Pseudochaenichthys georgianus (South Georgia icefish): 117443436
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Entry
117443436 CDS
T09629
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117443436 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117443436 (vcpip1)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117443436 (vcpip1)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C64
117443436 (vcpip1)
Ubiquitin system [BR:
pgeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
117443436 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117443436
NCBI-ProteinID:
XP_033935314
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MSLLQSNKKKDRRILSGSCPDPRCGARLFFPSGSASIECTECGQRHEQKHLLRVEEVTDP
DLVLHNLLRNALLGVTGAPKKGSELVKVMGLSNYHCKLLSPVLTRYGMDKQTGRAKLLQE
MNQGEMFDCSLLGDRAFLIEPEHVSTMGYGKDRSGSLVYLHDTLEEVKKANGSMECLIPV
HVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKALFQDFIDAAEWEDIIN
ECDPMFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLMAEEK
CRGKDEKLNKPICIAWSSSGRNHYIPLVGIKNTVLPRLPARLLPKAWGVPQDLIRKYIEL
EPDGSCTIGGDRSLQDKYLMRLVNAMEEVFMEKHSIHPSLVADVHQYVYRRTGVIGIQPE
EVTEAAKRSVMENRLHRCLICGALSELHVPPEWLLPGGKLYNLAKSTHGQLRPDKNYSFP
LNNVVCSYDPQKDVLIPDYKMSSLNTCNWCHGTSVRHIHGDGAVVYLDGDRTNTRSDGGK
CGCGFKHFWESKEYDNLPEAFPITLEWGGRVVRETVYWFQYEVEATLNSNVYDVAMKLVT
KHFPGEFGSETLVQKVVNTILHHTAKKNPDEYNPVSIDGAHDQRLTDAMDQQPPTKIILT
GQKSKTLHKEELTMSRAERSLQQSISDQAFVTQRRRTDKLKQEQKGNRRSSSPTGSPETS
SSSSAPATPTKTSSSPSSNEKKIRVTTSDGRQAMLTLHAVTTFSELQRRISTQFNVPPSQ
QQCIRYGFPPKELLRPRDGEENEPVALQHGDRVTVEILKVLEEEQGPPAVTPPSSHSVLH
SEKRSEETSSGRELQESIDLEMSSLCLLATLMGEDVWSYAKKLPHLFQQGGVFYNIVKKD
MGLLDGKHCSLPHLTGKTFVFNAAAERLDLCVDAAGHFPVSPEVEEQVKEALLQLQVRSE
ASGGNRESSEASGVLRLGGGGVVRKKESFQSLNAFQGRGHSLGSSSPPEHRPITRQHSSG
VDLSSSVTRGAPDLSQIPELVRMAPGFVRMKEGGRPDPGLMEQQRRQLQDMVSSIQASME
RHLREGTTASTVT
NT seq
3281 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgctccagagcaacaagaagaaggaccggcggatcctctccggctcgtgcccg
gaccccaggtgcggcgcgcggctcttcttcccctcgggctccgcgagcatcgaatgcacg
gaatgcggccagcggcacgagcagaaacacctgctgcgcgtggaggaggtaacggacccg
gacctggtgctccacaacctgctcagaaacgccctgttgggggtcacgggggccccgaag
aaaggctccgagctggtgaaggtgatggggctctctaactaccactgtaagctactttcc
ccggtgttgacccgttacggcatggataaacaaaccggaagagccaaattgctgcaggaa
atgaaccaaggcgagatgtttgactgctccctgctgggcgacagagcgtttctcatagaa
ccagaacatgtgtccactatgggttatggaaaagacagatctgggagcttagtttacctc
catgacactctggaggaggtgaagaaggccaatggcagcatggagtgtttgatcccggtc
catgtggatggagacgggcactgtctggtccacgccgtgtcccgagcgctggtgggaaga
gaactgttctggcacgctctgagggagaacctgaagcagaacttcaagcagaacctggac
cgctacaaggcgctttttcaggatttcatcgacgccgcagagtgggaagatatcatcaac
gagtgcgacccgatgttcatcccgccggaaggagtgccgctcgggctgagaaacatccac
attttcgggttagccaacgttctgcaccgacccataatcctgctggactccctgagtggg
atgaggagctccggggattattctgccacctttctacccgggttaatggccgaggagaag
tgcagggggaaagacgagaagctcaacaaacccatctgtatcgcctggagcagctctggg
agaaaccattacatccctctggtggggataaaaaacacggttctgccccgactgccggct
cgtttgcttcccaaagcgtggggcgtccctcaggatctcatcaggaaatacatcgaactg
gagccggacggcagctgtacgatcggaggagatcgtagtcttcaagataaatacttgatg
cgcctggtgaacgccatggaggaagtgttcatggagaaacacagcatccacccgtcactc
gtggccgacgttcaccagtacgtgtaccggcgcacgggcgtgataggcatccaacccgag
gaggtgacggaggcggcgaaacggtccgtgatggagaaccgtttgcatcgatgtttgatc
tgcggcgccttgtccgaactccacgtccccccggagtggcttcttccaggcgggaaactt
tacaatctcgccaaatccactcacggtcaactgcgtcccgataagaattacagcttcccg
ctcaacaacgtggtctgctcctacgacccccagaaagacgtgctcatccccgattataaa
atgagttccttgaatacgtgcaattggtgtcacggtacgtcggtgcgtcacatccacggc
gacggggcggtggtttacctggacggggatcgaaccaacactcgatccgacggagggaaa
tgcggatgcggtttcaaacacttctgggagtccaaagagtacgataatctccccgaggct
ttccccatcacgctggagtggggcggtcgcgtggtcagagagacggtttactggttccag
tacgaggtcgaggcgacgctgaacagcaacgtgtacgacgtggccatgaaactcgtcacc
aaacacttcccgggggagtttggcagcgagacattggtgcagaaggtggtcaacaccatc
ctgcatcacaccgccaagaagaacccggacgagtacaacccggtgtccatcgacggagct
cacgaccagcgcctcaccgacgctatggaccaacagccgccaacgaagatcatcctgacc
ggccagaaatcaaagacgctgcacaaggaggagctgacgatgagccgagcggagcgcagc
ctccagcagagcatcagcgatcaggccttcgtcacgcagaggcgccggacagacaagctg
aagcaggagcagaaggggaaccgtcgttcttcatcacctactggatctccagaaacatcc
tcctcttcttcagcgcccgccacccccaccaaaacatcctcctccccctcctccaatgag
aagaagatccgcgtgacgacgagcgacggccggcaggcgatgttgacgctccacgccgtc
accaccttctccgagctgcagaggaggatctccacgcagttcaacgtgcctccgtctcaa
cagcagtgcatccgatacggtttcccgcctaaagagctgctccgcccgcgggacggagag
gagaacgagccggtggcgctgcagcacggagacagagtgacggtggagatcctgaaggtg
ctggaggaggagcagggaccccccgcggtgactccccccagctctcactctgtgctgcac
tctgagaagaggagcgaggagacatcgagcggccgggagctgcaggagagcatcgacctg
gagatgtcctccctctgcctcctcgccaccttgatgggtgaagacgtctggtcgtacgct
aagaagctgccgcacttattccagcagggcggcgtcttctacaacatcgtgaagaaggac
atgggcctgctggacgggaagcactgctcgctgcctcacctgacggggaagaccttcgtg
ttcaacgcggcggcggagcgtctggatctctgcgtggacgcggccgggcacttccccgtg
agcccggaggtggaggagcaggtgaaggaggcgctgctgcagctgcaggtgcgctccgag
gcctccgggggcaacagagagagcagcgaggcgtccggcgtgctgaggctcggaggagga
ggcgtggtgcggaaaaaagagtcgtttcagagcctcaacgctttccaggggagaggccac
tctctaggaagctcctcccctccggagcaccgtccaatcacgcggcagcacagcagtggc
gtggacctgagctccagcgtgacacgaggagctccagatttgtcccagatcccagagctg
gtgcgcatggcgccgggcttcgtgaggatgaaggagggcgggcgccccgacccgggtctg
atggagcagcagcgccgccagctgcaggacatggtgtccagcatccaggcctccatggag
cggcacctgagggaggggacgaccgccagcaccgtcacgag
DBGET
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