Pseudochaenichthys georgianus (South Georgia icefish): 117443104
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Entry
117443104 CDS
T09629
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1-like
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117443104
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117443104
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
MYO6_lever
IQ
EGF1_RECK
Motif
Other DBs
NCBI-GeneID:
117443104
NCBI-ProteinID:
XP_033934941
LinkDB
All DBs
Position
3:complement(45060563..45088822)
Genome browser
AA seq
1257 aa
AA seq
DB search
MQKGMRLNDGHITYLALLAKKDGTRRGCLSKKSSDNTKWHSKWFALLQNMLFYFENDSSS
RPSGLYLLEGCVCDRAPSPKPSLSAKECLEKQYYFTVTFNHDNQKSLELRSEDVKDCDEW
VAAITQASYRNLATEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEIAG
LLKDNEKIQSNPEVPPSEDDLEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEVLLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHITKNGVSSLIDCTLMEEPEGTDDETKVER
SGMDTENLDFKVMVEPKDVQPYTVILVASSRQEKSAWTSDICQCIDNIRCNGLMMNAFEE
NSKVTVPQMIKSDTSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTSADVVLEKLITIYKKPISAIPARSLELFFASSQSNKLLYGEPPTSPRAS
RKFSSPPPLAITKTSSPNRRRKLSLNIPIITGGKALDLAALNCSPNGYASMHSTMSPFSK
TTLDINKLYVSSTKASKIPDEGETKAEGKAEETVLNKQDLSEREECNEDPSQSEETEAEM
SPPKSPSTPKNVKSKNSEFSLFSFNNGMVVSSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFELNTELKT
RVISFLEEVIHDPELLTQERKAAANIIRTLTQEDPGDNQVTLEEITQMAQEDCKTEPFES
HSALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNERTPYIMKTTKHFNDISNKIATE
ILQWDDVNLRVAVIEKWVAVADICRCLHNYNAMLEITSSLNRSSVFRLKKTWLKVSKQTK
TVIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDSLVNFS
KMRMISHIIREIRQFQQTAYKIDYQPKVAKYLLDSSTTLDEESLYDASLRIEPKTSA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagggatgagactcaatgacggccacatcacctatctggctcttttggctaag
aaggatgggacgaggcgaggttgcctgagtaagaaaagctcagacaacacaaaatggcat
tctaagtggttcgctttgttgcagaacatgttgttttatttcgagaacgactccagctca
cgcccctccggactgtacctgttggagggatgtgtgtgtgacagggcaccgtcacccaaa
ccatctctctccgcgaaggaatgcttagagaagcagtactactttaccgtcacgttcaat
catgacaaccagaagtctttggagctgcgctcggaggacgtcaaggactgtgatgagtgg
gtggcagccatcacacaggccagttacaggaacctggctacagagcatgagaccctcatg
cagaagtatctccatctactccaaatagtggagacggagaaaacggttgccaagcaactt
cgacaacagatagaggatggggaaatcgagatagagcggctaaaatctgagattgctgga
ctgctcaaggataatgaaaagatccagtctaatccagaggtacctcccagtgaagatgac
ttggagatcaagaagatcaaaaaggtccagagtttcctgcgaggttggatttgccgcagg
aagtggaaaaccatcatccaggactacatccgttcgcctcacgctgagagcatgaggaaa
aggaaccaggtggtgtttagcatgctggaagcagaagccgaatacgtccagcaactccac
atcctggtcaacaacttcctgcggccgctccgcatggccgccagctccaagaagccgccc
atcacccacgacgatgtcagcagcatcttccttaacagtgagaccatcatgttcctccat
cagatcttctaccagggtctgaaggcacggatagccagctggcccactctggtgctggct
gaccttttcgacatcttgctgcccatgctgaacatctaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctggcccactgcaaacagaaccgagattttgacaagctgctg
aagcagtacgaggccaagcccgactgtgaggagaggacgctggagaccttcctcacttac
cccatgtttcagatccctcgttacatcctgacactgcacgagctactggctcacaccccc
catgagcacgtggagagaaacagtctggactacgctaaatctaaactggaggaactctcc
agaatcatgcatgacgaggtgagcgagacggagaacatcaggaagaacctggctattgag
cggatgattgtagagggctgtgaagtgctcctggacaccagtcagacatttgttagacaa
ggttccctgatccaggtgccgatgagcgagaaagggaagatcacgagaggccgcctgggc
tctctgtctctgaagaaagaaggagagagacaatgtttcctcttctccaaacatctcatc
atctgtacccgcggctccggggggaaacttcacatcactaagaatggagtttcctctctc
atagactgcacactgatggaggagccggaggggacggatgatgaaaccaaagtggagcgg
agtggtatggacacagagaacctggacttcaaagtgatggtggagcccaaagacgtccag
ccttacaccgtcatcctggtggcttcatcccgacaggagaagtcagcgtggacgagcgac
atctgccagtgcattgacaacatccgctgcaacggtctgatgatgaacgccttcgaggaa
aacagtaaagtcaccgtgcctcagatgattaagtcggacaccagcttgtactgcgacgat
gtggacattcgcttcagcaagatgatgaactcctgcaaggtgctgcagatccgctatgcc
agcgtggagcgattgttggagaggctcaccgacctgcgcttcctctccatcgacttcctg
aacaccttcctccactcgtaccgcgtcttcaccagcgctgacgtggtgctggagaagctc
atcaccatctacaagaagcccatcagcgccatccccgcacgttctttggagcttttcttt
gccagcagccagagcaacaaactcctgtacggcgagccacccacgtcgccgcgtgccagc
cgcaagttctcctcccctccccccctcgccatcaccaagacgtcctcgccaaaccgccga
cgcaagctttcgctcaacatccccatcatcacggggggcaaagccctggacctggctgct
ctcaactgttctcccaatggctatgcaagcatgcactccaccatgtcacctttcagcaag
accacccttgacatcaacaagctttacgtgtccagcaccaaggcaagcaaaatccccgat
gagggagagaccaaagctgaaggcaaggctgaggagaccgtcctcaacaagcaagatctg
tctgagagagaggaatgtaatgaggacccaagtcagagtgaggaaacagaggcggagatg
tctcctcccaaatcaccatcgacacccaagaatgtcaagtcaaaaaactctgagttttcc
ctgttttccttcaacaatggcatggtggtgtcatcttgccgggagctggacaataaccgc
agtgccctttctgccgcctcggccttcgccatcgccaccgctggtgccaacgagggcacg
ccaaccaaggagaagtaccgtcggatgtcgctcgccagcacaggttttcctacagaccag
aggaatggagacaaagagtttgttatcaggagagcggccactaacagagtgctgaacgtt
ctgcgtcactgggtctccaaacactcgcaggactttgagctgaacacagagctgaagacg
cgggtaatcagcttcctggaggaggtgattcacgacccagagctcctcacacaggaaaga
aaggcagctgccaacatcatcaggactctcactcaggaggatccaggagataaccaggtc
acactggaagagatcacacagatggcacaggaggactgtaaaactgagccttttgagagc
cactcggccctggagatagctgagcaactcacactgctggaccacctggtcttcaaggtc
atcccatacgaggagttctttggtcaaggctggatgaagaacgacaagaacgagagaact
ccctacattatgaaaactaccaagcatttcaatgatatcagcaacaagattgcgacagag
atcctgcagtgggacgatgtcaacctgagagtggcggtgatcgagaaatgggtcgcagtg
gcagacatctgtcgctgcctccacaactacaacgccatgctggagatcacatcctccctg
aaccgcagctccgtcttccgcctcaagaagacctggctcaaagtctccaagcagacgaag
accgtgatcgacaagttacagaagctggtgtcatcagagggacgattcaaaaacctgaga
gaagctctgaagaactgcgaccctccctgtgttccctacctgggaatgtacctgaccgac
ctggcctttatcgaggagggaacacccaactacaccgaggacagcctggttaacttctcc
aagatgagaatgatatctcacattatcagagaaatacggcaatttcagcaaacggcttac
aagattgattatcaaccaaaggttgcaaagtacctgctggacagcagtacgacactggat
gaggagagcctgtatgacgcatctctcagaatcgagcccaaaacttcagcatga
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