Pseudochaenichthys georgianus (South Georgia icefish): 117442710
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Entry
117442710 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117442710
Pattern recognition receptors [BR:
pgeo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117442710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
117442710
NCBI-ProteinID:
XP_033934554
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MESSKQQREESPEPSCVSLRSDRSKGALIFFKDGHPSNDPVSKQQREESPEPSCVSLRSD
RSKGALIFFKDGRPSNDPVPQQQREESPGPSCVSLKSDRSKGALILFKDGRCSSDPVEDQ
QSSEVPRGQSAQQHQTQLDSTFMLLEDNIITFVKNELKKFQKALSSDYPECLESQREDEE
VLDGEDEEQRRSSSSSREAFLNISLHFLRSMKQEELAERLQSRSRSGACQRELKSNLKER
FQCVFEGIAKAGNPTLLNQIYTELYITEGGSAEVNAEHEVRQIETASRKPDRPETTIRQE
DLFKASPGRDAPIRAVLTKGVAGIGKTVLTQKFTLDWAEGKANQDILFIFPFTFRELNVV
RENKYSLVELIHHFFPETRDAGICRFDQFPVVFIFDGLDESRLPLDFLNTEILTDVTEST
SVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFR
DQEQAGTIISHIKTSRSLHIMCHIPVFCWISASVLEEVLKTREGGELPKTLTEMYIHFLV
VQSKVKNIKYDGGAETDPHWSPESRKMMEALGKLAFEQMQKGNLIFYESDLTECGIDIRA
ASVYSGVFTQVFREERGLYQDKVFCFVHLSVQEFLAALHVHLTFITSGVNLLSEEPTTSW
WPELFRPKPELTHLYQSAVDQALQSPNGHLDLFLRFLLGLSLQTNQKLLRGLLTETGSSS
KTNQETVQYMKKKMDEDLSPERSINLFHCLNELNDGSLVEQIQQSLSSGRLSTDNMSPAQ
WSALVFILLSSGEDLDVFDLKKYSASEEALLRLLPVVKASRKALLSDCKLSERSCAALSS
VLSSQSSSLRELDLSNNDLQDSGVKLLSAGLESPHCTLETLRLSGCLVSEEGSVSLASAL
RSNPAHLRELDLSYNHPGDSGDKLLSAGLEGPLWRLDTLRMEPAGVRWLRPGLRKYSCEL
SLDTNTAQRELKLSEDNRKVTCVREKQPYPDHPERFDFWPQLMCREALTGRCYWEVEWRG
GVHISVTYRGISRRGEXEDCVFGWNDQSWSLFCSDGGYSVWHNERRTQISSSSSSSSSSS
SSSSGRVAVYLDLPAGSLSFYRVSSDRLIHLHTCRTTFTEPLYAGFWFSSGSSASLCPL
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggagagctccaagcagcagagagaagagtctcctgaacccagctgtgtgtccctgagg
agtgatcggtctaagggtgctctgattttcttcaaagatggacatccttccaatgaccca
gtctccaagcagcagagagaagagtctcctgaacccagctgtgtgtccctgaggagtgat
cggtctaagggtgctctgattttcttcaaagatggacgtccttccaatgacccagttccc
cagcagcagagagaagagtctcctggacccagctgtgtgtccctgaagagtgatcggtct
aagggtgctctgattctcttcaaagatggacgctgttcttctgacccggtagaggaccag
cagagctcagaggttcccagaggtcagtctgcccagcagcatcagactcagctggactcc
acatttatgctgctggaggacaacatcatcactttcgtgaagaacgagctgaagaagttc
cagaaggctctgagttcagattacccagaatgcttagagagtcagagggaggatgaggag
gtgttggacggtgaggatgaagagcagaggaggagcagcagcagcagcagagaggcattt
ctgaacatctcactgcacttcctgaggagcatgaagcaggaggagctggctgagcgtctg
cagagcagaagtcgttctggagcgtgtcagcgtgaactgaagtctaacctgaaggagagg
ttccagtgtgtgtttgagggtattgctaaagcaggaaacccaacccttctgaaccagatc
tacacagagctctacatcacagagggggggtctgcagaggtcaatgctgaacatgaggtc
agacagattgaaacagcatccaggaaaccagacagaccagaaacaaccatcagacaagaa
gacctctttaaagcctcacctggaagagatgcaccaatcagagcagtgctgacaaagggc
gtggctggaattgggaaaacagtcttaacacagaagttcactctggactgggctgaaggc
aaagccaaccaggacatcctgttcatatttccattcaccttcagagagctgaacgtggtg
agagagaacaagtacagcttggtggaactcattcatcacttcttccctgaaaccagagac
gcaggaatctgcaggttcgatcagttcccggtcgtgttcatctttgacggtctggatgag
agtcgacttcctctggacttcctcaacactgagatcctgactgatgtcacagagtccacc
tcagtggatgtgctgctgacaaacctcatcagggggaagctgcttccctcggctcgcctc
tggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgtggacatggtg
acagaggtccgagggttcactgacccacagaaggaggagtacttcaggaagagattcaga
gaccaggagcaggccggcaccatcatctcccacatcaagacctcacgaagcctccacatc
atgtgccacatcccagtcttctgctggatctctgcttcagttctggaggaggtgttgaaa
accagagagggaggagagctgcccaagaccctgactgagatgtacatccacttcctggtg
gttcagtccaaagtgaagaacatcaagtatgatggaggagctgagacagatccacactgg
agtccagagagcaggaagatgatggaggctctggggaaactggcttttgagcagatgcag
aaaggcaacctgatcttctatgagtccgacctgacagagtgtggcatcgatatcagagca
gcctcagtgtactcaggagtgttcacacaggtcttcagagaggagagaggactgtaccag
gacaaggtgttctgcttcgtccatctgagcgttcaggagtttctggctgctcttcatgtc
catctgaccttcatcacctctggagtcaacctgctgtcagaagaaccaacaacctcctgg
tggcctgaactcttcagacccaaacctgaactaacacatctctaccagagtgctgtggac
caggccttacagagtccaaacggacacctggacttgttcctccgcttcctcctgggtctt
tcactgcagaccaatcagaaactcctacgaggcctgctgacagaaacaggaagtagctca
aagaccaatcaggaaaccgtccagtacatgaagaagaagatggatgaggatctgtctcca
gagagaagcatcaacctgttccactgtctgaatgaactgaatgatggttctctagtggag
cagatccaacagtccctgagttcaggacgtctctccaccgataatatgtctcctgctcag
tggtcagctctggtcttcatcttactgtcatcaggagaagatctggacgtgtttgacctg
aagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctcc
aggaaggctctgctgagtgactgtaagctgtcagagagaagctgtgcagctctgtcctca
gtcctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgacctgcag
gattcaggagtgaagctgctgtctgctggactggagagtccacactgcactctggagact
ctcaggctgtcaggctgtctggtctcagaggaaggctctgtttctctggcttcagctctg
agatccaaccccgcccatctgagagagctggacctgagctacaatcatccaggagactca
ggagataagctgctgtctgctggactggagggtcctctctggagactggacactctcagg
atggagcctgctggagtccgatggctgagacccggtctgaggaagtattcctgtgaactc
tcactcgacacaaacacagcacagagagaactcaaactgtctgaggacaacaggaaggtg
acatgtgtgagagagaagcagccatatcctgatcatccagagaggtttgacttctggcct
cagctgatgtgcagagaagctctgactggtcgctgctactgggaggtcgagtggagagga
ggggttcatatatcagtgacttacagaggaatcagcaggagaggagagnnagaggactgt
gtgtttggatggaatgatcagtcttggagtctgttctgctctgatggtggttactctgtc
tggcacaatgagagaagaacacagatctcctcctcctcctcctcctcctcctcctcctcc
tcctcctcctctggtagagtagcagtgtatctggatcttcctgctggctctctctccttc
tacagagtctcctctgacagactgatccacctccacacctgcagaaccacattcactgaa
cctctctacgctgggttctggttcagctctggttcctcagcgtctctgtgtcctctgtag
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