Pseudochaenichthys georgianus (South Georgia icefish): 117445058
Help
Entry
117445058 CDS
T09629
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117445058
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117445058
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117445058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_2
zf-RING_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
117445058
NCBI-ProteinID:
XP_033936344
LinkDB
All DBs
Position
4:9340136..9345536
Genome browser
AA seq
259 aa
AA seq
DB search
MSGSTMHPYHSSQSSLDRLSSEGPAGNGHLRSSRSLLSTPEQPALQLMCHHKESTQSCPS
ISRDSHCPVCLQTASFPVQTNCGHLFCAPCLIAYWRHGSWLDAISCPLCRQKVSVLCNLF
NESRSDSQSKEVLGEITDYNKRYSGAPRRVTDYLCDAPLLLQLLTRSLGTMGGLVWLFFF
RVALCCVGTVVSISYPPLDPVSSSSSANPLGTDPSLCGLLGVLDDLVVVILLLICVININ
QHMAPERGGQSATSSQGVM
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctcaaccatgcacccctaccacagctctcaatccagtctggaccgtctctcc
tctgaaggtccggcgggtaacggccacctccggtcatccagatctctgttgagcacacca
gagcagccagcgttacagttaatgtgccaccataaggaatctacacagtcatgcccatcc
attagcagagactcacattgtccagtgtgtttgcagacggccagtttcccagtccagaca
aactgcggccatttgttctgcgctccctgtctgatcgcttattggagacatgggtcctgg
ttggatgcaataagctgccctctctgcagacagaaggtcagcgtgctttgtaatctgttt
aacgagagtcgatcagacagtcagtcaaaggaagttcttggggaaatcacagactacaac
aaacgctattctggagccccaagaagggtcacagactacctgtgtgacgcgcctcttctc
ctgcaactgctgaccagaagcctgggcaccatgggaggactggtgtggttgtttttcttc
agggtggccctgtgctgtgtggggaccgtggtgtccatctcctaccctcctctggacccc
gtctcctcctcatcatcagccaatcccctgggaacagacccctccctgtgtggactgctg
ggggtcctcgatgacctggtggtggtcatcctgctgctgatctgcgttatcaacatcaac
cagcacatggcgccagagagaggaggacagtctgctacaagctcacaaggagtaatgtag
DBGET
integrated database retrieval system
