Pseudochaenichthys georgianus (South Georgia icefish): 117443718
Help
Entry
117443718 CDS
T09629
Symbol
tars3
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117443718 (tars3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgeo01007
]
117443718 (tars3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117443718 (tars3)
Enzymes [BR:
pgeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
117443718 (tars3)
Amino acid related enzymes [BR:
pgeo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117443718 (tars3)
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117443718 (tars3)
Prokaryotic type
117443718 (tars3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
117443718
NCBI-ProteinID:
XP_033935503
LinkDB
All DBs
Position
3:49664566..49700127
Genome browser
AA seq
824 aa
AA seq
DB search
MAECMAARLAAQEEQIRLLSGEISSLRDGLSQGLDAGVGAKVTPELESLRTENEKLRYRL
LHLRRALKEELQKQEKGGGTPEKHTNKEQNNNKEKQNINNRAEKNTNKETNNRAEKKVVT
VDTKSCDGNNKKEKKPDKGQAKGGVREQKSLPGFVAERLGLYEQLKRESDALLEERAKNS
KPISVELPDGGKVEARAWVSTPYQLACNISQGLADNAVISRVNGELWDLDRPLEHDCSLE
ILRFDNEDAQAVYWHSSAHILGEAMENFYGGCLCYGPPIENGFYYDMFLDGQKGVSSTEF
GDLESLCKAVVKEKQPFERLEISKETLLKMFKYNKFKCRILNEKVTTPTTTVYRCGPLID
LCRGPHVRHTGKIKAMKIYKNSSTYWEGRSDMETLQRIYGISFPDSKMLKEWERFQEEAK
NRDHRKIGKDQELFFFHDLSPGSCFFLPRGAFIYNTLTEFIREEYWRRGFQEVASPNIFN
SKLWETSGHWQHYSDNMFSFPVEDDIFALKPMNCPGHCLMFSHRPRSWRELPLRFADFGV
LHRNELSGTLTGLTRVRRFQQDDAHIFCTMEQIESEMKGCLDFLRCVYNVFGFSFQLHLS
TRPEKYLGDIAVWNQAEKQLENSLNDFGEPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCA
TIQLDFQLPIRLNLTFVGTDGDDKARPVIIHRAILGSVERMIAILTENYAGKWPLWLSPR
QVMVVPVNTSFEDYAKKVCEQFTEAGFMADADLDSGCLLNKKIRNAQLAQYNFILVVGEK
EKMTNGVNVRTRDSKVHGELSVSEVLARLTLLKQSRCANAEEEF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtgcatggccgcacgtttggctgctcaggaggagcagatacggctcctctcg
ggagaaatatcctctcttagggacggactgagtcagggtctggatgccggtgttggtgcg
aaggttaccccggagctggagagcctgaggacggagaatgagaagctccggtaccggcta
ctgcacctccggagggctctgaaggaggagctgcagaaacaagagaagggggggggaact
ccggagaaacacaccaacaaggagcaaaacaacaacaaggagaagcagaacataaacaac
cgggctgagaaaaacaccaacaaggagactaacaaccgggctgagaaaaaggtggtaacc
gtggataccaaatcatgtgacgggaacaacaagaaggagaagaagccggacaagggtcaa
gcaaagggaggcgtaagagagcagaagtcgttgccaggattcgttgcagagcgcctcggt
ctgtacgagcagctgaagagggagagtgatgctctgctggaggagagagcgaagaacagt
aaaccaatcagtgtggagctgcctgacggaggaaaggtggaggcaagagcctgggtcagc
accccgtaccagctggcctgtaacatcagccagggcctggccgacaacgctgtgatttct
cgtgtgaacggagagctttgggacctggaccgcccgctggagcacgactgctctctggag
atcctacgcttcgacaacgaggacgctcaggctgtgtattggcactccagtgctcacatc
ctgggggaggcgatggagaacttctatggaggctgtttgtgttacggaccccccattgag
aacggtttctactacgacatgttcctggatggacagaagggagtctccagcactgagttt
ggggacctggagagtttgtgtaaggccgtggtgaaggagaaacagccgtttgagaggctg
gaaatcagcaaggagacgctgctgaagatgtttaagtacaacaaattcaagtgtcgcatt
ctgaatgagaaggtcaccacccccacaactacagtgtacagatgtgggcccctgattgac
ctgtgcagaggtcctcatgtgagacacacaggcaagattaaagccatgaagatctacaag
aactcctccacctactgggagggccgctccgacatggagacactccagaggatctatggg
atttccttcccagactcaaagatgctgaaggagtgggaacgctttcaggaggaggccaag
aacagagaccaccgcaagatcggaaaagaccaggagctgttcttcttccacgacctcagc
cctggaagctgcttcttcctgcccagaggagcgttcatctacaacacgctgaccgagttc
atccgggaagagtactggagaagaggcttccaggaagtagcctcccccaacatcttcaac
agtaaactgtgggagacgtctggccactggcagcactacagcgacaacatgttctccttc
cccgtggaggacgacatcttcgcactgaaacccatgaactgccccgggcactgtctgatg
ttcagccacaggcctcgctcgtggagggaacttcctctgaggtttgcagatttcggggtc
ctccacaggaacgagctgtcgggaacgctgaccggtttaacccgtgtgaggcgcttccag
caggacgacgctcacatcttctgcaccatggagcagatcgagtcggagatgaagggctgt
ctggatttcctccgctgcgtctacaacgtgttcggattctccttccagctgcacctgtcc
acgcgcccagagaaatatctgggagacatcgccgtgtggaaccaggcggagaagcaactg
gagaacagcctgaatgactttggggagccatggaaactgaaccctggagacggagctttt
tatggacctaagattgacattaagatcaaagatgcgattggacgttaccatcagtgtgcg
accattcaactggacttccagctgccaatccgcctcaacctgacctttgtggggacggac
ggagacgataaagcccgaccggtcatcatccatcgggccatcttaggctcggtggagcgg
atgatcgccatcctcactgagaactacgcagggaaatggcctctgtggctctctcctcgt
caggtgatggtcgtgcccgtcaacacgtcctttgaggattacgcaaagaaagtgtgtgag
cagtttacagaagctggcttcatggcggatgctgacctcgactccggctgtctgctgaac
aagaagatccgcaacgctcagctggcccagtataacttcattctagtggtcggggagaag
gagaagatgactaacggcgtcaacgtgcgcacacgagacagcaaagtccacggagagctg
tcggtgtccgaggtgctggcccgcctgaccctgctcaaacagagccgctgtgcaaacgcc
gaggaggagttctga
DBGET
integrated database retrieval system
