Pseudochaenichthys georgianus (South Georgia icefish): 117442552
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Entry
117442552 CDS
T09629
Name
(RefSeq) polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117442552
04091 Lectins [BR:
pgeo04091
]
117442552
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117442552
Lectins [BR:
pgeo04091
]
C-Type lectins
Others
117442552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
SUEL_Lectin
REJ
Ion_trans
GPS
PKD
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
117442552
NCBI-ProteinID:
XP_033934401
LinkDB
All DBs
Position
3:36522262..36541190
Genome browser
AA seq
2494 aa
AA seq
DB search
RLSVWKHISAAHGRTQQKPVEAGEQTREDTEALSCPESQEGFDGSCYEFVGLQRSFLSSQ
GWCERGGGHLAFILNDETQQFLQKHLDPEKEWWLGLAPAAPNLTIDSAATNGSLAWLDGS
DVSYSNWVNMPDADAACGHILKQSGFQWEAAGNCSQELNFICQFDSGRSIACDGQNATVQ
CGSGQLVEIDDSFYGRKTIHYCRLNPAASPTSSQEECSWIDVTDSVKANCQGLQACQAPV
DLSSLGEPCPALGSYLSVEYTCKHGLHLLLSKLAAVFDNVPITVKWLLHPFQGNLTCTLN
AGDGHNIDPYSPEEMESTVMHTFNRPGVFMVVVECTTKDYRVTAQKAITIQEPVKDVGVI
KCFSRNMSTDGTKCNALNGRPVKIQVIVTAGTNVSYSIQHEGHLVANSSAERGMEPHNMT
LSAGLVEKLGPGCHNLTLTASNRVTAHALTTDLGLCLLEPIEGLQASVIAEDDECPDSTD
LIIGVSVERGAPVELLFTLTGARDTLSETRDMLNGSLQAYTFISPLEGLLKVKVRAMNAF
SDSDVEVDLENIVRACLNYSDSTPDKQENGTGSVSTNDLKITAAPDTVVDYSQSVTLSAT
GTESLSSKGLTFEWKCKGNCKCKNKTKDETHVIEKNCLPNPFDFFNYTLTVRRTTWFREW
VDFASASKCITVAPKEFKDVTISCDDCASLNVNDNVSLRLRCETTCPDVVWYIEDPKPAT
DDLETCYSEAGRKPPIERQEGITEYVVHSQHLKVSRETSHNISVIAYGQNEPGFAKYTLP
VPGPEPTEPAATDAPAELSPPSCSISPESGTVLDAFDITCQASSFCSTGCLYCFKTDTGK
HLRCSNANEVKSVFLPLGDTNNNYSLSVVVTVKNEYKKATTTVSTQVRKSSSSKSVEALQ
SAVEDSLSHLEQQGLLSGEALGQMFTSVSDMLNTEDDKDQKDARTELRKHMLTKMTKVLL
DSPSNTTQEVQVTARAVAGLTQRPDELTPAAQEEAGSLLADLSFSLNIISVNQEDGDDGE
VVQAATPIVEAASNILNVSSNKKVSDFLLTGIGNVQSALLNNKKLNGDPAIIESGQISVY
VNRVSSEKMHLQDINVQKNSSSRFSFPKLPAHIVSPEEPVDVRMMSFEKNPYSWKGGNIT
GTVGSVSLTRVNGTVIPVENLPDEIEILLPRLDVGQENSTVLDLANYSTLIIDVPSPDVT
LVLKMELSENISFVIFLGFKDYPNNENYIAKTQFPLENAKEEEKYTWVLSPKDRGGEVGE
HYLVMKPIIEPGVTSINATVTVISIAAQCKYWNETDTSWNEDGCRVGPLTTPLVTQCLCN
HLTFFGSSFFVMPNLVDVSRTAELFATFTTNPVVVCFVGAIFAAYFLVVVWARRKDIQDS
AKVKITVLEDNDPLAEYRYMLNISTGHRHGASTSSQVTITLLGTEGESDPHHLTDHEKPV
FERGGGDMFLLTTHFSLGDLQSIRLWHDNSGAHPAWYVNKVTVQDLENGQKWHFLCNSWL
AVDVGECSLDKVFPVATEMDLKQFSNLFFMKTAKDFRDGHIWFSVISRPPCSTFTRVQRV
SCCFSLLLCTMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQVMIGIQSSIIMFPINLLIVS
IFRNTRPREKGAKTDPSKQGKTGRVSPKETSSPQKELKDITPDTVIKDIKRIAQSLSKAM
KSPLPHLELRPGHQTDINTLLSLVEDIIRQQNRADGDFYTEASKRERSMILSLRAVNLQE
NSVCGSPERTTEGVQKKSNNSRYLYKQLRHVEKELGLLGPSRFPNPDSFNRAMQQVQGMK
GLLEYHLPSSDLEGEQLDGSLSPDESINGDSTKKRSQGGLPWWFVFIGWILVIATSGVSG
YFTMMYGLTYGKDRSISWLISMLVSFFESLFITQPLKVLGFAAFFALVLKKVDQEEYGEP
QLEDNLRNPDDPDAVRAARRDSTCSFYQPPPPTDIEKIRNNMIKEQKVFALVREILAYMG
FMWMLLLVAYGQRDPNAYFLTQHIQQSFSKGISESMSIRDVFDWANTTLLSNLFGEYPGF
ITDGNSKLVGNARLRQVRVLPNSCHVAPSMQKSVPDCHALYSWEMEDMGSYGPGWSRSEG
NNTSLNLQSPWTYQSQRKLRAYPIWGNVMLYRGGGFVVDLGPDLQNSSRSLQYLYDNTWF
DVYTQAVFVEFTVYNANVNLFCIVTLMLETTALGAFQFRSELQSVRLYQSTGGLHIFVMA
SEAIYFLFIFYYMFIQGKLMKQQRWTYLKSKLNLLELAIIILSWSALSVFIKRTLLGNRD
MDYYQNNKDQYASFHETAKADAVLGYLIAFLVLLATVKLWHLLRLNPKLHMITATLQRAW
TDISGFLVVMTIMFMAYSIASNLMYGWKLYSYRTLMDSAQTMVSLQLGIFNYEEVLDYNP
VLGAFLIGSCIVFMTFVVLNLFISVILVAFTQEQIHHKPSEEEEIVDLMLMKLFSLFGLK
SKKPGGDGLSERPVVSSAPQNGLSTISSGNMCDG
NT seq
7485 nt
NT seq
+upstream
nt +downstream
nt
cgtctgtctgtgtggaaacacatctctgctgcacatggccggacacaacaaaaacctgtg
gaggcaggagaacaaacgagggaggatacagaagctctatcctgcccagaatcccaggag
ggctttgacggctcatgctatgagtttgtgggtctgcagcgatccttcctcagctcccag
gggtggtgtgagcgaggcggaggacacctagccttcatcctaaatgatgaaacccagcag
ttcctccagaagcacctggacccggagaaggaatggtggctcgggctggcacctgccgct
ccaaacctcacgatcgactctgctgccaccaatggttcccttgcctggctggatggctca
gatgtcagctacagtaactgggtaaacatgccagatgcagatgcagcctgtggacatatc
ctaaaacagtcaggttttcagtgggaagcggcaggaaactgcagccaggaactcaacttc
atttgccagtttgattctgggagatctattgcctgtgatgggcagaatgcaacagtacaa
tgtggttcgggtcaacttgtagagatagatgacagcttctatggtcgaaaaacaattcac
tactgccgattaaaccctgctgcctcacccacatcctcccaggaagagtgcagctggata
gatgtgacggattcggtaaaagctaattgccaaggactgcaggcgtgccaggctccagtg
gatctgagctctcttggtgaaccatgtcctgcgctgggaagttacctgtctgtagagtac
acctgcaaacatgggcttcacttgttgttgagcaagctggcggccgtctttgataatgtc
cccatcactgtgaagtggctccttcatccttttcagggaaacctcacatgcacactgaat
gctggagatggccacaatattgatccatacagcccagaagagatggagagcactgtgatg
catacattcaaccgacctggtgttttcatggtcgttgtggagtgcactaccaaagattac
cgtgttacagctcaaaaagcgataaccattcaggagcctgttaaagatgttggtgtcatt
aagtgctttagcagaaatatgtcaacagatggcactaaatgcaacgctctcaatggcagg
cctgtgaagatccaggtgatagtgacagcgggtacaaatgtttcctactcaatccaacat
gaaggccatctggttgcaaactcgtcagcggagagagggatggaaccccacaacatgacg
ctgagtgcaggtttggtggagaagcttggaccgggctgccacaacctgactctgactgcc
tctaacagggtcacagcccacgcactgaccactgatctggggctgtgtctgctggagccc
attgaaggcctgcaggcctctgtgatagcagaggacgacgagtgtcctgactctactgat
ctcatcattggtgtttcggtggagcgaggagcccctgtggagctgctcttcactctgact
ggagccagggacacgctctctgagacaagagacatgctcaatggcagcttacaagcttat
acgttcatcagcccactcgaagggctgttgaaggtgaaggtacgcgccatgaatgccttc
tctgattctgatgtggaagtggacttggagaacattgtccgggcatgcctgaattattct
gactccaccccagataaacaagaaaacgggacaggtagtgtgagtacaaatgatttgaaa
ataactgctgctccggacactgtggttgactactctcagagtgtcacactgagtgcgact
ggaactgaatcattgtccagcaaaggactgacatttgaatggaaatgtaaaggaaactgc
aaatgcaaaaacaaaaccaaggatgaaactcatgttattgaaaaaaattgccttccgaat
ccctttgatttcttcaattacactttaactgtgaggaggaccacctggtttagggaatgg
gttgattttgcatcagcttcaaagtgcattactgtggctccaaaagaattcaaagatgtc
accataagttgtgatgattgcgcttcattaaatgtcaatgacaatgtaagcctcagactg
aggtgtgagacaacctgcccagatgtagtttggtatattgaggacccaaaacctgcgaca
gatgacctcgaaacatgttactctgaagcgggaagaaagccacctattgagaggcaggag
ggaatcactgaatatgttgtgcacagccaacatctgaaggtttcaagggagacttcacac
aacatcagtgtaattgcttatggtcagaatgagccaggttttgccaagtacactcttcca
gtacccggtcctgagccaactgaaccagctgccactgatgctcctgcagagctcagcccc
ccatcatgtagcatctctccagagtcaggaactgttcttgatgcttttgacatcacctgc
caagcaagctctttctgctccacaggctgtttgtattgcttcaaaacagacacaggaaaa
catctgcgctgcagtaacgcaaatgaggttaaatctgtcttcctgcctctcggagatacc
aacaacaattacagtctgtctgttgtggtgactgtgaaaaatgagtacaagaaagccacc
acaactgtctccactcaggtacgtaaaagcagctccagtaagtctgtggaggcactccag
tctgcagtggaggattcgctgagtcacttagagcagcagggtcttctctctggagaggca
ctcggacaaatgttcacttcagtttctgatatgctgaacacagaggacgacaaagatcag
aaggatgcaaggacggagctaaggaagcacatgctgacaaaaatgaccaaagtactgctg
gactcacccagcaacacgactcaggaagtgcaagtgacggccagggctgtggccggactc
acccagcggccggacgagctcacacctgctgctcaagaagaagcaggttcattgttggca
gacctcagcttctcactcaacatcatcagtgttaatcaggaggacggagatgacggagaa
gtcgtgcaggcggctacaccaatagtcgaagcagccagtaatattttgaatgtttcgtcc
aataaaaaagtctcagattttcttcttactgggataggaaatgttcaaagtgctttgctg
aataataaaaagctgaatggagaccctgccatcattgaatctggtcagatcagtgtgtat
gtaaacagagtgtcttcagaaaagatgcatttgcaagacataaatgtccagaagaacagc
tcctccagattttccttccccaaactgcctgctcatattgtctctccagaggagccagtg
gatgtcagaatgatgagttttgagaaaaacccatattcttggaaggggggaaacatcaca
ggaactgttgggtctgtctctctcaccagagtgaacggcactgtcattcctgtagagaat
ttacccgacgagatagagattctcctaccaaggcttgatgttgggcaggagaacagcaca
gtgctagacctggccaattacagcacattaataattgacgttccctctccggatgttaca
ctggtgctaaaaatggagctgtcggaaaacatctccttcgtgatattcctgggatttaaa
gattatccaaataatgagaattatatagccaagacccagttccctctagagaatgccaaa
gaagaggaaaaatacacctgggtgctgagtcccaaagacagaggaggagaagtcggagag
cactacctggtcatgaagcccattattgagccaggcgtaacatccatcaacgccacagtc
actgtcatttccatcgctgcccagtgcaaatactggaatgaaactgacacttcttggaat
gaagatggctgcagggtcggtcctctcaccacgcctctggtcacccagtgtctctgtaac
cacttaactttctttggcagctctttctttgtcatgcccaacttggtggatgtctcacgt
actgcagaactgtttgctacatttaccaccaatcctgtggtggtgtgttttgtgggggca
atctttgctgcttatttcttggtggttgtgtgggcacgcaggaaagacatccaggactca
gctaaggtcaagataacagtactggaggataatgaccccttggcagagtatcgttacatg
ctgaatatcagcacagggcatcggcatggtgcatccacctcctctcaggtgacgataacc
ctgctgggcacagagggagaaagtgacccccaccacctgacggaccatgagaagccagtg
tttgagaggggtgggggggacatgttcctgctgacaacacacttttcacttggagatctg
cagagtatcaggctgtggcacgacaactcaggagctcatcctgcatggtatgtcaacaaa
gtgacggtgcaggatctggagaatggtcagaaatggcacttcctgtgtaactcctggctg
gctgtagatgtgggagagtgctctcttgataaagtgttcccagtagcaaccgagatggat
ttgaagcagtttagtaacctgttctttatgaagacagccaaggattttagggacggccac
atctggttctctgtcattagtcggcctccctgcagcactttcactcgtgttcagcgagtg
tcctgctgtttttccctgctgctgtgcaccatgctgaccagcatcatgttttggggcatc
cccactgacccctctgagcagactatggacctgggtcatatcgagttcacctggcaacag
gttatgattggcattcaaagttcaatcatcatgtttcccattaatctcctgatcgtgagt
atcttcagaaacactcgtcctcgagagaagggcgccaagacggacccatctaaacaagga
aagactggtcgggtttctcccaaagagacgtcttcccctcagaaagagttgaaggacatc
acaccagatactgtgatcaaggatataaagagaattgctcagtcactctctaaggccatg
aagagtcctctgcctcacctggagctccggcctggacatcagacggacatcaacacgctg
ctatctctggtggaggacatcatacggcagcagaaccgtgctgatggagacttttacact
gaggcctctaaaagggaacgctctatgattctcagcttacgagcagttaatctacaagaa
aacagtgtgtgtgggagccctgagaggactacagaaggggttcagaagaagagcaacaac
agtcggtacctgtacaagcagctgcgtcatgttgagaaggagctgggtttgctgggtccg
tctcgctttcccaacccagacagcttcaaccgagccatgcagcaagttcaggggatgaag
ggtctcctggagtaccacctcccctcgtctgacctggaaggagagcagctggacggcagc
cttagtcctgatgagagcatcaacggagactccaccaagaagcgatcccaaggagggctg
ccgtggtggtttgtgtttattggctggattctggtgatcgcaaccagcggcgtgtcagga
tacttcaccatgatgtacgggctgacgtacgggaaggaccgctccatcagctggctaatc
tccatgttggtctctttctttgagagtctctttattactcagccgctgaaggttcttgga
tttgctgctttcttcgctcttgtcctgaagaaagtggaccaggaagagtacggagagcct
cagttagaggacaatctgagaaacccagatgatcccgatgcggtgcgtgcagcaagaaga
gacagcacatgcagtttctatcagccgcctcctcctactgacatcgagaagatcagaaac
aacatgattaaagaacagaaagtcttcgccctcgtaagagagattcttgcctacatggga
ttcatgtggatgttgctcctggtggcgtacggtcagagggaccccaacgcttactttctg
acccagcacattcaacagagcttcagcaaagggatctcagagagtatgagcattcgggat
gtgttcgactgggccaacacaactctgctgagcaacttgtttggagagtacccaggattt
atcacagatggaaactccaagctggtgggtaacgctcgtcttcgccaggtgagggtgctt
ccaaactcctgccatgtggctccctccatgcagaagtctgtgccggactgtcacgctctg
tactcctgggagatggaggacatgggctcctacggtccaggatggagccgctctgagggg
aataacacctcgctgaaccttcagagcccgtggacctaccagtcccagagaaaactgagg
gcctaccccatctggggcaatgtgatgctctacagaggaggagggtttgtggtggatctg
gggccagatttacaaaattccagcagatcccttcagtacctttatgacaacacctggttt
gatgtgtacactcaagcggtctttgttgagttcaccgtgtacaatgccaacgtcaacctc
ttctgcattgtcactctcatgctggagaccacagctttgggagctttccagtttcgcagt
gagcttcagagcgtgcgcctttaccagtcgaccggcggccttcacatctttgtcatggcc
tctgaagccatttacttcctcttcatcttctattacatgtttatccagggaaagctgatg
aagcagcagagatggacttatctcaagagtaagttgaacctgctggagctggccatcatc
atcctcagctggagcgcgctgtccgtcttcatcaagaggactttactgggaaaccgggac
atggactactaccagaacaacaaagaccaatatgccagtttccatgagacagccaaggcg
gatgcggtgctggggtatctgattgccttcctggtactgctggctacagtcaaactgtgg
cacctgctgagactgaacccaaagctgcacatgatcacagccaccctgcagcgagcctgg
actgatatctcaggctttctggtggtcatgacgatcatgttcatggcctactctattgct
tctaacctgatgtatggctggaagctttactcctatcgaactctgatggattctgcgcag
accatggtcagcctgcagcttggcatttttaactatgaagaggttctggattataatcca
gtgcttggagctttcctcatcggctcctgcattgtgttcatgacctttgtggtgctgaac
ctgttcatctctgtaattctggtggcattcactcaagagcagatccatcacaagccatcc
gaagaggaggagattgtggacctgatgttgatgaaactcttcagtttgtttggactgaaa
tctaagaaaccaggtggcgacggcctctctgagaggccagtagtttcatctgctccacaa
aatggactctccacgatttcttctgggaatatgtgtgatggttga
DBGET
integrated database retrieval system
