Pseudochaenichthys georgianus (South Georgia icefish): 117445104
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Entry
117445104 CDS
T09629
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00310
Lysine degradation
pgeo00514
Other types of O-glycan biosynthesis
pgeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117445104 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117445104 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgeo01003
]
117445104 (colgalt2b)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117445104 (colgalt2b)
Glycosyltransferases [BR:
pgeo01003
]
O-Glycan biosynthesis
O-linked Gal type
117445104 (colgalt2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117445104
NCBI-ProteinID:
XP_033936409
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Position
4:complement(6339941..6376245)
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AA seq
615 aa
AA seq
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MRAVVAGGVAVLCALLVAVLPGCVSELMTVVQEPLRAESSLLKPKVMIAIVARNAAHSLP
HYLGCIERLEYPKERIAIWAATDHNVDNTTSMLKEWLKRAQGVYHYVEWRPMDEPKSYTD
EWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFVDSDNLLTNPHVLNLMMAEKLTLA
APMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCYAVPMVHSTFLIDLRRESSK
DLTFYPPHPDYSWAFDDIMVFAFSARQSGVQMYVCNREHYGLLPVPLKAQQSVEDESESF
IHTITEALIDHDIEPSEHLHSQPSPQDTMGFDKIILVNLKRRLDRRTRMLKTMSSLGLHT
VLEEAVDGKALNSSQLQALGIEMMPGYKDPYSGRVLTRGEIGCFLSHYSIWKQVVENGIP
KVLVLEDDVRFEPRFKRRIQSIMDDVVKTQLDWDLIYVGRKRMQVQQPEQSVDGVNNLVK
ADYSYWTLGYALSLQGAKKLLDAKPLSKMLPVDEYLPVMFNKHPNTAFMTHFEPRDLKAF
SVEPLLIYPTHYTGEPGYFSDTETSTIWDDEAVETDWDRQHALKTAQQGSIEAMAQNSVS
GDMPPPAARASRDEL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggtcgtggccgggggagtcgctgtgctgtgcgcgctgctggtcgcggtgctg
cccggctgtgtgtccgagctgatgacggtggtgcaggagccgctcagagccgagtcttcc
ctgctgaagccaaaggttatgatcgccattgtggctcgcaacgcggcgcacagcctgcca
cattacctgggctgcatcgagaggctggagtacccgaaggagcgcatagcgatctgggca
gcaacagaccataatgtggacaacactacttcaatgttgaaagaatggctgaagagagcc
cagggtgtctatcactacgtggagtggcgaccgatggacgagccgaaatcatacacagat
gagtggggtccgaagcattggcctccgtcacggttcaaccatgtgatgaagctgaggcag
gcggcgctgaaggctgccagggaacgatgggctgactacatactctttgtagacagtgac
aacctgctgacaaacccccatgtgctgaacctgatgatggctgaaaagctgacgctggct
gcccccatgttagagtctcgctcgctctactccaacttctggtgcggcatcaccccacag
ggatactacaagcggaccccggactaccagcctatcagggagtggaagcgtctcggctgc
tacgctgttcccatggtgcacagcaccttcctaatagacctgcgtcgtgagtccagcaag
gatctgactttctaccccccccaccccgactacagctgggcgtttgatgacatcatggtg
tttgctttctctgctcgtcaatcaggcgtgcagatgtatgtgtgtaacagagaacactac
ggcctgctgcccgtccctctcaaagcacagcagagtgtggaggatgagagcgagagtttc
atacacaccatcacggaggctttgattgaccacgacattgagccctctgagcacctgcac
tctcagccgtcgccacaggacaccatgggctttgataaaattatcctggttaacctgaag
cgccggctggacagacgaaccaggatgttgaaaacaatgtcttcgctgggtttacacacc
gtgctggaagaagcagtggacggcaaggctctcaattcatcccagcttcaggcgctagga
atagagatgatgccgggatacaaagacccttactctggtcgagtcctgaccagaggggag
atcgggtgcttcctcagccattactctatatggaagcaggtggtggagaatggcatccca
aaagttcttgttttagaggacgatgtgaggtttgaacctagatttaaacgacgaatccag
tccatcatggatgatgtagtcaaaacccagctggactgggacctcatctacgtgggccgt
aagcgtatgcaggtgcagcagccggagcagtctgtggacggcgtgaacaacctggtgaag
gccgactactcctattggacgctcggctacgcgctctcactgcaaggagccaagaagtta
ctggatgcgaaacccttgtcgaagatgctgcctgtcgacgagtacctccctgtcatgttc
aacaaacaccccaacactgcgttcatgactcacttcgagcctcgggacctgaaggccttc
tccgttgagccgttgctcatctaccccacgcactacaccggagagccgggctacttcagc
gacacggagacctccaccatctgggacgacgaggcagtggaaacagactgggaccggcag
cacgccctcaagacggcccagcagggcagcatcgaggccatggctcagaacagcgtcagc
ggagacatgcccccccccgcagcccgagcatcccgagacgaactctga
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