Pseudochaenichthys georgianus (South Georgia icefish): 117443203
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Entry
117443203 CDS
T09629
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117443203 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117443203 (vps54)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117443203 (vps54)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
117443203 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
DUF7071
Motif
Other DBs
NCBI-GeneID:
117443203
NCBI-ProteinID:
XP_033935046
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MASSHGSSPAPRPGRDGMYLKERGAPPPRCRSLRSLPDVCPKEPTGEGRGLCDGPSVVAD
LDRWTVLSSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETEVMPSFYLPNITKEHFAPY
LQEMAQRERIHERCKTICPNKDDVEAVSSNNSNHDKSKAELEQVPKIFMKPEFALEDPST
FNSVLPWSHFNSAGGKSSRDVASSKLLQEKLSHYLDVVEVSIARQISLRSDAFFHAMSSQ
HDLQDRLQDTQRAVAVLRGRIAAIDRVTVQGPLRALRTNLTRNNCVKLHNKLKLMAAVHQ
TQPTVQLLLSTAEFMGALELISTTKEVLQQELQGVHSFRHLGSQLCELEKLIDKMMVEDF
SMYARSDLNRCLRDEPHVLDKERLESLVFGLLRQRKLDFLDIYSEEMIMAVKAIVSLCVA
ENVLQIEDIDTEVVTKVADQTRLMTFPQWFELLKSVFESFLLFLQRIKATQTVIKNVVLE
VLASTQKLRLLEEAALVQEGPPGPELLQGGGAELAYLTHEGLFISDALNEAQQGLQDQSS
GLQDQSSVGGARLQQRDSASGYTETSVSREQSYMSGENMMPSDLELNRVTNTLQELLHTA
SDVSHDRCVKVLTARAKDGSLERLSSADFVLLSQTVEGFVRDTEDLSGRRIASLRGALQS
QANRFVHRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVNSIADGRITLPERKIPGAEDR
KPTEFLFVNGQKYAVVGTVLLLIRIFLEYCQCVNDIPSIATDMLTRLSDLLKHFNSRSCQ
LVLGAGALQVVGLKTITTKNLALASRCLQLVVQYIPVIRAHFETKLQPKQYSVLRHFDHI
TKDYNDHIAEVSAKLVAIMDSLSEKVLSKYEVKAPMPSAVFRTVCKQMAKMHEAISELLP
EEQTQMLFLRINASFKLHLKRQLSRLGVVNDGGPQNGLVVVDVAFYTENVQVLKSLDRLD
LNMVEIWEQKR
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagccacggctcctcccccgcgcctcgtccaggccgagatgggatgtatctc
aaggagcggggcgcccccccccctcgctgccggagcctccgctcgctgcccgacgtctgc
cccaaggagcccacaggtgaggggcggggcctgtgtgacggcccctcggtggtggcggat
ctcgacaggtggaccgtgttgagctcgaaggtgaacctcccggcggcgctgaacgacccg
cggctcgccaagagggagtcggacttcttcaccaagacgtgggggctggacttcgccgag
accgaggtgatgccctccttctacctgcccaacatcaccaaggaacactttgccccctac
ctgcaggagatggcccagagagaaagaatccacgaacgctgcaagacgatctgtcccaac
aaagacgatgtggaagcggtctccagtaacaactccaaccacgacaaatccaaagctgag
ctggaacaagtcccgaagatcttcatgaagcccgagttcgctctggaggatccttccacc
ttcaacagcgtgctgccctggtcgcacttcaacagcgccggggggaagagcagccgagac
gtggcgtcctccaagctcctgcaggagaagctgagccactacctggacgtggtggaggtg
agcatcgcccggcagatctctcttcgctccgatgcgtttttccacgccatgtcctctcag
cacgacctccaggaccgtctacaggacactcagcgggccgtggccgtgctgcggggccgc
atcgcagccatcgaccgggtcacggtccaggggcctctgagggccctgcgcaccaacctg
acccgaaacaactgcgtgaagctgcacaacaaactgaagctgatggcggcggtgcaccag
acgcagcccaccgtgcagctgctgctctccaccgctgagttcatgggggcgctggagctc
atctccaccaccaaggaggtcctccagcaggagctgcagggggtccacagcttcagacat
ctgggctctcagctgtgtgagctggagaagctgattgataagatgatggtggaggacttc
agcatgtacgcccgcagcgacctgaaccgctgcctgagggacgagccgcacgtcctggac
aaggagcgtctggagtccctggtgttcggcctgctgcggcagaggaagctcgacttcctg
gatatttacagcgaggagatgatcatggcggtgaaggccatcgtctctctgtgtgtggca
gaaaatgttttgcaaattgaagacatcgacactgaagtggtcactaaggttgcggaccag
acccgtctgatgacgttccctcagtggttcgagctgctgaaaagcgtctttgagagtttc
ctcctcttcctgcagcggatcaaggccactcagaccgtgattaaaaacgtggttctggag
gttctggcatcgacgcagaagctccgcctcctggaggaagccgctttagttcaggagggc
ccccccggcccggagcttcttcagggggggggggcggagctggcctacctcacccacgag
gggctgttcatcagcgacgctctgaacgaggcccagcaggggctccaggaccagagctct
gggctccaggaccagagctcggtggggggggcgaggctccagcagagggactccgcctct
ggatacacagagacctccgtcagccgcgagcagagctacatgtccggtgagaacatgatg
ccgtccgacctggagctgaacagagtgacgaacacgctgcaggagcttctgcacacggcc
tccgacgtgagccacgaccgctgcgtcaaagtgctcaccgccagggccaaggacggctct
ctggagcgcctcagctcggcggacttcgtgctgctctctcagacggtggaggggttcgtg
cgggacacggaggatctgagcgggcggaggatcgcctcgctgcggggggcgctgcagagc
caggccaaccgcttcgtgcaccgcttccacgaggagcgcaagaccaaactcagcctcctc
ctggataacgagcgctggaagcaggcggaggttcccgctgagttccaggatctggtgaac
tccatcgctgacggaaggataactctaccggagcgcaaaatcccaggtgcggaggacagg
aagcccacagagtttctgttcgtcaacgggcagaaatacgccgtcgtcgggacggtgctg
ctgctgatccggatctttctggaatactgtcagtgtgtcaacgacatcccatccatcgcc
accgacatgctgacccgtctgtccgacctcctcaagcacttcaactctcggagctgccag
ctggttctgggagccggagctctgcaggtcgtcggcctgaagaccatcaccaccaaaaac
cttgcgttagcctcccgctgcctgcagctggtggttcagtacattcccgtcatcagagct
cactttgagaccaaactgcagcccaaacagtacagcgtgctcagacacttcgaccacatc
accaaggactacaacgaccacatagcggaggtctctgccaagctggtggccatcatggac
agcctgtcggagaaggttctgtcgaagtatgaagtgaaggctccgatgccctcggctgtt
ttcagaaccgtctgcaaacagatggcgaagatgcacgaagccatttctgagctccttcct
gaggagcagacgcagatgttgtttctgaggattaatgccagttttaagctacacctgaag
aggcagctctctcgactcggggtcgttaacgacggaggacctcagaacgggctggtggtg
gtggacgttgcgttctacacggagaacgtgcaggtgctaaagagcctggaccggctggat
ctgaacatggtggagatctgggagcagaagaggtga
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integrated database retrieval system
