Pseudochaenichthys georgianus (South Georgia icefish): 117442902
Help
Entry
117442902 CDS
T09629
Symbol
shank3b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SH3_2
Ank_4
SAM_2
Ank_3
Ank_5
PDZ_6
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
117442902
NCBI-ProteinID:
XP_033934739
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MKMKMTFLPLFLPLFLPLMLLSGGVQTLSLDEGKYDAALSKCLRLDPELPVWSSKQRVLV
TLSQSLSDVLNYGLFQPAFNGRAGKFLDEERLLKEYPLPPITPIPYLEFRYKRRVYTQSY
VDDKQLAKLHTKANLKRFMEHVHQKNVEKVSKWLEKGLDPNFHDSDTGECPLTLAVQLED
SGDLIKVLRCGGAHLDFRTRDGITALHRAVLCRNSSSLTTLLDLGASPDYKDSRGLTPLY
HSAMVGGAPYCCELLLQDHAIIGMTDENGWQEIHQACRYGNVQHLEHLLFYGADMSSQNA
SGNTALHLCALYNQDSCARVLLFRGANKDIKNYNNQTAFQVAIIAGNFDLAEIIKIHKTS
DVVPFRETPSYTKRRRPGVSRSSAGNGLSSPRSLIRSASENVLESPASSPGPSLQSLETH
HDTHTHSLRRHSRRLSPSAGGHVGESSPPSSPPQMRKRRLYSAVPGRTFIATRSHVPQGP
GEIQLHRGERVKVLSIGEGGFWEGSVKGRTGWFPADCVEEVQMRQYDSRLETREDRTKRL
FRHYTVGSYDNYTSYSDYVIEEKTAVLQKREIEGFGFVLRGAKAETPIEEFAPTPAFPAL
QYLESVDQGGVAWRAGLRTGDFLIEVNSADVVKVGHRQVVSLIRQGGSRLLMKVVSVSRK
SESSNIVRKKAPPPPKRAPSTSLTLRSKSMTADLEDIARRRRFDKLDEMLAGGQQEVVLR
ARPADDFRAATVKQRPTSRRITQAEINSLFERQGLVPPSAPEKSTMALPRGMSRTKSFGT
PDDDRISALINESRFPRSSSLTDGFIPPPPQMAPPPPPSASSSTSSLFLLDSGPPPSFLP
PSPPARGEGLTRSSFKPGAEPRLVELCDSPTRSHAHAERQRKARSMIILQDTPPPPPLQP
DAHSGSTHALHTATHTATHTLHTATHTSTLSLHSTSPALGHSPLSRRRGRAIENPYANVG
QQAPPSKPQRRKSPLLKQLPVEEQGIKDQDLLKPDGPSSPSRAEMYQQQVLSERARVQGR
RSSLFLSVEGSGSENQVTLLTLSHSMDDLGELPPPAPVLSPSPTPHTFLHPLTGKPLDPS
SPLALALAARERALTARTPSPEPRHKHGSASPIPTPAASPDGRHKRTPIPTPQGSPEPRS
KRTPPQTSPEQRTKRTTPQTSPELRHKRITPPLFTDGSVERPETEGGVTSPAAPSPERWR
PTPLPPLANESHAALIDRRRSLTMGSSEEEGGAYTVTLPPALLSSSDEETREELRRIGMV
TPPAAFASPPPLPPPSSLTLLTRRGGEGGDPDSLGRRGDEDESDERLHDSSSPSSLPPSI
TLASPPDPSSPSSPTATHPSPSSPTTSPSVLKPRLRSPLGRGRSTLRDPLLKQSSDSELL
PSAAFSSSPSSPLCSSPTGGGGRQPRYLFQRRSKLWGGGDDDRRGFSPDESGRPAAFGGQ
VAGSAVDLSNRSSSALELSGRAGSGLDLVNRLQLLNKDSHSLGEEPSPLDPGRRSPVGGA
RCVDNGESKSLFSSLGELHTISQRGFGSGYTVRPGSRYPMMRRSPSPSPSPSDRSIGITS
SSAPGSERPDLSSGRGLTILKSSSLSLPSEPKEVRFVMRSASARTRSRSPSPSPHASPCP
SPVLSGPLLALRPWRQRPLNLWNKYDVGDWLESVGLAEHRQRFQEHEIEGSHLPALTKED
YVELGVTRLGHRINIERALRTLLDGST
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagatgacgttcctccccctcttcctccccctcttcctccccctgatgctc
ctctctgggggcgtccagactctctctctggacgaggggaagtatgacgctgcgctgtcg
aagtgtttgcggttggacccagagttaccagtttggagcagtaagcagcgggttctggtg
acgttgtcccagtctctgtcggatgttctgaactatggtctcttccagccggcgttcaac
ggccgagccggaaagtttctggacgaggagcgacttctgaaggaatacccgctccccccc
atcacccccattccctacctggagtttcgttataagaggagagtttacactcagagctac
gtggacgacaagcagctggcaaagctgcacaccaaggcaaacctgaagcgctttatggaa
catgttcaccagaagaatgtggagaaggtttccaaatggctggaaaagggactggacccc
aacttccacgactcggacaccggggagtgtcccctgacgctggccgtgcagctggaggac
agtggagatctgatcaaggtgctgcgctgtggaggagctcacctggacttcaggaccaga
gacgggatcacagcgctgcaccgagccgtgctctgtaggaacagcagctccctcacaaca
ctactggacctgggagcgtctccggactataaggacagtcggggtctgactcctctgtac
cactcagcgatggtggggggggcgccgtactgctgcgagctgctgctgcaggaccacgcc
atcatcgggatgactgatgagaacgggtggcaggaaatacaccaggcatgtcgctatggt
aacgtgcagcacttggagcacctgctgttctacggcgctgacatgagttcccagaatgca
tcaggaaacaccgcactgcacctctgtgctctctacaaccaggacagctgtgccagagtg
ctgctgttcagaggagcaaataaagacatcaaaaactacaacaaccagactgcctttcag
gtggcgataattgccgggaacttcgatctagctgaaattataaaaatccataaaacctcc
gacgttgttcccttcagagaaactccctcctacacaaagcgccgtcggccgggtgtcagc
cgctcgtcagccggaaacggcctctcgtctcctcgctctctgattcgctcggccagcgaa
aacgttctggaaagtcccgcctcctcgccaggcccctccctgcagagcctggaaacacac
cacgacacacacacacactcgctgcgacgacactcacgccgactcagtccgagcgccggg
ggccatgtgggggagagcagccccccctcctcccccccgcaaatgaggaagaggaggctc
tacagtgccgtccccggacgcaccttcatcgccacgaggagtcacgtcccccaggggccc
ggagagatccagctgcaccgcggggagagggtcaaagtcctgtctatcggagagggagga
ttctgggaagggagtgttaaaggacggaccggctggtttcctgctgactgtgtggaggaa
gtccagatgaggcaatatgactcgcgactggagacgagggaggatcgcaccaagaggctt
ttcagacattacactgtggggtcctatgataactacacctcctacagtgactacgtgatc
gaggagaagacggcggtgctgcagaaaagagagatcgagggattcggattcgtcctccga
ggagcgaaagcggagacgcccatcgaggagtttgctccgaccccggcgttcccggcgctc
cagtacctggagtcggtggatcaggggggcgtcgcctggagggcggggcttagaaccgga
gacttcctcatagaggttaacagcgctgacgtggtgaaggtgggtcaccgtcaggtcgtc
tctctgatccgacagggaggaagtcgtctgctgatgaaggtcgtctctgtttccaggaag
tcagaatcatccaacatcgtcaggaagaaagctccgccccctccaaaacgagccccaagc
acctcactgactctgagatccaagtccatgaccgccgacctggaggacatagccaggagg
agacgcttcgacaaactggatgagatgttggccgggggtcaacaggaagtggttcttagg
gcccgaccagcagatgactttagagcggcgacggtgaaacagagaccgaccagccggcgg
atcacacaggccgagattaactcgttgtttgagcgtcagggtcttgttcccccctcggct
ccagagaaaagcaccatggctttacctcgagggatgtccagaaccaagagctttggcaca
cctgacgacgaccggatctcggctctgatcaatgaaagtcgttttcctcggagctcctcg
ctaacggacggcttcatccctccccctcctcagatggctccgcctcctccaccctccgcc
tcctcctccacctcctcgctcttcctcctggactccggcccccccccatcgttcctcccc
ccttcacccccggccagaggggaggggctaacgcgctccagcttcaagccgggggcggag
cctaggctggtggagctctgtgattcgccgacgaggagccacgcccacgctgagcgccag
aggaaggctaggtcgatgatcatccttcaggacacgcctccgccaccgccacttcagccg
gacgcacactctggcagcacacacgctctgcacactgccacacacaccgccacacacaca
cttcacacggcaacacacacatctacgctgtcgctgcacagcacaagccccgccctcggt
cactcgccgctgtcacgccgccgcggaagagcaatagaaaacccgtacgctaacgttgga
cagcaggcgccgccgtccaagccgcagaggaggaagtcacctttgttgaaacaacttcct
gtagaggagcaaggaataaaagaccaggacttattgaaaccggacggacccagcagcccc
agtcgggcggagatgtaccagcagcaggttctctcagagcgagcccgggttcagggtcgg
aggtcgtctctcttcctgtcggtcgaaggatctgggtcagagaatcaggtgacactccta
actctgagccattcgatggacgatcttggcgagcttcctcccccagctccggtcctttca
ccatcaccgacgcctcacaccttcctccacccactgaccgggaaaccactagacccctcg
tctccactcgccctggcccttgctgcacgagaacgagcgctcaccgcccgaaccccgagt
ccagagcctcgacataaacacggatctgcctcacctatccccacccctgctgccagtcca
gacggacgacacaagcgcacccctatccccaccccgcagggcagcccagagcctcgatcc
aagcgcaccccccctcagacgagcccagagcagcgaacaaagcgtaccacccctcaaacc
agtccggaactgaggcacaaacgcataacgccgcctttgttcaccgacggatcggtggag
cgtccggaaaccgagggaggagttacatcgcctgccgctccatcgcccgagcgttggaga
ccgacccctttgccaccgctggccaatgagagtcacgccgctctgattgacaggcgcagg
agcctaacaatgggcagctccgaggaggagggcggggcttatacggtaacactcccgccg
gcgttattgtcgtcaagcgatgaggaaaccagggaggagcttcgcagaattggcatggtt
actccccccgctgccttcgctagccctccccctcttcctcccccatcctccctcaccctg
ttgactcgacgaggcggggagggaggagatcctgactctctaggtagacgaggtgatgaa
gatgaaagtgacgaacgcctacatgacagctcttcccccagctccctccctccctccatc
accttggcctcccctcctgatccatcctccccctcctcccctacagctactcacccatcc
ccttcctcccccaccacctccccatctgttttgaaaccacgccttcgttcaccgttaggt
cgcggtcgctccacgctccgtgatcctcttctgaagcaatcatcggacagtgagctcctc
ccgtctgctgccttttcctcctccccttcctcccctctctgttcctcacccaccggtgga
ggtggacgtcagcctcgttatcttttccagagaaggtcgaagctttggggcggcggggat
gacgatcgtcggggattcagcccagatgaaagcggccgtccagcggcattcgggggtcaa
gttgccgggtcagctgtggatctgagcaaccggtcgtcttcggctctggagctgagcggc
cgagccgggtccggactggatctggtgaatcggctacagctgctcaataaagacagtcat
tctctgggggaggagccgagtcccctggatccgggccggaggtcgccagtaggaggtgcc
agatgtgtggacaatggagagagtaaatcgttgttctccagtctcggtgagctccacact
atttcccagcgaggattcggctcgggctatacagtccgaccgggaagtcgataccccatg
atgcgccgaagcccctccccctctccctccccctccgataggtcgataggaatcacctcc
tcctccgcccccgggtcagaaagacccgatttaagctccggtcgcggtctaaccatcctg
aagtcgtccagtctcagcctcccctccgaaccaaaggaagttcggttcgtgatgcggagc
gccagtgcgagaacacgctccagatctccctctccgtccccccacgcctccccatgcccc
tcccccgtcctcagcgggcctctcttagccctgaggccatggagacagcgtccactcaac
ctgtggaataaatatgacgtcggcgattggctggaaagcgtcggactcgctgaacatcgc
caacgcttccaggagcacgaaatcgagggttcccatctcccggcgttaacgaaggaggat
tacgtggagcttggcgtcaccagactgggtcaccggatcaacatcgagagggccctccga
acgctgctggacggatccacttga
DBGET
integrated database retrieval system
