Pseudochaenichthys georgianus (South Georgia icefish): 117443266
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Entry
117443266 CDS
T09629
Name
(RefSeq) HEAT repeat-containing protein 5A-like
KO
K24814
HEAT repeat-containing protein 5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117443266
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
117443266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
PDS5
HEAT
TOR1L1_N
T6SS_Tse3_N
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
117443266
NCBI-ProteinID:
XP_071058667
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MMERAHSLLLNEEAFSQLAEHQRAEFIFEWLNHLKKLLPATDRTDLKHNQRRLLDQLSGV
LIGSPGPPTRWLLAHCLALLYRLGDPISACLFVDRCNDIIRSRDDSPSGLPTRLAAIACL
GALFEQLGRMLIGTFKETLTNLLKAMKNAESQGRYEIMLSLEKILQGLGVSAVPCHRDVY
KAARTCLTDRSMAVRCAAAKCLMELQREAVFLWTSELENVATLCFRAFEGSNYSVRVSVS
KLLGTLLAAAVEPQQPTVPRQSGRGRSSLEEVMDLLSGGFLRGGAGFLRASGDMLKGTSS
VSKDIRIGVTQACVVFVSTLGGSWLEANFPAFLSLLMELASHGKATQTAGDAVVTHCCIS
FILRSTLGSLLGEKAQTNAAIQLCLAVAAQKQAIDAALNDGNVETRVSTADISASQHVLV
CCLLELGGLVQGLGSTAAPLLTDSSTALLDTVISVLLHPAPSASLAAAWCLRCVATAMPS
QCSLLLDRCTERLAALKSSPEAVAGYGAAVAALVAAVQHCPLGIPHTKGMMVLSLAEDLL
RSASQSSRISLQRTQAGWLLVSSLITLGPAVVEHHLPRLLLLWRCVFPASLREQEMELRR
GDYFTWQVTLEGRAGALFAMKNLLLHCRELVSDDIVSRLLTPLSCAVALLTKLPALLRSY
GSSVRSWSLIYRLRVYELLALLPPHTYQESFGLVMNQLVSDLSGQNNLNQPCSELTLLPP
LCHRDDLPLVGPALQNTDHRYIEEQLHGSSVGGGSLDNDAFGLCEKSDATPAPLPPPVAL
TAAAARLFGALYPHVISAQRVKILEQFVETVNQLKGQRQQTVQTHVCAALCSLLKHQGCI
RGSLGPEEVRSPALSLLSGALESASPLLRCLAAEGLARLVQVVGDPGFTVSVSLLCFDRL
KTSRDAASRSGYSLALGALHRYTGGISSAQHLSTCLGVLFTLSQDSTSPEVQTWSLHSMS
LVVDLSGGLYRAHAEASFTLVLRLLLSAPPTHPEVHHSLGRCLHALITCLGPDLQGEGAA
VSSLRSSCLIGCGVMQDSPDSLVQARAISCMQQLHMFSPPHVNLASLVPALCEILLDYSL
LAHLCSSYLCLRRAVVACLRQLVQREALEVSEHAVTLVKELPRRDNTQLDVTIKEVGLEG
ALFTLLDRESDPGLRRDIQETLVHMMSSSATSGKLGHWLKLCKDVLSATTGSSPLPLEPS
IVASLRHTCAIIMQSNQHLDMPHLQEDFNGTIPMTVTYQRVDALVRQIVLCGSVVLQQLA
LLGVEALANLVDLCGGGSSGHREGDTGRMPGTNTGNLTQSTMGLARKLLCVPAAGDALVS
VTLGDAIDLVLGEDVVNGLLQLLTAQPTWSEVLPPFSCTSIRGHFFCATGSRRI
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcgagctcacagcctcctgctgaacgaggaggcgttcagtcagctggccgaa
catcagagggcggagttcatcttcgagtggctgaaccacctgaagaagctgcttcctgcc
accgaccggaccgacctcaaacacaaccagcggcgtctgctcgaccagctctcgggcgtt
ctgattggctctcccggcccgccgacccgctggctgctggctcactgcttggccctgctt
taccgcctgggagaccccatttctgcctgcctgtttgtggacaggtgcaatgacatcata
cgcagcagagacgactctccgtcgggactcccgacccgactggcagccatcgcgtgcctc
ggtgctctgtttgagcagctgggtcggatgctgatcggcacttttaaagaaactctgacc
aacctgctgaaggccatgaagaacgcagagtctcagggtcggtatgagatcatgctgagt
ttggagaagatccttcagggtctgggcgtcagcgccgtgccgtgtcatcgtgacgtctac
aaggcggcgaggacgtgtctgacggaccgatccatggccgtacgctgcgccgctgcaaag
tgtctgatggagctgcagagggaggcggtgttcctgtggacgagcgagctggagaacgtg
gccacgctttgcttcagagccttcgaaggatccaactacagcgtcagggtgtccgtctcc
aaactgctggggacgctgctggctgctgctgtggagccgcaacagcccaccgttcccagg
cagagtgggcggggtcgcagctccctggaggaggtgatggatctgttgtcgggggggttc
ctgcgcgggggggccgggttcctacgagccagcggagacatgctgaagggaaccagctcc
gtcagcaaggacatccgcatcggggtcacacaggcctgcgttgtcttcgtctccaccctc
ggaggctcctggttggaggcgaacttccccgccttcctgtcgctgctgatggagctggcg
tcgcacggcaaagccacgcagacggcaggcgatgctgtggtgacgcactgctgcatctcc
ttcatcctgaggagcaccctggggtccctgctgggggagaaggctcaaactaacgccgcc
atccagctgtgcctcgcggtggcggcgcagaaacaagccatcgatgcagctctaaatgat
gggaacgtggagaccagagtttccactgcagacatttcagccagtcagcacgtgctggtc
tgctgcctgctggagctcggaggactcgtacagggactgggatccactgcagcccccctg
ctcactgacagcagcacagccctattggacacggtgatctcggtcctccttcaccccgcc
ccctccgcctctctcgctgccgcatggtgtctacgctgcgttgccacggcgatgccatcc
cagtgttccctgctgctggatcgctgcaccgagcggctggcggcgctgaagtcttcccca
gaagccgtggccggatatggagccgccgtcgccgccctggtggcagcggtgcagcactgc
cccctgggaataccacacaccaaaggcatgatggtgctgagtctggctgaggacctgctg
cgctccgcctctcagagcagccggatctctctgcagaggactcaggccggctggctgctc
gtctcctcgctcatcactttaggcccggctgtagtggagcaccacctgcctcgtctcctc
ctcttgtggcggtgtgtgtttcctgcttcactcagagagcaggagatggagctgagacgc
ggggactactttacgtggcaggttacgctggagggacgtgctggggcgctctttgcgatg
aagaacctgcttcttcactgcagggagctcgtcagcgatgacatcgtgagccgtctgctc
acgcccctctcctgcgccgtcgccctgctcaccaagttgcctgctctcctccggtcttac
ggcagctcagtgcgcagctggtctctgatctacagactgagagtctacgagctgctggct
ctgctgcctcctcacacctaccaagagagttttggtttggtgatgaaccagctggtctca
gatctgtcgggtcagaacaacctgaaccagccgtgttcagagctcacgctgctgcccccc
ctctgtcaccgtgacgacctgcctctcgttggccccgccctccagaacaccgaccacaga
tacatcgaggaacagctccacggcagcagtgtgggaggaggctctctggacaacgacgcc
ttcggcctgtgtgagaaaagtgatgcgactccagctccccttcctcctcccgtcgctctg
accgctgcagctgctcgtctcttcggagcgctttacccccacgtcatctccgctcagaga
gtgaagatattggagcagtttgtggaaaccgtgaaccagctgaagggtcagcggcagcag
acggtgcagacacacgtttgtgccgccctctgcagtctgctcaagcaccagggatgtatc
cgtggctctttgggtccagaggaggttcgctcccctgctctgtctctcctctcgggggcg
ctagagagcgccagtcccctgctcagatgtctggctgcggagggtctggctcggctggtt
caggtggtcggagaccccgggttcaccgtgtccgtctccctgctctgcttcgacaggctg
aagacgtctcgggacgcagcgtctcgcagtggctactccctggctctgggggcgctgcac
cgctacaccggaggaatcagctccgctcaacacctgtccacctgcctgggagtgctgttc
accctgagccaggacagcacctcacctgaggtccagacctggtctctccacagcatgtct
ctggtggtggatctctccggggggttgtaccgcgcccatgccgaggcgtccttcaccctg
gtgctccggctgctgctgtctgccccccccacgcaccctgaggtgcaccacagcctgggc
cgctgcctgcacgccctcatcacctgcctgggccccgacctgcaaggtgagggtgcagcg
gtgtcctctctgcgctccagctgtctgattggctgcggggtgatgcaggacagtccggac
tctctggttcaggccagagccatttcctgtatgcagcagctgcacatgttctcacctcca
cacgtcaacctggccagcctcgtacctgcactctgcgagatcttgttggattattctttg
ttggcccacctgtgcagctcgtacctgtgtctgcgccgggccgtggtggcgtgtctgcgg
cagctggtgcagcgggaggcgctggaggtttctgaacacgctgtgacgctggtcaaagag
ctgcccagacgagacaacacacagctggacgtcaccataaaggaggtgggtctggaagga
gctctgttcactctgctggaccgagagtctgatcccggtctgaggcgggacatccaggag
acgctggtccacatgatgtcctccagcgccaccagcgggaagctgggacactggctcaaa
ctgtgcaaggacgtcctgtctgcaaccaccggttcctcccctctccctctggagccttct
attgtggccagcctaaggcacacctgtgcaataatcatgcagtctaatcagcatcttgat
atgccacacctgcaagaggacttcaacgggacaattcccatgactgtcacttaccagagg
gttgatgctctcgttcgacagatcgtactctgtggaagcgttgttctccagcagcttgcc
ctccttggtgtggaagccctggccaatcttgtagatctgtgtggtggtggcagctcgggc
cacagagaaggcgacacgggaaggatgccaggcaccaatacaggcaaccttacgcagagc
acgatgggtcttgcgaggaagcttctttgtgtgccagcggctggtgacgcccttgtttcc
gtgacccttggtgatgccatcgatctggtcctgggtgaagacgttgtgaacggcctgctc
cagcttctcacggcccagcccacctggtcagaggtgctgcctccgttcagctgcacctcc
atcagaggacacttcttctgcgcaacgggcagcaggcgcatctaa
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