Pseudochaenichthys georgianus (South Georgia icefish): 117444892
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Entry
117444892 CDS
T09629
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117444892 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117444892 (cnga1b)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117444892 (cnga1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
NPR3
Presenilin
Sec62
EMC3_TMCO1
DUF5427
PFF1_TM
ALMT
Motif
Other DBs
NCBI-GeneID:
117444892
NCBI-ProteinID:
XP_071058908
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MAKVAPSVRSPNRSTSPTVALQDDPGEDMERDRTDQQAGPGVLFNANNSNNNEEEEKEKT
KKKKDKKERKEKKEKKEKERQERKERKENKLKEKEEKEKEKKEKEEKEKEKKAKDEAPKE
LTVIDPASNLYYHWLGLITIPVMYNWTLIIARACLEELQSDYLYFWFFVDFLCDLLYIAD
MIFRTRTGYLEQGLLVKDVPKLRERYLVSLQYKLDMVSMIPTDLLYFVFGLRYPEIRLNK
LLRFNRMLEFFQRTETRTNYPNALRIFNLVMYIVIIIHWNACLYYSFSKAIGFGADRFVY
PDTANPEFGRLIRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIFATIVG
NVGSMITNMNAARANFQARIDAIKQYMTFRKVTKDLEKRVIKWFDFLWTNKKAVDEREVL
KYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGR
EMYIIKEGKLAVVADDGIKQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLF
CLSKDDLMEALTEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKEMEEKVERMTTSL
DALQTRYARLLAEHEATQSKLKHRVHRLESKLVTTERTTEEEGAGTA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtagctccgtcagtccggtctccaaacaggtcgacatcgcccaccgtcgct
ctgcaggacgatccaggtgaagacatggagagggacagaaccgatcaacaagccggacca
ggagttctgtttaacgccaacaacagcaacaacaacgaagaagaagagaaggaaaagaca
aagaagaagaaagacaagaaggagaggaaggagaagaaggagaagaaggagaaggagagg
caggagagaaaggagaggaaggagaacaagctaaaggagaaagaggaaaaggagaaggag
aagaaggagaaagaggaaaaggagaaagagaagaaggccaaagacgaggctcctaaagag
ctcacagtcatcgacccggcgagtaacctctactaccactggctgggtctcatcaccatc
cctgtcatgtacaactggaccttgatcatagccagggcgtgcttagaggagctacagtct
gattatttgtatttttggttcttcgtggattttctatgcgacctcctgtacatcgctgac
atgatattcagaacaaggaccggttacctggagcagggtctgctggtgaaggacgttccg
aagttgcgtgagcgctacttggttagcttacagtacaaactggacatggtctccatgatc
cccaccgacctcctgtacttcgtctttggactgagataccctgagatacgcctcaacaag
ctgttacgattcaacaggatgctagagttcttccagaggacggagaccaggactaactac
ccaaacgctctccgaatcttcaacctcgtcatgtacatcgtcatcatcatccactggaac
gcctgcctctactactccttctccaaggctatcggtttcggggccgacagatttgtgtat
cccgacacggcaaatccagagtttggtcgtctgataaggaagtacgcatacagtatgtac
tggtccacactaacgctcaccaccataggagagaccccgccccctgtggagaactcagag
tactttttcgtcgtcactgacttcctggtgggtgtgttgatctttgccaccatcgtcggt
aacgttggttcgatgatcaccaacatgaacgctgccagagccaacttccaggctcgcatc
gacgcaatcaaacagtacatgaccttcagaaaggtaactaaggacctggagaagcgagtg
atcaaatggtttgatttcctgtggaccaataagaaagcagtggatgagagggaggtgttg
aagtacctgccagacaaactgagagctgaaatcgccatcaacgtccacctggacaccctg
aagaaggttcgtatctttgcggactgcgaggcaggtctgctggtggagctggtgctgaag
ctgcagcctcaggtctacagtcccggagattacatctgtaagaagggcgacatcggcagg
gagatgtacatcatcaaggaggggaagctggctgtggtcgctgacgacggcatcaagcag
tttgtggttctgagcgatgggagctacttcggagagatcagcatcctggctattaaaggc
agtaaggcaggaaatcgtaggacggcgaacatccggagcatcgggtactctgacctcttc
tgcctctccaaagacgacctgatggaggcgctaacagagtaccccgacgctaaagctcta
ctggaggagaagggacggcagatcctgatgaaggacgggctgctggacctggaggtggcg
gcacagggtccggatcccaaggagatggaggagaaggtggagaggatgacgacctcgctg
gacgccctgcagactcgatacgctcgactgttagccgaacacgaagccacgcagagcaaa
ctgaagcaccgagtccaccgcctggagagcaagctggtgacaaccgagagaaccacagaa
gaagaaggagctggaaccgcctaa
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integrated database retrieval system
