Pseudochaenichthys georgianus (South Georgia icefish): 117444257
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Entry
117444257 CDS
T09629
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117444257 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117444257 (u2surp)
Spliceosome [BR:
pgeo03041
]
Complex A
U2 snRNP components
U2 related factors
117444257 (u2surp)
Complex B
117444257 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
117444257
NCBI-ProteinID:
XP_033935810
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MADRTPGGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEE
FLAAFEGGGDGKVKAFVRGGIANATKEEAAADEKKGRLYKPKSRFENQPTKGFLPLDTPA
QFIPVDKRQALKKAAEKEKKKSNLELFKEELKQIQEERDERHKLKGRVSRFEPLAGAEGG
RASADGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLA
SVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPH
PIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNATLLPPPKNKEEFEKTLSQAIVKVVI
PTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYRWKIYTIL
QGEAPVKWKTEDFRMFKNGSLWHPPPLNPYLHGPYDDGEEEEVEEEAGKKGCLKEDERDK
LEEMLRGMSPRRGDIAEAMLFCLSHAEAAEEIVECVTESLSILKTPLPKKIARLYLVSDV
LYNSSAKVSNASYYRKYFEAKLSQIFADLNATYKAIQGHLQSENFKQRVMACFRAWEDWA
VYPDPFLIKLQNIFLGLVNIAAVEKEVPVLIVEAEPAEDIDGAPIGEYADVGLMEDVDGV
PIDGGHIDGAPIDGAPLDDLDGVPIKPMEEDIDGIPLDPSKEATFKVAPSKWEAVDEAEL
EAQAVTTSKWEVFEQPEESKKNDHDSDDEDRSPRSEDNGTYCNPSRDESDVKAKMSEMNE
EKRTKLREIEVKVMKFQDELESGKRPKKTGQSIQEQVEHYRDKLLQKEKEKEKLEREKER
ERKEKEKAEARLKELKKEKEDTPTRKERKRRHSGSPSPTRNSRRGRSASPRSERSERSYS
KDTSSRSTHKDSPRSSIKKSTKRSPSPRTPKRSRRSRSKTPKKSTKKSRSKSRSPHRSHK
KAKKSKH
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggacgcctggcggctctcagaaagccagcgctaaggcgctgctggagagc
aaactgaagtctttcagcatcggcaaaatggcagtggcgaagcggaccctgagcaagaag
gagcaagatgaaataaagaagaaggaggacgagcgagcggcagcagagatctatgaggag
ttcctcgctgcctttgaaggaggaggagacggcaaagtcaaggcctttgtgcgtggcggg
attgcaaatgcaacaaaagaggaggccgctgctgatgagaagaaaggacgactctacaag
cccaagtctcgttttgagaaccaaccgacaaaaggcttcttgcctttggacacaccagct
cagtttataccagtagacaaaagacaagctctgaagaaggcggctgaaaaggagaagaag
aaaagcaacttggagctttttaaagaagaacttaagcaaatccaggaggaacgggatgaa
agacacaagttgaaaggacgcgtcagtcgcttcgaacctctcgcgggcgctgaaggtgga
cgtgcttctgcggatggttcttcaagaagaaaccgtccgtcaagtgttctggatgattgt
gcgccgggatcacacgacgtcggagacccgtccacgactaacctgtacctcggaaacatc
aacccacagatgaacgaggagatgctgtgtcaggagtttggccgctatggcccgctggcc
agtgtgaagatcatgtggccgaggacggacgaggagagggctcgggagaggaactgtggc
ttcgtggcgttcatgaacaggagggatgccgagcgagcgctcaagaacctcaatggaaag
atgataatgaactttgagatgaaattaggatggggcaaaggagtgcccattccccctcac
cccatctacatccctccgtccatgatggagcacaccctccccccgcctccctccggcctc
cccttcaacgctcagccccgcgagaggctgaagaaccccaacgccacactccttcctccg
cccaaaaacaaggaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatc
ccaacagaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgtgaa
ggcccaatgtttgaagccatgatcatgaacagagaaatcaacaaccccatgtacaggttt
ctatttgagaaccaaagcccagcacacgtatactaccggtggaagatctacaccatacta
cagggtgaagcgccagtcaaatggaaaacggaggactttaggatgtttaagaacggctcc
ttgtggcacccgcctcctctgaacccgtaccttcacggtccgtatgatgacggggaggaa
gaggaggtcgaggaggaggccggcaagaaaggctgtttgaaagaagacgagcgggacaaa
ctggaggagatgctgcgagggatgagtcccaggagaggagacatcgcggaggccatgttg
ttttgtctgagccacgcagaagcagccgaggagatcgtggagtgcgtcaccgagtctctc
tccatcctcaaaacgcctctgcccaagaagatcgcacggttatacctagtgtctgatgtg
ctgtacaactcctcggccaaagtgtccaacgcgtcttactacagaaaatattttgaggca
aagctctcgcagatatttgcagacctcaacgcgacgtacaaagcgattcagggacacctt
cagagcgagaacttcaagcaacgcgtcatggcgtgtttccgcgcctgggaggactgggcc
gtgtaccccgacccgttcctcatcaagctgcagaacatcttcctcgggctggttaacatc
gcagccgtggagaaggaagtccccgtcctcatcgtggaggcggagccggcagaggacatc
gacggcgctcccataggggagtatgccgatgtgggtctgatggaggacgtggacggcgtc
ccgatcgacggcggacacatcgacggggctccgatcgacggagcgccgctggacgacctg
gacggtgtccccataaaacccatggaggaagacatcgatgggatacctttggatccatca
aaggaggcgactttcaaggtagcaccgtcgaaatgggaagcggtggatgaagccgagtta
gaagctcaagctgtgacgacttccaaatgggaggtttttgagcagccggaagaatccaaa
aagaacgatcatgacagtgatgacgaggacaggagcccccgctcagaggacaacgggacc
tactgcaacccctccagagacgagtctgatgtgaaagccaagatgtctgaaatgaacgag
gagaagcgcaccaagctccgagagatagaggttaaagtcatgaagttccaagatgagctg
gagtctgggaaaagacccaagaagacggggcagagcattcaggagcaggtggagcactac
agggacaaactactacagaaggaaaaggaaaaggagaaactcgaacgggagaaagagcgg
gagaggaaagagaaggagaaagctgaggcccggttgaaagagttaaagaaggagaaggag
gacacgcccaccaggaaggagaggaagcgtcgccacagtggttcgcccagtccgacgcgg
aacagcagacgaggtcgatcagcttctccccgttcggagcgatcggagcgctcgtactct
aaagacacgtcgtcccggtccacccataaagactcgccgcgatccagcatcaagaagtcc
acgaagagatctccctcacctcgcacacccaagcgatccagacggtcgcgctcaaagacg
cccaaaaagtccaccaagaagtcccgctccaaatctaggtcccctcatcggtcccacaaa
aaagcgaagaaaagcaaacactga
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