Pseudochaenichthys georgianus (South Georgia icefish): 117443331
Help
Entry
117443331 CDS
T09629
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117443331 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117443331 (lsp1a)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117443331 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Reovirus_cap
Motif
Other DBs
NCBI-GeneID:
117443331
NCBI-ProteinID:
XP_033935207
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSNALLRSNSSKQGLKNLMKLTAQRSVEDAEELERERRRRARESYCWTDGGSMPGETSPE
DGMPAEESMYDGALKPNSSPSLEEDEGFSDWTQRRERRRQQRLQELSQGGEEEEEEENRK
NKSAAVKSVQTSVASSSRLQRQEHHHEDDDEEERVDMERRRKQEEEEFHRAERMRREKEE
EEEKRKKKEVTIRRKAEVKQPKEVEKRKEVKISYTSKVFLNQEAKQSNGDATKEEVTTIK
NQKAKRSTSSRSGEEVEADQELTELKMKREERRRVREEEERRREEEERQKLAHEEITERT
ESLSRSLKKSNSFKKTQPLGLLIKIDDKREQYAHAVENSQEARAVKASLSDLPGSPEVVS
SKKNLFEAGETWSPSRGASCKDTEGLKVGVANRITQWVKGPTDGSRTSLKPADVRPGEVM
QKKNMWEIIGDSTGRPGQSAKGSAAGKKYKFVVTGHGKYEKIPVDEDGEEFADGEDDLYR
DDY
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgctctgctgaggagcaactccagcaagcagggtttaaagaacctgatgaag
ctgacggctcagaggagtgttgaggacgctgaggaactggagagggagcgtcgccgcaga
gcgagggaatcgtactgctggacggacggaggatcgatgcccggagaaacatcgccggag
gacgggatgccggcagaggagagcatgtacgatggcgccctgaagccgaacagctctccg
tctctggaggaggacgagggcttcagtgattggacgcagagaagagagaggaggaggcag
caacgcctgcaggaactcagccagggaggagaggaagaggaggaagaggagaacaggaag
aacaaatctgcagccgtgaagtccgtccagacctccgtcgcctcctccagccgactgcag
agacaggagcaccaccacgaagacgatgacgaagaggaaagggtggacatggagaggagg
aggaagcaagaagaggaagagtttcatcgagctgagaggatgaggagggagaaagaggag
gaagaggagaagaggaagaagaaggaggtgacgatcaggaggaaggcggaggttaaacag
ccgaaagaggtggagaaaagaaaggaagtgaagatctcctacacgtccaaggtgttcctg
aaccaagaggcgaaacagagcaacggagacgcgaccaaagaggaagtgacgaccatcaag
aaccagaaggcaaagagatccaccagcagcagatctggagaggaggtggaggcggatcag
gagctgacggagctgaagatgaagagggaggagaggcgtagagtccgtgaggaagaggag
cggcgcagggaggaagaggagcgtcagaagctggcccacgaggagatcacagagaggacc
gagtctctgagccgctcactgaagaaaagtaacagcttcaagaagacacagccgctcggt
ctgcttatcaagatcgacgacaagagggagcaatacgcacacgccgtggagaactcccag
gaggcgagggcagtgaaggcatcactgagcgacttacctggctcacctgaggtcgtttcc
tccaagaagaacctgtttgaggccggagagacttggagtcccagcaggggggccagctgc
aaggacactgaggggttgaaggtgggcgtggccaatcggatcactcagtgggtgaagggg
ccgacggacggcagcagaacatcgcttaaacccgcagacgtgaggcccggagaggtgatg
cagaaaaaaaacatgtgggagattatcggagactctacagggagaccaggacaaagtgct
aagggctcagcagctggtaaaaagtacaaatttgtcgtcactggtcacggaaaatatgag
aagatccccgtggacgaggatggagaagagtttgctgacggagaagacgatttatatcgt
gacgattactga
DBGET
integrated database retrieval system
