Pseudochaenichthys georgianus (South Georgia icefish): 117444564
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Entry
117444564 CDS
T09629
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117444564
Pattern recognition receptors [BR:
pgeo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117444564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
LRR_4
SPRY
Motif
Other DBs
NCBI-GeneID:
117444564
NCBI-ProteinID:
XP_033935923
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MDLEPGPEPGPGPGSGPEPGPGPGPVSSKSSMEPQSADGGVQQQRADSPSCLSFKSDRSK
DDFIDFKGRPPSADQRVQQQRADSPSCLSFKSDSSKEDFINFKGRPPSADQRVQQQRADS
PSCLSFKSDWSKDAIISFKERPPSADQRGDQESSEVPGGQSAQQHQTQLDSIFTLLEDHV
VSFVKSELKKFQKTLGSDYPECLESEDEEGLEAEEEEQRSSREAFLNITLHFLRSMEQEE
LAERLHRRTFAAECPRKLKSTLKERVQCVFEGIAKAGNPTLLNQIYTELYITEGGSAEVN
AEHEVRQIETASRKPDRPETTVRQEDLFKASPGRDAPIRAVLTKGVAGIGKTFLTQKFTL
DWAEGKANQDIQFIFPFTFRELNVVRENRYSLVELVYHFFPETRDAGICRFDRFPVVFIF
DGLDESRLPLDFLNTEVLTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPE
CVHMVTEVRGFTDPQKEEYFRKRFRDQKQAGTIISHIKTSRSLHVMCHIPVFCWISASVL
EEVLKTRGGGKLPKTLTEMYIHFLVVQSKVKNVKYDGGAETDPHWSPESRKMMEALGKLA
FEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFREESRLYQDKVFCFVHLSVQEFL
AALHVHLTFISSGVNLLAEEPATSQKSEVQPELTHLYQSAVDQALRSPNGHLDLFLRFLL
GLSLQTNQKLLRGLLIQTGSGSETNQETVQYIKEKMEEGLSAERSINLFHCLNELNDRSL
VEQIQLYLRSGRLFRDNLSPAQWSALGFILLSSGEDLDVFDLKKYCASEEALLRLLPVVN
ASRKALLSGCDLSARSCAALYSVLSSQSSSLRELDLSNNDLQDLGVKLLSAGLESPLCEL
KTLRLSGCELSERSCAALSSVLSSQSSSLRDLDLSNNDLQDSGVKLLSAGLESPLCDLKT
LRLSGCELSERSCAALSSVLSSQSSSLRDLDLSNNDLQDSGVKLLSAGLESPLCDLKTLR
LSDCELSERSCAALSSVLSSQSSSLRELDLSNNDLQDSGVKLLSAGLESPLCDLKTLRLS
GCLITEEGCDALASALNPSHLRELDLSYNHPGASGGRLLSAGLDTLSLEPAAARFLRPGL
RKYSCGLTLDSNTAHINLKLSDYSRKVTDVRDDQNYPDHPERFYYWPQLMCTEALSDRCY
WEVECRGEVHIAVTYRGIRRRGESEACWFGRNDQSWSLECSPKGYSVWHNERETVISSSS
LLDHVSSYMLSPLLLSSGRVAVYLDHPAGSLSFYRVSSDSLTHLHTFRTTFTEPLYAGFG
FRFGFLSFSGASVSLCAL
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaacctggacccgaacctggacccggacctggatccggacctgaacctgga
cccggacccggacctgtgtcctccaagagctcaatggagcctcaatctgctgatggcggg
gtccagcagcagagagcagactctcccagctgtctgtccttcaagagcgaccggtcgaag
gacgacttcatagactttaaaggacgacctccatctgctgatcagagggtccagcagcag
agagcagactctcccagctgtctgtccttcaagagcgactcgtcgaaggaagacttcata
aactttaaaggacgacctccatctgctgatcagagggtccagcagcagagagcagactcc
cccagctgtctgtccttcaagagcgactggtcgaaggacgccatcataagctttaaagaa
cgacctccatctgctgatcagagaggggaccaggagagctcggaggttcccggtggtcag
tctgcccagcagcatcagacacagctggactccatattcacgctgctggaggaccacgtc
gtctcctttgtgaagagcgagctgaagaagttccagaagactctgggttcagattaccca
gaatgcttagagagtgaggatgaggaggggttggaggctgaggaggaagagcagaggagc
agcagagaggcattcctgaacatcacactgcacttcctgaggagcatggagcaggaggag
ctggctgagcgtctgcaccgcagaacctttgctgcagagtgtccgcgtaaacttaagtcc
accctgaaggagagggtccagtgtgtgtttgagggcatcgctaaagcaggaaacccaacc
cttctgaaccagatctacacagagctctacatcacagagggggggtctgcagaggtcaat
gctgaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaaaca
accgtcagacaagaagacctctttaaagcctcacctggaagagatgcaccaatcagagca
gtgctgacaaagggcgtggctggcattgggaaaacattcttaacacagaagttcactctg
gactgggctgaaggcaaagccaaccaggacatccagttcatatttccattcaccttcaga
gagctgaacgtggtgagagagaacaggtacagcttggtggaacttgtttatcacttcttc
cctgaaaccagagacgcaggaatctgcaggttcgatcggttcccggtcgtgttcatcttt
gacggtctggatgagagtcgacttcctctggacttcctcaacactgaggtcctgactgac
gtcacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaagctgctt
ccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgag
tgtgtgcacatggtgacagaggtccgagggttcactgacccacagaaggaggagtacttc
aggaagagattcagagatcagaagcaggccggcaccatcatctcccacatcaagacctca
cgaagcctccacgtcatgtgccacatcccagtcttctgctggatctctgcttcagttctg
gaggaggtgttgaaaaccagagggggaggaaagctgcccaagaccctgactgagatgtac
atccacttcctggtggttcagtccaaagtgaagaacgtcaagtatgatggaggagccgag
acagatccacactggagtccagagagcaggaagatgatggaggctctggggaaactggct
ttcgagcagctgcagaaaggcaacctgatcttctacgagtccgacctgacagagtgtggc
atcgatatcagagcagcctcagtgtactcaggagtgttcacacaggtcttcagagaggag
agcagactgtaccaggacaaggtgttctgcttcgtccatctgagcgttcaggagtttctg
gctgctcttcatgtccatctgaccttcatcagctctggggtcaacctgctggcagaagaa
ccagcaacctcccagaagtctgaggtccaacctgaactaacacatctctaccagagtgct
gtggaccaggccttacggagtccaaacggacacctggacttgttcctccgcttcctcctg
ggtctttctctgcagaccaatcagaaactcctacgaggcctgctgatacagacaggaagt
ggctcagagaccaatcaggaaacagtccagtacatcaaggagaagatggaagagggtctg
tctgcagagagaagcatcaacctgttccactgtctgaatgaactgaatgatcgttctctg
gtggagcagatccaactgtacctgaggtcaggacgtctcttcagagataatctgtctcct
gctcagtggtcagctctgggcttcatcttgctgtcatcaggagaagatctggacgtgttt
gacctgaagaaatactgtgcttcagaggaggctcttctgaggctgctgccagtggtcaac
gcctccaggaaggctctgctgagtggctgtgacctgtcagcgagaagctgtgcagctctg
tactcagtcctcagctcccagtcctccagtctgagagagctggacctgagtaacaacgac
ctccaggatttaggagtgaagctgctgtctgctggactggagagtccactctgtgaactg
aagactctcaggctgagtggctgtgagctgtcggagagaagctgtgcagctctgtcctca
gtcctcagctcccagtcctccagtctgagagatctggacctgagtaacaacgacctgcag
gactcaggagtgaagctgctgtctgctggactggagagtccactctgtgacctgaagact
ctcaggctgagtggctgtgagctgtcggagagaagctgtgcagctctgtcctcagtcctc
agctcccagtcctccagtctgagagatctggacctgagtaacaacgacctgcaggactca
ggagtgaagctgctgtctgctggactggagagtccactctgtgacctgaagactctcagg
ctgagtgactgtgagctgtcagagagaagctgtgcagctctgtcttcagtcctcagctcc
cagtcctccagtctgagagagctggacctgagtaacaacgacctgcaggactcaggagtg
aagctgctgtctgctggactggagagtccactctgtgacctgaagactctcaggctgtca
ggctgtctgatcacagaggaaggctgtgatgctctggcctcagctttaaacccctcccat
ctgagagagctggacctgagctacaatcatccaggagcctcaggggggaggctgctgtct
gctggactggacacgctcagcctggagcctgctgcagcccggttcttgaggccaggcctc
aggaagtattcctgtggactcacactggactcaaacacggcacatataaatctcaaactg
tctgactacagcaggaaggtgacagatgtgagagacgatcagaactatcctgatcatcca
gagaggttttactactggcctcagctgatgtgcacagaagccctgagcgatcgctgctac
tgggaggtggagtgcagaggagaggttcatatagcagtgacttacagaggcatccgccgg
agaggagagagcgaggcctgctggttcggaaggaacgatcagtcctggagtctggagtgc
tctcctaaaggttactctgtctggcacaatgagagagaaacagtcatctcctcctcctcc
ctcctcgaccatgtgtcctcctatatgctttctcccctcctcctctcctctgggagagta
gcagtgtatctggatcatcctgctggctctctctccttctacagagtctcctctgactcc
ctgacccacctccacaccttcagaaccacattcactgaacctctctatgctggcttcggg
tttcggtttgggttcttgtctttttctggtgcctcggtgtctctgtgtgctctgtag
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integrated database retrieval system
