Pseudochaenichthys georgianus (South Georgia icefish): 117442499
Help
Entry
117442499 CDS
T09629
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117442499
Membrane trafficking [BR:
pgeo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117442499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_1
SH3_1
TPR_8
TPR_7
SH3_9
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
117442499
NCBI-ProteinID:
XP_033934394
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
MSSRPDQDTGRYRKKSSTEGQHREEKSLRHGRIVRGFSRDSASLKRTVSICEENFPTALP
VLLDVVGGPESLPADEQTQEMLRGKLRILQADSTEVNALFMELSTHLISINSEENIMFVT
FKTFEEIWKFTTYYTIGLLGRCMEGLLLDQRFCLSSLKEDIRIQVSIQEETLSLIYKGIL
MQEGSFFASCSTNQMFDSSTSGGDLYLEQGDIAQFEPPFLGSGWTMLCLADGGRGTAPRP
AVKPVVPFYQWFLKSCAEGILVGDGKPSCDFPLQLARGTCLATMEYDAGGPDEMSVAPGD
RIIIVGLLVSCFEWFTGRKEATGEVGLVKTSLVEPSTDITQSEDIFLDGEERTLFSVQED
KVLEETTALLQKKSQYDTGQKYKLDTMSCQDSEKQNHVFGTSSKVDAQTDLKRNIQRILD
QGKHSSPDPVVSVNGTLKEPRLATESKNPIPPCFTVHPVVEGNTNTENFIPLLSFLEGRD
YRAEFGVLYGLGSELLASSIFTGHSDEDELIAFLGVARETARKKRLYWPHTRLCFLLGKL
CAGRLKFSQARVYMEEALSVPREGFTDLRLLASIYSRLVPIYLLQKNTESFFALAERLAA
LLFGIPDCLACLEDNSALKYILKKAVLSHNQMAEARACYQLAKHHLTHAEGLRVVPYLER
LLVLSGEAQRTWGTSPSQEYLTLGRMYSELQLPHLSVSSARRASLQPCATLTDCLSSMAL
AMHNVNRLYAFTEQEAPVPPEVAPYLHQALSSIQGEGSDRYHVLGHRIAVCLSQLFCKNS
MVGQAICRMHTLINNTGRSLCISVPERNSALTWLAWLHIDNHQPDVALDVLDLVLASMPE
HCTTPQEGVVLNMRGVALRYMGDLRRAAESYQAAVDICQEYEDMPNWAVAQANLGLLCLK
AGAKGLAQRHLTEAVQLFSELEEGGHEADFITVLLELGQHYVKQQQLDFGKGCYEWALLL
ALNANLLDCQLSATRHLSLLYGCESPDQAQCIVYSQHQVALLQSTGDRGQEGEALEAISQ
LFLNLGTERAYRAALDYTKTSLGISIDLGCREKEAYGWLQAGRIYHLVQQTELVDLYVQV
AQDVALSTGDTQFILKLLEAAGDIFFNSSRDRDKAITFYRDRALPVAVKSNSVRSRLRLC
NKLTELMLSLKLYGEAVEFAQTALDISITLGDSLNERVAHHRLASLFHRLEQFELAEHYY
LKTLTLCPTPLMFDEETLYYARVYQTLGDIIFYDLKDPHDAAGYYHLALAAAMDLGNKRS
QLQLCTRLATIYHNFLTDRELSLFFYQKARAFAAELNVRRINISPDQQLSSASQYKTNRP
YGRKI
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccggccggaccaagacaccggcaggtatcggaagaagagctctaccgaaggc
cagcaccgggaggagaagtcactccggcacggcagaatagtgcgtggattctccagagat
tctgcaagtctgaagagaactgtctccatatgtgaggaaaacttcccaacagctctgccc
gtgctgctggatgtggtcgggggtcccgagagtcttcctgcagacgagcagacacaggaa
atgctgagagggaaactgcgcattctgcaagctgacagcaccgaggtcaacgctctgttc
atggagctgtctactcatctgatctccatcaacagtgaagaaaatataatgtttgtcaca
ttcaaaacatttgaagaaatatggaagttcaccacatattacactatcggtctcctgggg
cgctgcatggagggtctgctgttagaccagaggttttgtctcagttctctgaaggaggac
atcaggatccaggtctccattcaggaggagaccctcagcctgatctacaaaggcatcctc
atgcaggaagggtctttctttgctagctgtagcaccaaccagatgttcgacagctccacc
tctggaggggacctgtacctggagcagggggacatagcccagttcgagccccccttcctg
ggctcagggtggaccatgctctgcctggctgatggaggccgaggcactgctcccagacct
gctgtgaagcccgtcgtccctttctatcagtggtttctcaaatcctgtgcagagggcatt
ttagttggtgatgggaaaccctcctgtgacttccctctgcagttggccagaggaacctgt
cttgccacaatggagtacgatgctgggggcccagatgagatgagcgtggcccctggtgat
cgcatcatcatcgtgggacttctggtgtcttgttttgagtggttcacagggaggaaggag
gccacaggagaagtgggtctggtgaagacaagcctggtggaaccctccactgacatcacc
cagtcagaagatatttttttggatggagaggaaagaacactcttcagtgtgcaagaggac
aaagtcttagaggaaacaactgcgttactgcagaagaaatcccaatatgataccggtcag
aaatacaaacttgatacgatgagttgccaagactctgagaaacaaaatcacgtattcggc
acttcaagcaaagttgatgctcagactgaccttaagagaaatattcagaggatacttgat
cagggaaagcactcctcaccagatcccgtagtgagcgttaacgggactctaaaggaaccg
cgccttgcaacagaatcaaagaaccccatccctccgtgcttcacggtccacccagtggtc
gaaggaaacaccaataccgagaacttcatccccctcctctctttcctggagggacgagac
tacagagcagagtttggcgtcctgtatggactgggttcagaactcctcgcctcctccatc
ttcaccggtcactctgacgaggatgagttgattgccttcctgggtgttgctagggaaaca
gccaggaagaagcgactctattggccgcatactcggttgtgttttctgttgggtaagctt
tgtgctgggaggttgaagttcagccaggcccgggtgtacatggaggaagccctcagcgtg
ccacgagagggcttcacggacctcaggttgttggccagcatctactccagactggttccc
atttacctcctgcagaaaaatactgagagtttctttgctctggccgaacgactcgctgcc
ttgctatttggaatcccagactgcctggcgtgtttagaagacaactccgctcttaaatac
atcctcaagaaagctgttctatctcacaaccaaatggcggaggcccgggcttgttaccaa
ttggcgaagcaccacttgactcatgctgaaggattgcgagttgttccttatctcgaaaga
ctacttgttctttctggtgaagctcaaaggacttgggggacctctcccagccaggagtac
ctcacactgggaaggatgtacagtgaactccagctcccccacctcagtgtgagttcagcc
aggagagcctctctgcagccctgtgccacactgacagactgtctcagcagcatggcgcta
gctatgcacaatgtcaacagactgtatgcgttcacagaacaggaagcgcctgtcccgcct
gaagtggctccatatttacaccaggccctttcttctatccaaggagaaggaagtgatcga
taccatgttctgggtcatcggattgctgtttgtctcagccaactgttctgcaagaactca
atggttggacaggccatctgccgcatgcatactctgatcaacaacaccggacgctcactc
tgcatctccgtcccagagagaaacagcgccctcacctggctggcatggcttcacattgac
aatcatcagccagatgttgctttggatgtcctggatctggtcctagcttccatgccagaa
cactgcacgacccctcaggaaggtgtggtcctcaacatgcgtggtgttgcacttcgatac
atgggtgacctccggagggcagcagagagctatcaggctgctgtggacatctgccaagag
tatgaggacatgccaaactgggctgtagctcaggctaacctagggctgttgtgtctgaag
gctggagctaaaggtctagcccagagacacctgacggaggctgtgcagctcttctctgag
ctggaggaaggagggcatgaggctgacttcatcaccgtgctgctggagctgggtcagcac
tatgtgaagcagcagcagctggactttgggaaaggatgctacgagtgggctcttctgcta
gctctcaacgctaacctgctagactgccagctctctgcgacccgacacctgagccttctg
tacgggtgtgagagcccggaccaggcccagtgcatcgtctacagccagcaccaggtggcg
ctgctgcagagcacaggggaccggggtcaggagggggaggcactggaggccatcagccag
ctgttcctcaacctgggcacagaacgggcctacagggcggctctcgactacaccaagacc
agtctgggtatctccatcgatctgggctgcagagagaaggaggcgtacggctggctgcag
gcggggaggatctaccacctggtgcagcagacggaactggtggacctgtatgttcaggta
gcgcaggatgtcgctctgagtacaggagacactcagttcatcctgaagcttctggaagct
gcaggagacattttcttcaacagcagcagggaccgggacaaagccatcaccttctacagg
gaccgcgccctgcccgtcgcagtgaagagcaacagtgtccgctccaggctgaggctgtgt
aacaagctgactgaactgatgctcagtctcaagctctacggagaagctgttgagttcgcc
cagactgcactggacatcagtatcacactgggtgatagtctgaatgagcgagtggctcac
caccgcctggcctccctcttccaccgtctggaacagtttgagctagctgaacactattac
ttgaagaccctgaccctctgtccaacccctctgatgttcgatgaagaaacactgtactac
gcccgggtgtaccagacactgggggacatcatattctatgacctcaaggaccctcatgac
gctgcaggctactatcacctggccctggctgcagccatggatctgggcaacaagcggtcc
cagctgcagctgtgcacccgcctggccaccatctaccacaacttcctgaccgaccgggag
ctctcgctcttcttctaccagaaggccagagcgtttgctgccgagctgaacgtgaggagg
atcaacatctctccggatcagcagcttagcagcgcctcgcagtacaagaccaacagacca
tatggaaggaaaatctaa
DBGET
integrated database retrieval system
