgtcacatctgtcgtaaagagcttcccaccata
ccagcactaaaggaacacctgaagtctcacctccccagataa

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