Pseudochaenichthys georgianus (South Georgia icefish): 117442857
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Entry
117442857 CDS
T09629
Symbol
plxnc1
Name
(RefSeq) plexin-C1 isoform X1
KO
K06572
plexin C
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pgeo04090
]
117442857 (plxnc1)
CD molecules [BR:
pgeo04090
]
Proteins
117442857 (plxnc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
PSI
Chordopox_A13L
Sema
DUF5392
Baseplate_wedge
Motif
Other DBs
NCBI-GeneID:
117442857
NCBI-ProteinID:
XP_033934707
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MILLPILLSSLWGEPSRCLEEDGGFTTEKNIRHFAVATNTVYIAAEENLYQLNHDLTLVQ
NLTLRGILTGGHLNNDARFYRGSVTNELNATFSVNILLPFVMNGTLVSCGVIECGYCEVL
DLKNISNVLYREHIQVGSPLRNSASVGFLVNEEGKHAYILAALQQDETKSTGSSCPTGSE
AVHLHNTNNIQRGYIFSTVGEHNTHVIKREGSVEFVDGFQINSIIYLFSNLPSSNTVRLI
WLEGKATKKQTLESLRGANLSLSADGGRGGRLLSSSVIPGGAPVLWSGVFSVDGGKTNTE
LLLFDISPDLNMTADADPDFCSVCPVDKKKTAETLKPKAVLFRQKSMTSVLAVRHKAWMV
FFIGTGDGQLMKLSVDQNFQSSCPGVLYRDDYDRRVFPKMHLDPVDLKHVYMSFENQMKR
VAVSKCGTYTDVLACWSAQDPHCVWCGSTISCTFEDDCPNSDWLSIPDDSQQKMVSHKVM
KDSTGQVTLNIHTHLTVGQKALDTYSCNFSPSSSDFSELCSRESPFPKFPQCTCILSNSS
LPAEGRHVTVKIRLGTTTLMEKLKLSNCPDIRGRPAYVLCGECVRAGCGWSRHGCTWANQ
GVGNDSVCQQMESMMNLSRPEISSITPSNVSFHGRNHAVLSGSNLRDVIRVRIQCTQQEY
PVWNNTGVRLTFHIPGANSKGVVKVCVVLPDGSCHGNTKITYQSSPSCTDITPSSTWISG
KRNITLMGSHLELVEGVMHSHCLEGVMHSHCLQEVIPRSSNYQNLTYESPAAGKGVSAVK
VFLKVGNKSLPCHKTMSYHPEPEFISFTSTVTGEDLRITIQKKADGLAMREAELSVYGVQ
EGNTYPCVMKDKETSNETDFLICEIERTPFTKFQQLMIKYGDRTVTLNARYSINLYLILL
VLLLIPCICVVVVIIYRNQQKKLTAKMNRCMEDLELDIRNDIRQGFVDLQTEKADLMENV
GAIPFLDYKHFASRIFFPEDDSLMRLCIKDIGQDVVKVQLDDCCQGLSRLLQDQLFLTSM
VHALEEQKSFTIKDKCALASLLTVALHHNLSYLTEVMEALLKVLTQQNSNAQPKLLLRRT
ESTVEKLLTNWMSICLYGFLRESVGQHLYLMASAITQQTAKGPVDCVTEKALYTLSEDWL
LWQAQDFSCLRLKVLFAVGGDGELSEPLEVGALSCDSVEQVKEKILNTFKAKFGFPYNTP
LRDIHIEYERDGLFFPLEEVDASSEVIGEVTMLNTLRHYKVPDRATVKVLSRRTHPPLSP
QGSLKDDENFSEKYFHLIDPDVDEDQRKNPERKKLKLKEVHLTKLLSTKVAVHSFVENLF
RCIWGAPHCRAPHAVKYFFDFLDAQADSMKITDPDVLHIWKTNSLPLRFWVNILKNPQFV
FDMQKTPQLDSCLTVIAQAFMDSFSLSETQLGKHAPTNKLLYAKDIPKFKQEVKAYYKQI
RDQPPITHSEFKEFLQEESKKHEHEFNESVALRELYKFVQRYFTEIKEKLILNGAPSEMV
EQLQRVKRSFDELKSCSWN
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgctgcctattctgttgtcttctctctggggagaaccgagtcggtgcctggag
gaggacggaggcttcaccactgaaaaaaacatccgccatttcgccgtggccaccaatacg
gtttacatcgctgcggaagagaatctgtaccagctcaaccacgacctgactttggttcaa
aatctgaccctgagaggtatcctgacaggtgggcatctgaataacgatgcacggttttac
cggggttctgtgacaaacgaattgaatgcaactttcagcgtgaacatattgttgccgttt
gttatgaatggcactctggtcagctgtggtgttatcgagtgcgggtactgcgaggtgttg
gacctgaagaacatttcaaatgttctgtacagggaacacatccaggtggggtctccattg
cgcaacagtgcgtctgtcggcttcctggtgaatgaggagggaaagcatgcttacattctg
gctgccttacagcaagacgaaacgaaatccacagggagcagctgtcccactggatcagaa
gccgtgcaccttcataacaccaataacatccagagaggatatattttttctactgttggc
gagcacaatacccatgttatcaaacgtgagggcagtgtggagtttgtagatgggtttcag
atcaattccataatttatctgttctccaacttgccctcaagcaacacggtccgtctcatt
tggctcgagggcaaagcgaccaagaagcagactctggagtctctgcggggcgcgaacctt
agcctctccgcggatggagggagaggcggaagactcctctcttcctctgtgatcccgggg
ggggcgccggtgctctggagcggcgtgttcagtgtggacggaggaaagaccaacaccgag
ctgctgctgtttgacatcagcccggatctcaacatgacggccgatgcagatccggacttc
tgcagtgtgtgccccgtggataaaaagaagacggcagagacattgaagcctaaggcggtg
ctgttcaggcagaagtccatgacctctgtgctggcagtgagacacaaggcctggatggtt
ttcttcattgggacgggagatggtcagctcatgaagctttctgtggaccagaactttcag
agctcctgtcccggggtgctctacagggacgattacgaccgcagagtgtttcccaaaatg
catctggatccagtggatcttaaacatgtgtacatgtcattcgaaaaccagatgaagcgt
gtagctgtgtcaaagtgcggcacatatacagatgtgctggcctgctggtctgcacaggat
cctcactgtgtctggtgcgggtctaccataagttgcacatttgaagatgactgcccaaat
tcagactggttatccatccctgatgattctcaacagaaaatggtttcccacaaagttatg
aaggacagcactggccaggtcacactgaacatccacacacacctgactgtgggacagaag
gcgctggatacatattcctgtaatttctctccaagttcaagtgatttcagtgagctttgt
agcagggagagcccctttccaaagttcccacaatgcacctgcattctatcaaatagctca
cttcctgctgaaggccgccatgtcactgttaagattagacttgggacaacaacattaatg
gaaaaactgaagctctccaactgccctgacatcaggggacggccagcgtatgtcctgtgt
ggagagtgtgtcagggctggatgtggctggagcagacacggctgtacctgggcaaaccaa
ggagtggggaatgacagtgtttgccaacaaatggagtcaatgatgaacctttcaagacca
gagatctcctccatcacacccagcaatgtgtctttccacggcaggaaccacgccgtgttg
tcgggttctaacctcagggacgtgatcagagtgaggattcagtgcactcaacaagaatat
cctgtgtggaacaacactggtgtgagactcaccttccacattcccggggcaaatagtaaa
ggcgtggtcaaagtatgtgttgtcctcccagacggtagttgccatggcaacactaaaatc
acctaccagtcatccccatcatgcaccgatattacaccaagcagcacctggatcagtggg
aagaggaacatcactctcatgggttcccacctggagcttgtggaaggggtcatgcacagc
cactgcttggaaggggtcatgcacagccactgcttgcaggaagtcatacccagaagcagc
aactatcagaatctcacatatgagtcccctgcagctggaaagggggtttctgctgtcaaa
gtgtttctgaaagtaggcaataagagcttgccctgccacaaaacaatgagctaccatcca
gagcccgagttcatcagcttcacatccacagtgacaggagaagatttgcgcatcaccata
cagaaaaaggcagacggactggcgatgagggaagcagagttgtctgtgtatggtgttcag
gaaggaaacacttacccctgtgtaatgaaggacaaagagaccagtaatgagactgacttc
ctcatctgtgagattgaaaggacaccctttactaaatttcagcagttaatgataaaatat
ggggacaggacagtaaccctgaacgccagatattcaatcaatctgtacctgatactgctt
gtccttctgctgataccctgcatttgtgttgtggtggtgatcatctaccgaaatcaacag
aagaagcttactgctaagatgaacaggtgtatggaagacctggagctggacatcaggaat
gacattagacaaggttttgtcgatctgcagacagagaaggctgacctgatggaaaatgtc
ggcgcgattcctttcttggactacaagcactttgcctccagaatcttctttcctgaggat
gactctctgatgaggctgtgtatcaaagacattgggcaggatgttgtaaaggtccaactt
gatgattgttgccaaggcttgtccaggctgctccaggatcagctcttcctcacatccatg
gtgcacgctctggaggagcagaagagcttcaccatcaaagacaaatgtgctttggcgtca
ttgctaaccgtagcgctccaccataacttgtcgtacctgacggaggtgatggaggctctg
ctgaaggtgctgacgcagcagaacagcaacgctcagcccaaactcctgctgcggcgcacc
gagtccaccgtggagaagttgctgaccaactggatgtccatctgcctttatggcttcctc
cgggagagcgttggccagcacttgtacctgatggcgagcgccatcacacagcagaccgct
aaaggccccgtggactgtgtgaccgagaaggctctgtacacactgagcgaggactggctg
ctgtggcaggctcaggacttcagctgcctgaggctgaaggtgctgttcgcagtggggggg
gacggagagctcagcgagcctctggaggttggcgctctcagctgtgactcggtggagcag
gtcaaagagaagatcctcaacaccttcaaagccaagtttgggttcccctacaacaccccc
ctcagggacatccatattgagtatgaacgggatgggttattctttcctctggaggaggtg
gatgcaagctctgaggtcatcggggaggtgaccatgctgaacacactcaggcactacaag
gttcctgatagagcgacagttaaagttctttccaggagaactcatcctcctctgagcccg
cagggaagtctaaaggatgacgagaacttctctgagaagtactttcacctgattgatcct
gatgtagacgaggaccagaggaagaacccagagaggaagaagttaaaactaaaggaagtg
cacctcaccaagctgctctccaccaaggtggccgtgcactcctttgtggagaacctgttc
aggtgtatctggggcgcgccgcactgccgggcaccgcatgctgtcaaatacttctttgac
ttcctggatgctcaagcagactccatgaagatcaccgacccagatgtcctgcatatctgg
aagaccaacagtttgcctctgcgcttctgggtcaacatcctgaagaacccccagtttgtc
ttcgacatgcagaagactccacagctggacagctgcctgaccgtcatcgcccaggccttc
atggactccttctccctcagtgagacccagctaggaaagcacgcaccaaccaacaagctc
ctctatgccaaagacattcccaagttcaaacaggaagtaaaggcttactacaagcagatc
agagaccagccaccaatcacacactcagaattcaaggagttcctgcaggaagagtccaag
aaacacgaacacgagttcaacgaatctgtagccctcagagaactctacaagttcgtacag
cgctacttcacagagatcaaagagaagctgatcctgaacggagccccttcggagatggtg
gagcagctgcagcgtgttaaaaggtcttttgatgaactgaagagctgctcctggaactga
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integrated database retrieval system
