Pseudochaenichthys georgianus (South Georgia icefish): 117444072
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Entry
117444072 CDS
T09629
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117444072 (irx3a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117444072 (irx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
117444072
NCBI-ProteinID:
XP_033935683
LinkDB
All DBs
Position
3:48144584..48147942
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AA seq
424 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGISSNARAGTELSPSGALSNVLSSMYGSPFAAAAQGYGAF
LPYSNDISIFNQLGAQYELKDSPGVQHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNRTD
EEGNVYGSDHEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHSDMKLDGRSDSEI
SDGYEDLQGPPDHQRFLKAVGKEGKDVERGAEHFHHHHHHHLDTKASQANGEQLKLNAVS
VSSPENIPAPVQKPKIWSLAETATAPDNPRKSPHMNGSHSAGPVGAQTIMAPHRLISSCP
VGKIQNWTNRTFSAHQLALLNSNHYLGLANQATATGLALYSSSRQTEDKSHSSETSVTGT
CPRH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctgggatatcagtacatccgaccgatatacccgccggagcgccag
gggatctccagcaatgcccgggccgggacagagctcagtccgtccggcgcgctctccaac
gtcctctcctccatgtatggatctccttttgccgcagcagcgcagggctatggagcgttt
ctgccctactcaaacgatatatcaattttcaatcagttgggtgctcagtatgagctgaaa
gacagtcccggggtccagcacccaggttttgcccaccaccaccctgcgttttacccatat
ggccaatatcagttcggtgacccgtccagacccaaaaacgccacgagggagagcaccagc
accctgaaggcctggctcagcgagcaccgcaagaacccctaccccactaaaggagagaag
atcatgctggccatcatcaccaaaatgaccctcacacaagtgtccacctggttcgccaac
gccaggcggaggctaaagaaggagaacaagatgacctgggcccctcggaaccgcaccgac
gaagaggggaatgtttacggcagcgatcacgagggggaggagggggacaagagggaggac
gaggaggagatcgacctggagaacatcgacacggaaaatattgaaaacaaggacgacttg
gacgaccaggacgacctgcattcagatatgaaactagacgggaggagtgactctgagatt
tctgacggctatgaggatttacaagggcccccagaccaccagaggtttctgaaggctgtg
gggaaagagggcaaagacgttgagagaggagcagagcacttccaccaccatcatcatcat
cacttggacacaaaagcgtcccaagcaaacggtgagcagctcaaactgaacgcggtatcc
gtgagctcaccggaaaacatccctgccccggtccagaagccaaagatctggtctttggca
gagacagccacggcccctgacaatccccgcaaatcgccacacatgaacggcagccactcc
gcagggcccgtcggcgctcagaccataatggcccctcatagacttatctcttcttgtccc
gttgggaaaatccagaactggacgaaccgaaccttctcggcgcatcagctggcattactg
aactctaaccattacttgggactcgcaaaccaggccacagccaccggccttgccctgtac
agcagcagcaggcaaacggaggacaagagtcatagttcagagacttcagtcacaggtaca
tgtccccgacactga
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