Pseudochaenichthys georgianus (South Georgia icefish): 117445120
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Entry
117445120 CDS
T09629
Symbol
sox14
Name
(RefSeq) transcription factor Sox-14
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117445120 (sox14)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117445120 (sox14)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117445120
NCBI-ProteinID:
XP_033936430
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All DBs
Position
4:complement(42879324..42881305)
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AA seq
236 aa
AA seq
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MSKPADHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDE
AKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDHLKGLPMSAESLLCHSE
KARAFLPPTSPYSFLDPSQFTSSALQKMTEMPHGLSASSLPYASSLGYQNGAFGTLGCPS
QHTHTHPSPTNPGYVVPCNCTAWSTSSLQPPVAYILFPGMTKTGLDPYSSAHATAM
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcctgctgaccacatcaagagacccatgaacgcgttcatggtttggtcccgg
ggccagaggagaaaaatggcccaggagaaccccaaaatgcacaactctgagatcagcaag
agactgggcgccgagtggaagctgctgtccgagtccgagaagagaccgtacatcgacgag
gctaagcggctgcgcgcccagcacatgaaggagcaccccgactacaagtaccggccccgg
cgcaaacccaagaacctgctgaagaaggacaggtacgttttcccgctgccttacctcggg
gacaccgatcacttgaagggactcccgatgtccgccgagtccctgctgtgccactcggag
aaagcccgagccttcctgccgccgacctccccgtactccttcctcgacccgagccaattc
acctccagcgccctccagaagatgacggagatgccccacgggctgagcgctagctctttg
ccgtacgcttcctctttgggataccagaacggcgcgttcggcacccttgggtgtcccagc
cagcacacccacacccacccatcgcccactaacccgggctacgtggtcccgtgtaactgc
actgcctggtccacgtccagtttacagcccccggtggcctacatactttttccaggtatg
accaagactgggctagacccatattcatccgcacacgccactgccatgtaa
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