Pseudochaenichthys georgianus (South Georgia icefish): 117442790
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Entry
117442790 CDS
T09629
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117442790
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
117442790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
FeoC
Ependymin
Motif
Other DBs
NCBI-GeneID:
117442790
NCBI-ProteinID:
XP_033934641
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MSYTVDTSGSPFRRIMDTRTTGYGYSRSGSSPSSGFRSQSWSRASPGSTMTTSYKRSENM
PVSRAYSSADSGDYQTSMMNGDFKRSNEKEQLQGLNDRFVVYIDKVHYLEQQNKQIEDEI
QALRQKQVSRSQLGDHYDQELQDLRSMLEQIHHDKTQIQLDTDHVEEDIRRLRDRYDEEA
RIREETEAIIRVLRKDMSESELVKSELDKKVQSLQDEIAFIRNNHEEEVNELIAQIEESQ
VTVERKDLQKTDITEALREIRCELEGHSNQNLQQVENLFMCRYSKLTEAADQNKDAIKSA
RDEISDYRRQLQSKTVELEAIRRTRESLERQLNEIEDRHSSDLSSLQETIHQLDNELKST
KWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRQAVTPTKVFKSKSDA
PKLRVQHKFVEEIIEETRVKDEVTELDEALAEIAQELSATLGGGGDEGEEEEGEEGGEGE
EEEGDEQEGEGVEEEVVSAATKAKVSSSAPAKEEEEEEDDGKDEDGEGEGGEEEEKEEDG
EGEDEGEKGDDAEGGDEVEGDDGGEDEEEIEETVLCSKAPESKASPDQEKAGDKEGSGGE
EEASADEEDGEQDEDAGSDKASKSVDEKEDKEDAEKTTKEDSKKEEEVVAKTDASKSESA
KPVSKKEEAAKTEASKPDSPKSESPKLGSPKSETPKLGSPKSETPKLGSPKSESPKLGSP
KSESPKLGSPKSETPTLGSPKSETPKLGSPKSESPKLGSPKSESPKLGSPKSETPKLGSP
KSETPKFGSPKSESPKLGSPKSESPKLGSPKSETPKLGSPKSESPKLGSPKSESPKLGSP
KSESPKLGSPKSESPKLGSPKSESPKLGSPKSKSPKLGSPKSESPKLGSPKSEPPKLGSP
KSETPKLGSPKSESPKLGYPKSETPKLGSPKSETPKLGSPKSESPKLGSPKSESPKLGSP
KSESPKLGSPKSESPKLGSPKSESPKLGSPMSESPKPEIPKPTSLKPESPKPSSPKAESP
KSESPKPESPQAKSPKTPLPETPKAAEEKSEKKSDLTENVEKKDVAMNGDEDKSSSEERK
DEEKETDVVSNGVDESTVKEDGSQKVVIPKTVETITTGEDGSKRVTKSVTVTETVKDEVE
EVKEEVLVSTKKTEKHSSLSIKQVTEGE
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagttacacggtggacacttcagggagccccttcaggagaattatggatactaggacg
accggctacggctacagccgatccggcagctccccctccagcgggttccgctcccagtcc
tggtcccgggcaagccccggctccaccatgaccacgtcctacaagaggagcgagaatatg
ccggtgtcccgagcctacagctccgcagatagcggtgactaccagacctccatgatgaac
ggagacttcaagcgatccaatgagaaggagcaacttcaagggctcaacgaccgtttcgtt
gtttacatcgacaaggtgcactacctggagcagcagaacaagcagatcgaggacgagatc
caggcgctgcgccagaagcaggtgtcccgctcccagctgggcgatcactacgaccaggag
ctgcaggatctgcggtccatgctggagcagattcaccacgacaagacgcagatccagctc
gacaccgaccacgtcgaggaggacatccggcggctgagggaccgctatgacgaagaggct
cgcatccgggaggagaccgaagccattatccgcgtcctgaggaaggacatgagcgagtcg
gagttggtgaagtcggagttggataaaaaagttcaatctctgcaggatgagatcgccttc
atccgcaacaaccatgaggaagaggtgaacgagctgatcgcccagatcgaggagtctcag
gtgaccgtggagaggaaggatctgcagaagacggacatcaccgaggctctgcgggagatc
cgctgcgagctggagggtcactccaaccagaacctgcagcaggtggagaacttgttcatg
tgccgctactccaagctcaccgaggctgcagatcagaacaaggatgccataaagtccgcc
cgtgatgagatatcagactaccgccgccagctccagtccaagacggtggagttagaagcc
atccgcaggacaagagaatctctggagaggcagctgaatgaaattgaggaccgccacagc
agcgatctgtccagccttcaggagacaattcaccagctggataatgagctcaagagcacc
aaatgggagatggcacgtcacctgcgcgagtaccaggacctgctcaatgtcaagatggca
ttggacattgagattgctgcatacaggaaactcctagagggtgaggagactcacttcagc
actttcccctatcgccaggcggtcacccccactaaagtctttaagtctaaatccgacgct
cccaagcttagggtgcaacacaagtttgtggaggagatcatcgaggagacgagggtgaaa
gatgaggtgactgagcttgacgaagccctggcagagatagcacaagagctgtccgctaca
ctcggaggtggaggagacgagggagaagaagaggagggggaagagggaggtgagggagag
gaagaagagggtgatgagcaagagggggaaggcgttgaggaggaagttgtatccgccgcc
accaaagccaaagttagctctagcgcacctgctaaggaggaagaagaagaagaggatgat
ggaaaagatgaggatggggaaggagagggaggtgaagaagaagagaaggaagaagatggt
gagggggaagatgaaggagaaaagggggatgatgcagagggaggtgatgaagtagaagga
gacgatggaggagaggatgaggaggaaattgaggagacagttctctgctccaaagcgccc
gagtctaaagcctctcctgaccaagagaaggccggagacaaagaaggcagtggaggagaa
gaggaagctagtgccgatgaggaagatggagaacaggacgaagatgccggcagtgacaaa
gcctccaagagcgtagacgagaaagaggataaagaggatgctgagaaaaccacaaaggaa
gatagcaaaaaagaggaagaagttgtagccaagacagatgcttcaaaatcagaatctgca
aagcccgtgtccaagaaagaagaggcagccaaaacggaggcatcaaaacctgattcccca
aagtctgaatctcctaaacttggatccccaaagtctgagacccctaaacttggatcccca
aagtctgagacccctaaacttggatccccaaagtctgaatctcctaaacttggatcccca
aagtctgaatctcctaaacttggatccccaaagtctgagacccctacacttggatcccca
aagtctgagacccctaaacttggatccccaaagtctgagtcccctaaacttggatcccca
aagtctgaatctcctaaacttggttccccaaagtctgagacccctaaacttggatcccca
aagtctgagacccctaaatttggatccccaaagtctgagtcccctaaacttggatcccca
aagtctgaatctcctaaacttggatccccaaagtctgagacccctaaactcggatcccca
aagtctgaatctcctaaacttggatccccaaagtctgagtcccctaaacttggatcccca
aagtctgaatctcctaaactcggatccccaaagtctgagtcccctaaacttggatcccca
aagtctgagtcccctaaacttggatccccaaagtctaaatctcctaaacttggatcccca
aagtctgagagccctaaacttggatccccaaagtctgagccccctaaacttggatcccca
aagtctgagacccctaaacttggatccccaaagtctgaatctcctaaacttggataccca
aagtctgagacccctaaacttggatccccaaagtctgagacccctaaacttggatcccca
aagtctgaatctcctaaacttggatccccaaagtctgagtcccctaaacttggatcccca
aaatctgagtcccctaaacttggatccccaaagtctgagtcccctaaacttggatcccca
aagtctgagtcccctaaacttggatccccaatgtctgaatctcctaaacctgaaattccc
aagcctacatctctgaagcccgaatccccaaaaccaagctccccaaaagcagagtctccc
aagtcggaatctccaaaacctgaatctcctcaagctaaatccccaaagacccccctgccc
gagacccctaaagccgctgaagagaaatcagagaaaaagagcgacctaacagagaatgtt
gaaaagaaggatgttgccatgaatggcgatgaagacaagagcagctcagaggagaggaag
gacgaggagaaagaaaccgacgtggtctctaacggcgttgacgagagtacggtcaaagag
gacggtagccaaaaagtagtgatccccaaaaccgtggagacgatcaccactggagaggat
ggatccaagcgcgtcaccaaatctgtcactgtgaccgagacagtgaaggacgaggtggag
gaggtgaaagaggaggtgctggtgtccaccaagaagacagagaagcactcctccctgtcc
atcaagcaggtgacagagggcgaataa
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