Pseudochaenichthys georgianus (South Georgia icefish): 117443157
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Entry
117443157 CDS
T09629
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117443157 (ift52)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
117443157 (ift52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
MuF_C
Motif
Other DBs
NCBI-GeneID:
117443157
NCBI-ProteinID:
XP_033934996
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MEKEQHNTVVFNVSKRELFTTNNGYKTMQKRLRAQWKIQSLKEELSLEKLKGVKLWITAG
PREKFTASELEVLKHYLDAGGNVLVMLGEGGERKYDTNINFLLEEFGIMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVAGSIEDEKVGNNAQALTFVYPYGATLSVIKPA
VALLSTGSVCFPLNRPVLAFHHGKEAGKLVVLGSCHMFSDQYIDKEENSKIMDVLLQLLM
ADNIQLNQIDAEDPEITDYTMLPDTGCLSDQLRVCLQEGEETPRDFTSLFDMSLFNLSTD
TLPQVISAYKQLNVKDEPLQLITPQFETPLPQLQPAVFPPALSDLPPPMLDLFDLDETFS
SEKVRLAQLTNKCTDDDLEFYVRKCGEILGVTPKLDKEQRDAKHILEHIFFQVVEFKKLN
QEHDADTDTPFPPS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaacaacacaacactgtcgtcttcaatgtctcgaagagagagctgtttact
acgaataatggatacaaaaccatgcagaaaagactaagagctcaatggaaaatccaaagt
ttgaaggaagagctgtctctggagaagctgaagggtgtcaaactgtggataactgcgggt
cctagggagaagttcacagcatcagagctggaggtgctgaagcactacctggacgcagga
ggaaacgtcctggtcatgctcggtgaaggaggagaaaggaaatatgatactaacatcaac
tttcttctggaggagtttgggataatggtcaacaatgatgctgttgtgaggaatgtgtat
tacaaatacttccaccctaaggaggcgcttgtgtccaatggtgtgctgaacagagagatc
agtcgagctgctggaaaagtggtcgcaggcagcatcgaagatgaaaaagttggaaacaat
gcacaggctctcacgtttgtgtatccgtacggagccacactgagcgtgataaagcccgcg
gtggctctgctctcaacgggctccgtctgcttccccctcaacagacccgtcctggccttc
catcacggaaaggaggctggcaaactggtagtgttgggttcctgccacatgttcagtgac
cagtacatagacaaagaggagaacagtaaaatcatggatgtcttgctccagttgctcatg
gccgataatatccagctgaatcagatcgatgcagaagacccagagatcacagattacacc
atgctgccggacacgggctgtttgtcagatcagctcagagtgtgtttacaggagggcgaa
gaaaccccccgggacttcacctcgctctttgatatgtctctgttcaatttgtcaactgac
accttaccccaagtcatcagtgcttacaagcagctcaatgtgaaagacgagcctcttcag
ctgatcacgccgcagtttgagacgccgctgcctcagctgcaacccgctgtctttccacct
gccttgagcgacttgcctcccccgatgcttgacctgttcgacttggatgaaacgttctcc
tcggagaaagtgcgcctagcccagctcaccaataaatgtacggacgatgacctggaattc
tacgtgcggaaatgcggggaaattctgggtgtgactccaaagctggacaaagagcagagg
gatgccaagcacatcctggaacacattttcttccaggtggtggagttcaagaaactcaat
caggagcacgatgccgacacagacacgcctttccctccgtcgtga
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