KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117443578
Entry
117443578         CDS       T09629                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04137  Mitophagy - animal
pgeo04144  Endocytosis
pgeo04145  Phagosome
pgeo04148  Efferocytosis
pgeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117443578 (rab5b)
   04145 Phagosome
    117443578 (rab5b)
   04137 Mitophagy - animal
    117443578 (rab5b)
   04148 Efferocytosis
    117443578 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117443578 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pgeo04131]
    117443578 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgeo04147]
    117443578 (rab5b)
   04031 GTP-binding proteins [BR:pgeo04031]
    117443578 (rab5b)
Membrane trafficking [BR:pgeo04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117443578 (rab5b)
 Endosome - Lysosome transport
    117443578 (rab5b)
Exosome [BR:pgeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117443578 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   117443578 (rab5b)
  Exosomal proteins of colorectal cancer cells
   117443578 (rab5b)
  Exosomal proteins of melanoma cells
   117443578 (rab5b)
GTP-binding proteins [BR:pgeo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117443578 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 B12-binding Tfb2_C
Other DBs
NCBI-GeneID: 117443578
NCBI-ProteinID: XP_033935354
LinkDB
Position
Unknown
AA seq 216 aa
MSSRGSGGRTNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPDTFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEDAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSNRSCCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagagggagtggaggccgcaccaacggcacactgccacaaaccaagatctgc
cagttcaagctggtgctgctgggggacatggcggtgggcaagtccagcctcgtgctgcga
ttcgtcaaagggcagtttgacgagttccaggagacgaccataggagcggcgttcctggct
cagtcggtgtgtttagacgacaccacagtgaagtttgagatctgggacacggcgggacag
gagcgctaccacagcctcgcccccatgtactacagaggagctcaggccgccatcgtggtc
ttcgacatcaccaagccggacacctttgagcgagcgaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacatcgtgatcgcgctggctgggaacaaggcggacctggcagag
aggagactagtggagtacgaggacgcccagacgtacgctgaagacaccggcttgctcttc
atggagacctctgctaaaacagccatgaacgtcaatgagctcttcctggctattgcaaaa
aagatgccaaaaacagacacccagaaccccacacatgcagcgcgacaccggggagtgaac
ctccaggatccggacgcccactccaaccgatcctgctgcggggggaactaa

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