Pseudochaenichthys georgianus (South Georgia icefish): 117443019
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Entry
117443019 CDS
T09629
Symbol
spg11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117443019 (spg11)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117443019 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APH
Motif
Other DBs
NCBI-GeneID:
117443019
NCBI-ProteinID:
XP_071058632
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MMMMMMEESGSTEVCVIPENPHCVRVSELRRAELAPGGSLLLGCLRDRGLLEVLDPADRD
SPPAEASGRYTDFCWEEEGGGGRLLAVGSQFDLKLLEAERPSTISIRSEVPAERLLKTLR
EQDPGVCELQSLQVLCFSAGRGCLLLNSDWLLQLQWMQTDEQPQTISCCRIHTHSPDRHT
NSPDSNTHSPDRHTHSPDKDTHSPDKDTHSPDSNTHSPDSNTHSADRHTHSADSNTHSPD
KDTHSPDSNTHSSKGHTHSPDGHTHSPEGHTHSPVHRCVCVVRETLFSLSSSGLISVCSL
SDGRLLASIDLPLYLSAAQPEEELLSSSSSSGVSSSSSFCLLQLSADLSTAVAVTETHSA
AAVPLDHYFSLFPDHLLCATPPSRPPLRPLMQVDQDSLWSSSCSLSSLGSTFSTDRSWEA
RLSSMYSRAQPPPSSSSSSSSSSSSPWSSSLPHLYSQSSSSHSRVPLGGATVSFSVPESS
APSLLTVTEFSAQLTFVSPGNTETTVALWEMESGNVTQHRAEGEAAPVQRCGERQHRLLL
KDSGVFQVLFSVSQEDLLSRLMLFGSAATVDAVCHLNSWGRCSIPIHSLQAGLKNRQLDT
VDFYLKSKENILNPENDQPPPQSLTQGFQELCSALDLLCSAVRESNIEAQSRQFSEQLLN
ITLSFINRQIRSVLTNTQHEDLSLQVEVLDRYVTELRSYMKRFPWPVGGDTCSTHSAEAA
PLQEEEDEREEEEDEWEKLQTEEVVRHSILTNQIPRAQAVLRGRGLKEQCLSALRRRGLQ
EVFTCLQHRDLHTANTLLTNMGFNVKQQLRSICLFTDDYDLRDFVVEQLSGQRLLPEEEV
QSVEFMKQMERLGSLPAARSAETPSHRGVQMVLRQGGVGGEVLQELLSQRREGEGAGLWT
TLRLDWVRNWDRSCRTAVLLSRRPPSEVTSCDPALLWRYLTSLHDQRRIIDWIQNEEVNP
DLVNNNTACSCFLREKILDLLA
NT seq
2948 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatggaggagagcggctccacggaggtgtgtgtgatcccggagaac
cctcactgtgtccgggtgtcggagctccggagggcggaactggctcccggagggtcgctg
ctcctcggctgtctgagggaccggggcctcctggaggtcctggacccggccgacagagat
tctcccccggcagaggcgagcgggagatacacggatttctgctgggaggaggaggggggg
ggcgggcggctgctggctgtcggctctcagtttgatctgaagcttctggaagcagaacga
ccctcaacgatctccatcagatctgaagttcctgctgagcgcctgctgaagaccctcaga
gagcaagaccccggtgtgtgtgagctgcagtctctccaggtgttgtgtttctcggctggc
cgcggctgcctgctgctcaactctgattggctgctgcagttgcagtggatgcagacggac
gagcagccgcagaccatctcctgctgcagaatacacacacactctcctgacagacacaca
aactctcctgacagcaacacacactctcctgacagacacacacactctcctgacaaagac
acacactctcctgacaaagacacacactctcctgacagcaacacacactctcctgacagc
aacacacactctgctgacagacacacacactctgctgacagcaacacacactctcctgac
aaagacacacactctcctgacagcaacacacactcctctaaaggtcacacacactctcct
gacggccacacacactctcctgaaggacacacacactctcctgtgcaccgctgtgtgtgt
gtggtcagagagactctgttcagcctcagctcctccggactcatctctgtgtgtagcctc
agcgatggccgcctgctggcctccatcgacctccctctctacctgtcagctgctcaacca
gaagaggagctgctctcctcctcttcctcctctggcgtctcctcctcttcctccttctgc
ctcctgcagctgtcggctgatctgagcacagctgtagccgtcaccgagactcacagcgcc
gccgccgtgcccctggaccactacttcagtctgttcccggaccacctgctgtgtgccacc
cccccctcccgaccccccctgaggcccctgatgcaggtggaccaagactccctgtggagc
tccagctgcagcctctcttccctcggatccaccttcagcaccgaccgctcctgggaagct
cgtctgtcttccatgtacagcagggcccagcctcctccctcctcttcctcctcctcttcc
tcctcctcttcctccccctggtcctcctccctcccccacctgtactcccagtcctcctcc
tcccacagcagggtgcctctcggcggggcgaccgtctccttctccgtcccagaatcctcg
gctccgtcgctgctcaccgtcaccgagttctccgcccagctgaccttcgtctcccccggc
aacacggagaccacagttgcattgtgggaaatggagtccgggaacgtgacgcaacaccga
gcggagggcgaggcggctccggtgcagcgatgtggagagaggcagcaccgcctgctgctg
aaggactctggtgtgtttcaggtcttgttctcggtgtctcaggaggacttgctcagcagg
ctgatgttgttcggcagcgcagccacggtggacgcagtttgtcacctgaacagctggggg
cgctgttccatccccatccactccctgcaggcgggcctgaagaaccgtcagctggacacg
gtggatttctacctgaagagcaaagagaacatcctgaaccccgagaacgatcaacccccc
ccacagagcctcacacagggtttccaggagctgtgctcggcgttggatctgctctgctcg
gcggtcagagagtcgaacatcgaggctcagagtcgccagttttccgagcagctgctgaac
atcacactgagcttcatcaacagacagatccgctcagtgctgaccaacacacagcacgag
gatctgagcctgcaggtggaggttctggatcgctacgtcacggagctcaggagctacatg
aagaggttcccctggcctgtagggggcgacacctgcagcacacactctgctgaggcggcc
cccctgcaggaggaagaggatgagagggaggaagaggaggacgagtgggagaaactgcag
acggaggaagtggtgcggcactccatcctgaccaatcagatacctcgggctcaggcggtg
ctgagggggcggggcctgaaggagcagtgtctgtctgctctgaggaggcggggcctacag
gaggtgttcacctgtctgcagcacagagacctgcacactgccaacacgctgctcactaac
atgggcttcaacgtaaagcagcaactccgcagtatctgcctcttcaccgacgactacgac
ttgcgggacttcgtggtggagcagctgtcagggcagaggctcctccccgaggaggaggtg
cagagcgtggagttcatgaagcagatggagcggctgggctccctgcctgctgcccgctct
gcagaaaccccttcacacaggggggtgcagatggtgctcaggcaggggggtgttgggggg
gaggtgctgcaggagctgctgtcacagaggcgggagggagagggggcggggctctggacg
accctcaggctggactgggtcaggaactgggaccggagctgcaggacggccgtgctgctg
tccagacggcctccctcagaggtgacttcctgtgacccggcgctgctgtggcgttacctg
acgtcgctccacgaccagcgccgcatcatcgactggatccagaacgaggaagtgaaccca
gacctggtgaacaataacaccgcctgtagctgcttcctgcgcgagaagatcctcgaccta
ctggccag
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