Pseudochaenichthys georgianus (South Georgia icefish): 117442666
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Entry
117442666 CDS
T09629
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117442666 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117442666 (myo5aa)
04131 Membrane trafficking [BR:
pgeo04131
]
117442666 (myo5aa)
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117442666 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117442666 (myo5aa)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117442666 (myo5aa)
mRNA cycle factors
P-body specific factors
117442666 (myo5aa)
Membrane trafficking [BR:
pgeo04131
]
Others
Actin-binding proteins
Myosins
117442666 (myo5aa)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117442666 (myo5aa)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117442666 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
Myosin_N
AAA_16
DNA_Packaging
HTH_17
AAA_22
Ac76
NPHP3_N
DUF5382
Motif
Other DBs
NCBI-GeneID:
117442666
NCBI-ProteinID:
XP_071058818
LinkDB
All DBs
Position
3:complement(45524587..45595197)
Genome browser
AA seq
1916 aa
AA seq
DB search
MKTHTESHAVRTPAAGMLAQIGALTAMAASELYTKRARVWVPDAEEVWKSAELTEDYRNG
DTSLQLMLEDGTNIEHKLDPKTKNLPYLRNPDILVGENDLTALSYLHEPAVLHNLKVRFM
DSKLIYTYCGIILVAINPYETLQIYGSDIINAYSGQNTGDMDPHIFAVAEEAYKQMARDE
RNQSIIVSGESGAGKTVSAKYAMRYFATVSGTTSEANVEQKVLASNPIMEDSHWKAKTTR
NDNSSRFGKYIEIGFDTRFRIIGANMRTYLLEKSRVVFQADEERNYHVFYQLCASSHLPE
YEKLKLSNAMEFQYTKQGRSPVIEGVDDTKELCSTRNAFTLLGINESYQMGLFQVLAAIL
HLGNVEIKDRDSDSSIVPPNNRHLSAFCELVGVTYEDMSQWLCHRKLKTATETYVKTVPR
LMATNARDALAKHIYAKLFNWIVEHVNKALITNIKQHSFIGVLDIYGFETFEINSFEQFC
INYANEKLQQQFNMHVFKLEQEEYMREQIPWTLIDFYDNQPCINLIEAKMGILDLLDEEC
KMPKGTDDSWAQKLYNTHLKTCSLFEKPRMSNRAFIIEHFADKVEYQCDAFLEKNKDTVN
QDQVNVLKASKFPLLVELFQDGEKAISPTGQGPGTGGRTRLSVKPVKGRESSSKENKKTV
GCQFRNSLAMLMETLNATTPHYVRCIKPNDFKLAFTFDPKRAVQQLRACGVLETIRISAA
GFPSRWTYQEFFSRYRVLMKQKDVLSDKRLTCRNVLEKLVEDQDKYQFGKTKIFFRAGQV
AYLEKLRADKLRVACIRIQKTIRCWLERKRYLRKRSAAITVQRFTRGYQARRLVKFMRRT
QAATTIQKYHRMVVERTRYRQKQAAALVVQTLLRAYMARQMYQSLLREQKVVIIQKRVRG
WLARCWYKRCLESIVYLQCCFRRMKARRQLKKLKIEARSVEHFKKLNKGMENKIMQLQRK
IDEQKENHKVVKDRLVSMETSYTAESEKLRAEVSRLRGVEEDAKSKGIRLSSLQEELEKL
KKELTTTRKEKKTIEDWAKTYRGEMEKMVSELKKQNGTLTKDNNDLNRMIQEQSQQMTDK
MAHAIVQETQQLETDLNEERSRYQNLLREHLLMEEKYDDLKEAMASSNASKPGHRRKDST
HSSNESEYTYNSEYAELEEGSRAAEDVTRGIDTSLTLKLQKRLTELEQEKQSLRNELENK
EDQFQRARARDDVEFKKARGAELEYESLKRQELDSENKKLKHDLVEIRQSLLGKAGPGAG
APGSPAYKVVLEQLNSSCEELEVRKEEVLILRSQLVSQKEAMHHKETMTEPSVYAEDVSK
LKDSDEIKQAYVGLKDTNRSPRFMRKPLEVSDLLSRLRSAAPDLHKLNEDGELWLVNQGL
KETIRLLEHQLQTQRRGYDNEVESLRGELQNVKEENNRQQQLLAQNLQLPPEARIEASLQ
HEITRLTNENLELLADDPEASREARVKILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRI
GEMGAGQTEGQTSPGQVVDEPIHPVNIPRREKDFQGMLEYNKEDELKLVKNLILELKPRG
VAVNLIPGLPAYILFMCLRHADYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLS
NTCRFLHCLKQYSGDEAFMKHNTTRQNEHCLSNFDLAEYRQVISDLAIQIYQQLIKCMEN
ILQPSIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHG
TDPELMKQVVKQQFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMVCG
AKETLEPLIQAAQLLQVKKKTDEDAEAICSMCLALTTAQIVKVLNLYTPVNEFEERVSVS
FIRTIQTRLRDRCESPQLLMDTKMIYPVTFPFSPSSLALETIQVPGSLNLAFLTRV
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacacaccgagtcccatgcagttcggacccccgccgccggaatgttagcccag
attggagcattgaccgccatggcagcgtcggagctgtacacaaagcgcgctcgggtgtgg
gtccccgatgcagaggaggtgtggaagtctgctgagctgaccgaagactacagaaatggc
gacacctccctgcagctcatgctggaggatggaactaacatcgagcacaaactcgacccc
aagacgaagaacctgccttacctgcgaaaccccgacatcctggtgggagagaacgacctc
acagcgctcagctacctccacgagccggccgtgctgcacaacctcaaggtccgattcatg
gactccaagctcatctacacctactgcggaatcattctggtggccatcaacccgtatgag
acgctgcaaatctatggatccgacatcatcaacgcctacagcggccagaacacgggcgat
atggaccctcacatcttcgctgtggcagaagaggcttacaaacagatggccagggacgag
aggaaccagtcgataattgtgagcggggagtccggggctggaaaaacggtatcggccaaa
tacgcaatgagatactttgctacggtcagcggcaccaccagcgaggccaacgtggagcag
aaggtgttggcctccaaccccatcatggaggacagccattggaaagcaaagaccacccga
aacgacaacagcagtcgctttgggaaatacattgagatcggcttcgacacccgcttccgt
atcatcggcgccaacatgagaacatatctgctggagaaatcacgagtggtgtttcaggcg
gacgaggaaaggaattaccatgtcttttatcagctctgtgcatcctcccatctgcctgaa
tatgagaaactaaagctcagcaatgcaatggagttccagtacaccaagcagggccgcagc
cccgttatcgaaggcgtggacgacaccaaggaactctgctccactcgcaatgccttcact
ttgctcggtattaatgagtcctatcagatggggctgttccaggttttggccgctattctt
catctaggaaacgtggaaataaaggaccgagactcagacagcagcatcgttccacccaac
aatcgccacctctcagcgttttgcgagttggtgggcgtgacctacgaggacatgtctcag
tggctgtgccacaggaagctgaagacggccacggagacgtatgtaaagaccgtcccccgc
ctgatggcaaccaacgcccgtgacgcgctcgccaaacacatctacgccaaactcttcaac
tggattgtggagcatgttaacaaagcgctgatcaccaacatcaaacagcactccttcatc
ggagtcctggacatctacgggtttgagacgtttgagatcaacagctttgagcagttctgt
atcaactacgctaatgagaaactccagcagcagttcaacatgcatgtgttcaagctggag
caggaggagtacatgagggagcagatcccctggactctgatcgacttctacgataatcag
ccctgcatcaacctcatagaagctaagatgggcatcctggacctgctggacgaggagtgc
aagatgcccaaaggcacagatgattcttgggctcagaaactttacaacacacacctgaag
acctgctccctctttgagaagccacgcatgtccaaccgtgccttcatcattgaacatttt
gctgacaaggtggagtaccagtgtgacgctttcctggagaagaacaaggacacggtgaac
caagatcaggtcaatgtgctgaaggccagtaagttccccctgctggtggagttgttccag
gacggggagaaagccatcagtcccacgggccagggcccaggcaccggaggacggacccgc
ctcagcgtcaaacctgtcaagggccgcgagagcagcagcaaggagaacaagaagaccgtc
ggctgccagtttcgtaactccctggcaatgctgatggaaacgttgaacgcaaccaccccg
cactacgtccgctgcatcaaacccaacgacttcaagttggccttcacgtttgatcctaag
cgtgcggtgcagcagctcagagcctgcggagtgctggaaaccatcaggatctctgctgca
gggttcccctccaggtggacgtaccaggagttcttcagccgttacagagtgctgatgaag
cagaaggacgtgttatctgacaagaggttgacctgcagaaatgttctggagaaactggtg
gaggaccaggataaatatcagtttggtaagaccaagatcttcttcagggccggccaggtg
gcctacctggagaagttgagggcagataagttgcgtgttgcctgcatccgcatccagaaa
accatccgctgctggctggagcgcaagaggtatctgcgcaaacgcagcgccgccatcacc
gtccagaggttcaccagaggataccaggcccgccgcctcgtgaagttcatgcgtcgcacg
caggcagccaccaccatccagaagtaccacaggatggttgtggagaggacacgctaccgg
cagaagcaggctgctgctctcgtcgtgcagaccctcctccgagcgtacatggcccggcag
atgtaccaatcgttgctgcgggagcaaaaggtggtgatcatccagaagcgagtgcgcggc
tggttggctcgctgctggtacaagcgctgcctggagtccatcgtctacctgcagtgctgt
ttccgcaggatgaaggcccggcgccagctgaagaagctgaagatcgaggctcgctcagtg
gagcacttcaagaagctcaacaagggcatggagaacaagatcatgcagctgcagaggaaa
atcgacgagcagaaagagaaccataaggtggtcaaagacaggctggtgagtatggagact
tcctacacagcggagagcgagaagctgcgtgcagaggtgagccggctgcgcggggtggag
gaagacgccaaaagcaaaggcatccggctgagctcgctgcaggaggagctggagaagctg
aagaaggagctgactaccactcggaaagagaagaagaccatagaggactgggccaaaacc
tacaggggggagatggagaagatggtctcggagctgaagaagcagaacggcaccctgacg
aaggacaacaacgacctgaaccggatgattcaggaacagagtcagcagatgacggacaaa
atggctcacgcgatcgtacaggagacccagcagctcgagacggatctgaatgaggagcgg
tctcgttaccagaatctactgagggagcacctgcttatggaggagaaatacgacgacctg
aaggaggcgatggcttcctcgaacgcctccaagcctggtcacaggagaaaagattccacg
cacagcagcaacgaatcagagtacacatacaactcggagtacgccgaattggaggaaggt
tcccgagctgcggaagatgtgactcggggaatcgacacgtcgctgaccctgaagctgcag
aagcgcctcaccgagctcgagcaagagaagcagtctctgcgcaacgagctcgaaaacaaa
gaggaccagttccagcgggctagagccagggatgacgttgagtttaaaaaggctcgcgga
gcagagctggagtacgagtcactgaagcgccaggagctggattcggagaacaagaagctg
aaacatgacctggtggagattaggcaaagcctgctgggtaaagctggtccaggcgccggg
gccccaggctccccagcctacaaggtggtgttggagcagctgaactcctcctgtgaggag
ctggaggtccgtaaggaggaggtgctgatcctgcgctcacagctggtcagccagaaggag
gccatgcaccacaaggaaaccatgaccgagccttcagtctatgcggaggatgtttccaag
ctgaaggactctgatgaaatcaagcaagcctacgtaggacttaaagacaccaacagatct
cctaggttcatgcgtaagccgttggaagtcagtgatctcctgagtaggctgagatctgcc
gctccagacctccacaagctgaatgaggacggagagctgtggctggttaatcagggctta
aaggaaactatcaggttactggagcaccagctgcagactcagcggcgaggctacgataac
gaggtggagtcgttgcgtggcgagctgcagaacgtgaaggaggagaacaaccgccagcag
cagctcttagcccagaacctgcagctgcctccagaggcccgcatcgaggccagcctgcag
cacgagatcacccgcctcaccaacgagaacctggagctcctggctgacgaccccgaagca
tccagagaggctcgagtcaagattttacgacggatggttgatctaatggagcagctggag
aaacaggaccgaaccatccgcaagctgaagaagcagctgaaggtttactccaagaggatc
ggagagatgggagcgggtcaaaccgagggacagacgtctccgggacaggtggtggacgag
ccgattcatcctgtcaacattccccgcagggagaaagatttccaagggatgctggagtac
aacaaggaggatgagctcaaactggtcaagaacctcatcctggagctgaagcctcgaggg
gtagctgtgaatctgatcccaggtctgccggcctacatcctgttcatgtgtctgagacat
gccgactacgtcaacgatgaccagaaggtccgcaccttgctcacctccaccatcaacagt
atcaagaagatcctgaagaaacgaggagacgactttgagaccgtctccttctggctatcc
aacacctgccgcttcttgcattgtctcaaacagtacagcggagacgaggccttcatgaag
cacaacacgacgaggcagaacgaacactgtctgtccaacttcgacctggcagagtaccga
caggtgatcagcgacctggccatccagatctaccagcagctcatcaagtgcatggagaac
atcctgcagcccagtatagtgtctggcatgctggagcacgagaccatccagggcgtgtcg
ggggtgaagcccacgggtctccgtaagaggacgtccagcatcgcggacgagggcacctac
accctggactccatcctgcggcagctcagcgccttccactccaccatgtgccagcacggc
accgaccccgagctcatgaagcaggtggtgaagcagcagttttacataatcggggctgtc
accctcaacaacctgctgctgcgcaaagacatgtgctcctggagcaaaggcatgcagatc
aggtacaacgtgagccagctggaggagtggctcagggacaaagggctgatggtgtgcggg
gcgaaggagacgctggagcctctaatccaggccgctcagctgctgcaggtaaagaagaag
accgacgaggacgccgaggccatctgctccatgtgcctggccctcaccacggctcagatt
gtgaaggtcctgaacctttatacaccagtcaacgagtttgaggagagggtatcagtgtca
ttcatacgaaccatacagactcgtttgcgcgaccgttgtgagagtccccagttgttgatg
gacaccaagatgatttaccccgtcaccttcccattcagcccgtcctcactcgccctggaa
accatccaggtccccggctctcttaatctggccttcctcacacgtgtctaa
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integrated database retrieval system
