Pseudochaenichthys georgianus (South Georgia icefish): 117444881
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Entry
117444881 CDS
T09629
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117444881
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117444881
04082 Neuroactive ligand signaling
117444881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117444881
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
117444881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
ANF_receptor
DUF6724
OATP
Motif
Other DBs
NCBI-GeneID:
117444881
NCBI-ProteinID:
XP_033936153
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MSSKYPDGLTGRIEFNDDGDRRFATYSIMNYQQKQGRIVQVGVFNGSQVVMNPQRKIIWP
GGETEKPVGYQMSTKLKIVTIHQEPFVYVKPTKTDGTCKEEFTLNGVLIKKVICTGPNGT
LPGQPIVPQCCYGFCVDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGE
LLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL
LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP
RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATV
KQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIVAVRDNKLHAFIWDSAVLEFEASQKC
DLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNA
PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQV
PLISLLHFLLHFLLHFLLHFLSPLPAPLPAPLPPPLPPPLPPLLPAPLPPPLLAPLPPPL
PAPPPAPLPSPLPAPLPPPLPSPLPPPLPPPLPAPPPAPLPSPLPPPLPAPLPAPLPFST
SCSTSCSTSCSTSSSTSFSTSSSTSSSTSCSTSCSTSFSTSSSTSCSTSCSTSFLHFLLH
FLLHFLLHFLLHFLSPLPPPLPAPLPAPLPPPLPAPLPAPALFRTL
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaagtatcccgacggtctgacgggacgcatcgagtttaacgacgacggcgac
cggcgcttcgcgacttatagcatcatgaactaccagcagaaacaagggcgcatcgtccag
gtcggggtcttcaacgggtcacaggtggtgatgaaccctcagaggaagatcatctggccc
ggaggagagacggagaaaccagttggatatcagatgtcgactaaactgaagatcgtgacc
atccatcaggagccctttgtttacgtgaagcctacgaagactgacgggacgtgtaaagag
gagttcacgctcaacggagtcctgatcaagaaggtgatctgcaccgggcccaacgggaca
ctcccaggtcagcccatcgtccctcaatgttgctatggtttctgtgtcgaccttctcatc
aagctggcaatgagcatgaacttcacctacgaggttcacctggtggctgatgggaagttc
ggcacgcaggagcgcgtgaacaacagcaacaagaaggagtggaatggcatgatgggggag
ctgctgggggggctggccgatatgatcgtggcccccctgaccatcaacaacgagagggcc
caatacattgagttctccaaacccttcaagtaccagggcctcaccatcctcgtcaaaaag
gagatcccacggagcactctggactccttcatgcagccattccagagcacactgtggctg
ttagtcggtctgtcggtccacgtggtggcagtgatgctttacctattagaccggttcagc
ccgtttggaaggtttaaagtgaacagtgaagaagaagaagaagacgccctcaccctgtcc
tccgccatgtggttctcatggggagtgctgttgaactctgggataggagaaggagctccc
aggagtttctcagcgaggattctgggtatggtgtgggcaggattcgctatgatcatcgta
gcatcgtatactgccaatctggcagccttccttgtgttggaccggcctgaggagcgcatc
actggcatcaacgaccccaggctgcgtaacccgtcggataagttcatctacgccacagtg
aagcagagctcggtggatatctacttcagacggcaggtggagctgagcaccatgtaccgc
cacatggagaagcacaactacgagagcgccgccgaggccatcgtggccgtcagagacaac
aagcttcatgccttcatctgggacagcgcggtgttggagttcgaagcgtcgcagaagtgc
gatctggtgacgacaggagagctcttcttccgctccggattcggcatcggaatgaggaaa
gacagtccctggaaacagaacgtttctctggctattctcagctctcacgagaacggcttc
atggaggatctggacaagacatgggtccgataccaggagtgtgactccaggagcaacgcc
cccgctaccctcacattcgagaacatggcaggtgtgttcatgctggttgccgggggcatc
gtcgccgggatcttcctcatcttcatcgagatcgcgtacaaacgacataaagacgctcgc
aggaaacagatgcagctcgccttcgctgccgtcaacgtctggaggaagaacttacaggta
cctttaatctctctgctccacttcctgctccacttcctcctccacttcctgctccacttc
ctttctccacttcctgctccacttcctgctccacttcctcctccacttcctcctccactt
cctcctctacttcctgctccacttcctcctccacttctggctccacttcctcctccactt
cctgctccacctcctgctccacttccttctccacttcctgctccacttcctcctccactt
ccttctccacttcctcctccacttcctcctccacttcctgctccacctcctgctccactt
ccttctccacttcctcctccacttcctgctccacttcctgctccacttcctttctccact
tcctgctccacttcctgctccacttcctgctccacttcctcctccacttccttctccact
tcctcctccacttcctcctccacttcctgctccacctcctgctccacttccttctccact
tcctcctccacttcctgctccacttcctgctccacttcctttctccacttcctgctccac
ttcctgctccacttcctgctccacttcctgctccacttcctttctccacttcctcctcca
cttcctgctccacttcctgctccacttcctcctccacttcctgctccacttcctgctcct
gccctcttccggacgctg
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