Pseudochaenichthys georgianus (South Georgia icefish): 117445062
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Entry
117445062 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-VIIb
KO
K21868
myosin VIIb
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117445062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117445062
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117445062
Membrane trafficking [BR:
pgeo04131
]
Others
Actin-binding proteins
Myosins
117445062
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117445062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
MyTH4
RA_2
FERM_C1_MyoVII
FERM_M
IRS
IQ
Myosin_VII_N
KRIT1_FRMD8_FERM_C
DdMyo7_FERM
SH3_1
SH3_9
FERM_N
SH3_2
nSTAND3
AAA_22
PID
ABC_tran
SNX17-27-31_F1_FERM
AAA_16
Motif
Other DBs
NCBI-GeneID:
117445062
NCBI-ProteinID:
XP_033936353
LinkDB
All DBs
Position
4:44017983..44057229
Genome browser
AA seq
2227 aa
AA seq
DB search
MLHLSKGDFVWVDSSIGVPIGAEVKVSDTGQLRLIDDEGKEHKVSKKTEGTVRPMHPTSV
KGVDDMIRLGDLHEAGLLRNLLVRHKEGTIYTYTGSILVAVNPYQLLPIYTAEQVHMYTD
RRLGELPPHVFAIADSCFFNMRRNKKNQCCVISGESGAGKTESTKLMLQFLAAVSGQHSW
IEQQILEANPILEAFGNAKTVRNDNSSRFGKYIDINFTEGGAIEGARVEQYLLEKSRVCR
QAPEERNYHIFYYMLMGMPAGQKKILSLGNAAEYNYLTMGKCTSCEGRDDMKEYAHFRSA
LKILMFTDNDSWEVSRLLAAILHLGNVDYEATMVNNLEGCDILQSSHFKMASQLLEVDPK
ALEKSLTQRSFMTAKESVTKPLASAQAVDCRDAFVKAIYGRLFLWVVGKINAAVYKPAED
SKEVRQSIGLLDIFGFENFAQNSFEQLCINFANEQLQQFFVTHVFKLEQDEYSRENIVWQ
HIQYQDNQSTLDVLANKSLNMMALIDEESNFPKGTDATLLQKMNQVHGKGLIYIPPKNNY
ETQFGIKHFAGEVFYDSKGFLEKNRDALSTDLIQLVETSTNKLLKQAFHDVLSSSTIKSS
VNPRMIITSASSSLRQASDGKKRVPTLTGQFRQSLDSLMKTLTVCQPYFIRCIKPNDFKR
PMLFDRELCMRQLRYSGMMETIRIRKAGYPVRYTFEEFFIRYRVLLRTSLCDPKQESKQK
CSESICESVLSGEGDWKTGKTKIFLKDFHDTMLELERMKELNEKALLIQKVLRGYRYRRE
YLRKKAAALVIQKHWRGHKGRKLYKVVQHGFARLQAQVRSRQLHFLYKKKREAAVVLQAR
VRGYLAKKEWKRKRDAVLLLQAHTRGGLARKAVRKMKTDRYLSAKEKEEERRVILGRQKH
LEEVLRRKKEMEAKAQNEAITDQEMVDSIFDFLPVVVGGQEGQAPVGFEKFELKKTITEE
IDIDDVPMEEDLPRGDDDDDDLDEYSFSKFASMYFQGAATHTHIRQRLLLPLLYHEDQGD
VLASMTVWWIILRFLGDLPEPKKQVRGSSTQERFMPLELISRKDRRLSHMVGLDQRVLRN
KNERTPTTLPEEPGQNRKGSMFIDLLTRNRKPSAVPAEAANPNVYTVPEGSPRTRKGSTF
TDLLTRNKKAATESAPPTSSLRKPSIIMEESDDLTEVSKPPTLQSVKEDGDLMEGEGATL
DRPLTSLEKLHIIVGYAIVRRDLRDEIYCQICKQLQDNNNRNSYFRGWILLSLCLGVFPP
SDRFIRYLQSFIRFAPGGYAPYCAERLRRTLLNGVRGEPPAWLELQATKTKKPMIVSVNL
MDGRSINLPVDSSSTSREICQLLSNKIKLKDTFGFSVYVALYEKVWALGSGREHVMDAIS
QCEQEVKRGGGQEQHAPWRLFFRKEVFTPWHDCKEDTISTELIYKQIIHGLKFGEYQSKK
EDDLVQLTAKHVYIQHGSESSAEHVKEAVQDCINSSLLEAKSEAKWVQMVSTAHAQGPYV
SSRQKADSVKAEMVDYAREKWPMFFSRFFEVVKLSGPALPKSKFIVAINWTGITFLDERE
KRLLELSFPEVTGVHSVREGKASSQAVSLLTLKGDFTLSGGMAEDMSELLTMFLSGLTSR
SRYAVTLKEADTQDDPMLLSFKKGELIIIIKDDEFAQERGWIKGQNESTKHTGAVPTGAI
IILPTLSKPTNQVMSLINLSPNQRKDIIQANQKETGTMERLAPTTLKDFSLEYFRQPTKD
VNRQVMSRNAAPERLWANSREPIRQPLLQKLVGNPELSHKACLAFTAILKYMGDYPTKQM
QSPLEHTDLIFSPATQNEALRDEIYCQIMKQMSSNNNRFSMEQGWQLLWLCCGMFPPSQA
LLRHTQRFLESRRREALAPDCLQRLQSSLRMEPRKLPPHQVEVDAIQQNSTQIFHKIHFP
NDTEEIFEVTTNTRIRDLIQRITKKLRLASADGFSIFVKTHDKVLSLNDTDYFFDSLRQI
TDWSKKAKTIKEGGLVNIPYLVFFMRKLWFNVIPGRDTEADVIFHFPQELPKYLRGYHVS
TKEEMLNVAALLFRIKFSNDKSQFVSIPKVLKELVPADQLKAMSENEWKKSIVAYFNKQV
GLTAEEAKVAFLKAVCRWPTFGCAFFDVKQTSEPSFPDIVRIAISKQGLTIIHPKTKDVL
ANHPLNRIANWCSGSTYFHMTIGSLVKGSKFLCETSLGYKMDDLITSYVNMYLQERKAGH
TRNQRFN
NT seq
6684 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatttgagtaagggtgattttgtgtgggtggactccagtatcggggtgccgatc
ggggcggaggtgaaggtgtccgacaccggacagctccggctgatcgatgatgagggaaag
gagcacaaggtgagcaagaagacggagggcaccgtgcggcccatgcaccccacctctgtg
aagggtgtggatgacatgataaggctgggggacctgcacgaggccgggctcctcaggaac
ctcctggtgcgacacaaagaaggcaccatctatacatacacaggctccattctggtggca
gtcaacccttaccagctgctgcccatctacaccgcggagcaagtgcacatgtacacagac
cgccggctgggtgaactgccaccacacgtcttcgccatcgcagacagctgcttcttcaac
atgcgccgcaacaagaagaaccagtgctgcgtcatcagtggagagtcaggagcagggaag
acggagagcaccaagctcatgctgcagttcctggctgcagtgagcggacagcactcctgg
atcgagcagcagatcctggaagccaaccccatcctggaggcctttggtaatgccaaaacc
gttcgtaacgataactccagtcgatttggaaagtacattgacatcaacttcactgagggg
ggggccattgaaggggcccgcgttgagcagtaccttctggagaagtcgcgagtttgtcgt
caggcgccggaggagaggaactaccacatcttttactacatgctgatgggaatgccagcc
gggcagaagaagattctttccctggggaacgctgcggagtacaactatctgaccatgggt
aaatgcaccagctgtgaaggacgtgatgacatgaaggaatatgcccacttccgctcagct
ctgaagatcctcatgttcacagacaatgactcctgggaagtctccaggctgctcgctgct
atccttcacctcggcaatgtggactacgaggccaccatggtaaataacctagagggctgt
gacatcctccaatcatcccatttcaaaatggccagccaacttttggaggtggatcccaaa
gcgctggagaagagtctgactcagcgctccttcatgacagccaaagagagtgtgaccaaa
cctctggcctcggcccaggcggtggactgcagggacgccttcgtcaaggctatttatgga
agacttttcctttgggttgtgggcaaaatcaacgctgccgtttacaagccagctgaggat
tccaaagaggtccgacagtcgataggccttctcgacatcttcggctttgagaacttcgcc
caaaacagctttgagcagctgtgcatcaactttgctaacgagcagttgcagcagttcttc
gtcacgcacgttttcaagctggagcaggacgagtattcccgtgaaaacattgtttggcag
cacatccaataccaagacaaccaaagcaccctggacgtgttggccaacaagtctctgaac
atgatggcgcttatcgatgaggagagtaacttccccaagggcacagatgccacactgctc
caaaagatgaatcaggtccatggtaaagggctcatctatattccccccaagaacaactat
gagacacagtttggaatcaagcattttgctggagaagtcttctatgattcaaaaggtttt
cttgagaaaaaccgcgacgccctcagcacagacctgatccagctggtggaaacctccacc
aacaaactcctcaaacaggcctttcacgatgtgctgtcttccagtaccatcaagagcagt
gtgaacccccggatgatcatcacctcggccagcagcagcctccggcaagcgagtgatggc
aagaagcgtgtgccgaccctgaccggccagttccgtcagtctctggattccctcatgaaa
acgctgactgtgtgccagccatatttcatacgctgcatcaaacccaacgacttcaagaga
cccatgctgttcgacagagagctgtgcatgcgccagctccgttactctggtatgatggag
accatccggatccggaaagctggatatcccgtacgatacacattcgaggagtttttcatt
cgctaccgtgtgcttctcagaacttccctctgtgatcccaaacaagaaagtaaacagaaa
tgctctgaaagcatttgtgaatctgtgctgagtggagagggcgactggaagactggcaag
accaagatattcctcaaggacttccatgacactatgctggaactggagcggatgaaagaa
cttaatgagaaagcacttctgatccagaaagtcctgagaggatacagatacaggagggag
tacctgaggaaaaaggcagctgctcttgtcattcagaagcactggagaggacacaaaggc
cgcaagctgtacaaagtggtccagcacggctttgccaggctgcaggctcaggtccgatcc
cgccaacttcacttcctgtacaagaagaagcgcgaggcggccgtcgtgctgcaggcccga
gtcagaggatacctggccaagaaggaatggaagcgcaagagagacgctgtgctcctcctg
caggcccacaccaggggggggctggccagaaaagcagtccgaaagatgaaaacagatagg
tacctctctgccaaagagaaagaagaagaacggcgagtcattctggggagacagaaacat
ctggaggaagtgctcaggcggaagaaggagatggaggccaaagctcagaatgaggccatc
acagaccaggagatggtggacagcatttttgacttcctgcctgtcgtggttggagggcag
gaggggcaagcccctgtaggatttgagaaatttgagctgaaaaagacaattactgaggag
atagacatcgacgacgtccccatggaggaagatcttcccagaggcgacgatgatgacgac
gacctggatgagtactccttctccaaatttgcctctatgtacttccagggtgcagccacc
cacacccacatccgccagaggctgctgctgcccctgctctaccacgaagatcaaggagat
gtcctggcgtccatgaccgtgtggtggatcatcctgaggtttttgggagacctccctgag
cccaagaagcaggttcgaggaagctctacgcaggagcgcttcatgccgctggagctcatc
tccagaaaggaccgacgcctcagccacatggtcggcctggatcagagggtgctgaggaat
aaaaatgaaaggacgcctaccacattacccgaggaaccaggacagaacaggaagggctcc
atgttcatagacctgctgaccaggaacaggaagccttctgctgtgcctgcagaggcagca
aaccccaatgtgtacactgtgccagaggggagccctcgaaccaggaagggttccacattc
actgacctactgaccagaaacaaaaaagctgctacagaaagtgcaccccccacctcaagc
ctcaggaaaccttccatcatcatggaggagtccgacgatctgacggaagtgtccaagccg
cccaccctgcagagtgtgaaggaggacggggacctcatggagggggagggggccaccctg
gaccggccgctgacctcactggaaaaactccacatcatcgtgggatatgccatcgtcaga
cgtgaccttagggatgagatttactgtcagatctgcaagcagcttcaagacaacaacaat
cgcaacagctacttccgcggctggatcctgctgtccctctgcctgggagtcttccccccc
agtgatcgcttcattaggtatctgcagagcttcatccggttcgctccaggaggctacgcc
ccgtactgtgcggagaggctgcggcgcaccttgctgaacggagtgcggggggaacctccc
gcctggctggagctgcaggccaccaagacgaagaagcccatgatcgtgtcggtgaacctg
atggacggacgctccatcaacctgccggtggactcctcctccacctccagagagatctgc
caactgctctccaacaaaatcaaactcaaagacacatttggcttttctgtctacgtggcc
ttgtatgaaaaggtgtgggctctgggcagcggccgggagcacgtgatggacgccatctcc
cagtgtgagcaggaagtgaagagggggggggggcaggagcagcacgctccctggcggctc
ttcttccgcaaggaggttttcaccccctggcacgactgcaaggaggacacgatcagcaca
gagctcatctacaaacagatcatccacggcctcaagttcggagagtaccagagtaaaaag
gaggatgatttggttcagctcactgcgaaacatgtgtacatccagcatggctctgagagc
agtgcagaacatgtgaaggaagctgtgcaggactgcatcaacagctctctgctggaggcc
aagtccgaggccaagtgggtgcagatggtcagcactgctcacgctcagggtccttatgtg
agttcaagacagaaggcggactctgtgaaggcggagatggtggactacgcccgggagaag
tggcccatgttcttctcccgcttcttcgaagttgtcaagctgtcaggtcctgcgctgccg
aagagcaagttcattgtggccataaactggactggtatcaccttcctggacgagagagag
aagaggctgctggagctctccttccccgaagtcaccggagtccacagcgtgagggagggt
aaagcgtccagccaggccgtgagtctgctgactctgaaaggagacttcaccctgagcgga
ggcatggccgaggacatgtccgagctgctcaccatgttcctgagcggcctgacctcgagg
tctcggtacgctgtgaccctgaaggaagctgacacgcaagacgaccccatgttactgagc
ttcaagaaaggagagctcattatcataatcaaagacgacgagtttgcccaggaacgtggc
tggataaagggccagaatgagagcacaaaacataccggcgccgtccccaccggggccatc
ataatcctgccaacgctcagcaaacccaccaatcaggtcatgagcctcatcaacctgtct
ccaaaccaaaggaaagacataatacaggcaaaccagaaggaaacaggaaccatggagaga
ttagctcccaccacgctgaaagacttctccctggagtacttcaggcagcccactaaggat
gtgaaccgtcaggtgatgtccaggaacgctgctcctgagaggctgtgggccaactcgagg
gagccaatcagacagcccctcctccagaagctggtgggcaacccggagctcagccacaaa
gcctgcctggccttcactgcgatcctgaaatatatgggagattatcccaccaagcagatg
cagagtcccctggagcacacagacctgatcttcagccccgccactcagaacgaggccctg
agggacgagatctactgccagatcatgaagcagatgagcagcaacaacaaccggttcagc
atggagcagggctggcagctgctgtggctctgctgcgggatgttccccccctcccaggcc
cttctgaggcacactcagaggttcctggagtcgcggcgcagagaggccctggcccccgac
tgcctgcagcggctgcagagctccctcaggatggagccgaggaagctcccaccacaccag
gtggaggtagacgccatccaacaaaacagcactcagatcttccacaagatccacttcccc
aacgacacagaggagatatttgaggttaccaccaacaccaggatcagggatctgatccag
agaatcaccaagaagctcaggctggcttctgcggacggcttcagcatctttgtcaaaaca
catgacaaggttctcagtttgaatgacacggactacttctttgacagtctgagacaaatc
actgactggtccaagaaagccaagacgatcaaagagggtgggcttgtcaacataccctac
cttgtgttcttcatgaggaagttgtggtttaatgtaatccctggcagagacacagaggct
gatgttatcttccatttccctcaggagctaccaaagtacctgagaggttaccatgtcagc
accaaggaggaaatgctcaacgttgccgctctgctcttcaggataaagttcagcaacgac
aagagccagtttgtctccatcccaaaggtcctgaaggagctggtccctgcagaccagctg
aaggccatgtccgaaaatgagtggaagaagagtattgtcgcatattttaacaaacaagtg
ggtttgactgctgaagaagcgaaggtggcgttcctgaaggcggtctgccgctggcccacc
ttcggctgtgccttctttgatgtgaagcaaacatctgaaccaagcttcccagacattgtg
cgaatagccatcagcaagcagggactcaccatcatccaccctaaaaccaaggatgtactg
gctaatcacccattgaaccgcatcgctaactggtgcagtggaagcacctactttcacatg
actattggcagcttagtcaaggggagcaaattcctgtgtgaaacttcactgggttacaag
atggatgatcttataacctcctacgtaaacatgtacctccaagagaggaaggcggggcat
accaggaaccagcgcttcaactga
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integrated database retrieval system
