Pseudochaenichthys georgianus (South Georgia icefish): 117445250
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Entry
117445250 CDS
T09629
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117445250 (syde2)
Membrane trafficking [BR:
pgeo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117445250 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
117445250
NCBI-ProteinID:
XP_033936655
LinkDB
All DBs
Position
4:24112720..24160740
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AA seq
1469 aa
AA seq
DB search
MADTEVAVNEHNANWSYDNSQTLGTDLPVCAALDYTHCMSRSTEENIVIRNIESYGPEYA
GDMRGTAGSLQSPTFFPTELNICDINMASMCATETSLRYPLDSEDDDYYDNEILPFYATI
RAKSDGDKAEVTELSGQVKGQLDDSNSAQETDRLRNQLKEAYYLLINAMNDINLDVQQIN
VGLIEQQATSSCSSHSRDSLCSRLSAKNMDSDSWSSGGDHSPQQVSDADSLLLCLSGNFE
SGLKARLNSKSMVNLSLTKIRPMLLRSVSDGGIRCGQPSLCVKAQTSSGDKGATETKEAE
GVRATGVGELSKPQVLHNAVSIDELQEAGGDDESSGSVNSLTGSSDSNTEASTNQGDNNK
QEPTDARVQRANSVNKGHGVTVNKMQEWMHKGRLLSSEMKQRIEGSSLPCSGGQSQDRPC
SLGNRGVTPVKVKSPRQHQPAFIENVQTPCANGREVGRANESSSWRPPLTTITVSKKRNW
LQQSSLGKNQCTKDELQGMQGAEEEGPNQLPPPPSPSPDHLRPSGAAPSRPARLHLPQTS
VGEAKVSPHPRSIDPAEENDADDEGEIWYNPIPEDDEVETSQRSAVRLLVPPRAEPQRRP
SRAGDVGQGGRNLGGGSGAGPEALGESLGGASGDGVQGNAVHSTEALHLHRQMLACKPQE
EGGPSTSRTTDGPDLPNAVSSPPSSPNPAKKSSSINWSFPDKIKSPRTVRKISMKMKKLP
ELSRKLSIKGTSSSSNINNGNGSSHLEPRAHSPRNNVSGSEAVPLSSGPPRLATSGGGQA
SRNVISRYHLDSSVSTQHSFSKKKSNGSSKSASKGGYLSDGDSPELVAKSGKHGSAEGKG
GKGKETEVGGGSSKLNGTELDIDAFRHYSFTEQPKCSQYISGLMSLHFYGAEDLKPPRID
SRDVYCAIQVDSVNKARTALLTCRTTFLDMDHTFNIELENAQHLKLVVFSWEPMPRRNRV
CCHGTVVLPALFRVTRSHQLAVKLEPRGLIYVKLNLMDQWKNSLDGGPHRDREPQMFGVE
AWRVVERENTGLMVPLLISMCINEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSYAVE
LCENTYPDVNVITGVLKDYLRELPYPLITKHLYEAVMEAMAMRPLRIGPSGCENDAGDTE
HTVSLLENLPDVERVTLQKLLDHLKLVASCQEVNKMTCQNLAVCFGPVLLSQRQEASCHT
NRVFIDSEELASALHFKKHIEVLHYLLQLWPVVDPTGRSSSQPPAASVVLTSSDLLSAPP
IRRRKERPQVLNLSEAEMAGVLRPKPGRLDSPSNRYAGDWSRCGESYFPCETLLPPNREE
SDYDDVPSEDTEAAEEEQENPEEDPEEDKEQMVTCPESDSAEQEQPQREQEVKEDRENEK
EEEETQEESDSSGNVQTLEDNEEEEERVCNHILPPLLPKEHTYQAYMKIQDISPVLSNRV
NLKDLQESIDTLIGNLERELNKNKLNVGY
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggcagacactgaagtcgctgttaatgaacacaacgcaaactggagttatgacaacagc
caaactttggggacagacttgccagtttgcgcagcacttgactatacacactgtatgtca
aggagcacagaagaaaacattgtaatcagaaatatagagagttatgggccggagtatgca
ggggacatgcgagggactgcaggcagtctgcagagcccgacgtttttccccacagagtta
aacatatgcgacattaacatggcatccatgtgcgccacagagacgtcactaagataccct
ttagatagtgaagatgatgattattatgataatgaaattctgcctttttatgcaacgatc
agagcaaaaagtgatggtgacaaagcagaggttacagagttgtctggtcaggttaaagga
cagctggatgacagtaacagtgcacaggaaactgacaggcttagaaaccagctgaaagaa
gcgtattaccttctaataaatgctatgaacgatatcaacctggatgtccagcagattaat
gttggtttaattgagcagcaggccacctcttcatgtagtagccactccagggatagcctg
tgctcgaggttgtccgccaaaaacatggacagcgactcctggtcatcgggaggcgaccac
agcccacagcaggtgtctgacgctgactcactcctgctttgcctcagtgggaactttgag
tcaggcctcaaagccaggctgaacagtaagagtatggtaaacctgtccctgactaagata
agacccatgttactgcgctctgttagtgatggagggatcaggtgtggtcaaccatcactc
tgtgttaaagcccagacatccagtggggataaaggggccacagagacaaaagaggctgaa
ggggttagagcaactggagtaggtgagctctccaaacctcaggtgcttcacaacgccgtc
agcattgatgagttacaagaagctggcggtgatgacgagagcagcggctcagtcaacagc
ctcacgggttcttcagacagcaacaccgaagcatcaacaaatcagggtgacaacaacaag
caggagccgactgatgcccgagtacagagagccaactctgtcaacaagggccacggtgtc
actgtcaacaagatgcaggagtggatgcacaagggccgtttgctgtcctctgagatgaag
caacgcattgagggctcatctttgccgtgcagcggaggacaaagccaggaccgaccctgc
tctcttggtaaccgaggggttacacctgtcaaggtcaagtctccacgccagcatcagcca
gctttcattgagaatgtccaaaccccctgtgctaatggccgggaggtgggcagggccaat
gagtcatcatcatggcggccaccactcaccacaattaccgtctccaagaaacgcaactgg
ctgcagcaaagctcccttgggaagaatcagtgcaccaaggacgagctgcaaggaatgcag
ggggctgaagaggagggccccaatcagctgccacctccccccagtccctctcctgaccac
ctgagaccctcaggggcagctccatcacggccggcccgcctacacctgcctcagacaagt
gttggtgaggccaaggtgtcccctcatcctcgaagcattgacccggctgaggagaatgac
gcagacgatgaaggcgagatctggtacaacccaatccctgaggacgatgaagttgagacg
tctcagcgatccgccgtccgtctgctggttccccccagagctgagccccagaggaggccc
agcagggcgggggacgtgggtcagggcggcaggaaccttgggggcggcagtggcgccggg
ccggaggcgctcggggaaagcctcggtggcgcttcaggagacggtgttcaggggaatgct
gtacattccacagaggcactacatctgcacagacagatgctcgcgtgcaaacctcaggag
gagggggggccttccaccagcagaaccacagatggtcctgacctgcccaatgcagtcagc
tcccctccctccagcccgaacccggccaagaagagcagctccatcaactggtccttccca
gacaagattaagtctccgcgcaccgtgaggaagatctccatgaagatgaagaagcttcca
gagcttagtcgaaaactcagcatcaaggggacctcaagcagcagtaacatcaacaacggc
aatggaagcagtcatttagagcccagagcccattcaccccggaacaatgtgagcgggtcg
gaggccgtccccctttcctcgggccctcccaggttagctacatctgggggagggcaggcc
agtcgtaacgttatctcccgctaccacctggacagcagtgtgtccacgcagcacagcttc
agcaagaagaaaagtaacggcagctcaaagtccgccagtaaaggtggttacctcagtgat
ggcgactcacctgagctggtggcaaaatctgggaagcacggctcggcggaggggaagggc
gggaaaggcaaggagacggaggtaggaggtggaagctccaaacttaatggcacagaattg
gacattgatgctttccgccattacagcttcacagagcaacccaagtgcagccagtacatc
tccggactgatgagcctgcacttctacggtgctgaggacctcaaacctccgcgcattgac
tctagagatgtgtattgcgccatccaagtggactcagttaacaaagcacgcaccgctctt
ctcacatgccgaactaccttcctagatatggaccacaccttcaacatcgagctggagaac
gcccagcacctgaagttggtggtgttcagctgggagccgatgccgaggcgaaaccgcgtc
tgttgccacggcacggtggttctgccggcacttttccgggtaacgcggagccaccagctg
gctgtgaagctggagccgcgggggctgatctacgtcaagctgaacctgatggaccagtgg
aagaactcgctggatggcgggccacacagagacagagagccccagatgttcggtgtggag
gcgtggcgggtggtggagagggagaacacaggactgatggtgccgctgctcataagcatg
tgcatcaatgagatcgagaaaagaggctgccaggtagtgggcctgtaccgtctttgtgga
tctgcagccgtgaagaaggagctgcgcgaggcatttgagagagacagctacgccgtggag
ctgtgtgaaaacacgtatcccgacgttaacgtcattacaggagtactgaaggattacctg
cgagagctgccataccctctgatcaccaagcacctgtatgaggcagtgatggaagccatg
gcaatgaggcctctgcggataggaccatcgggctgcgagaatgacgcgggcgacacagaa
cataccgtcagcctgctggaaaacctgccagacgtggagagggtgacactgcagaagctt
cttgaccatcttaagttggtagcgtcctgccaggaagtgaacaagatgacgtgtcagaac
ctggcggtgtgtttcggcccggtgctgctcagccagcgtcaggaggcgtcctgccacacc
aaccgagtgttcatcgactccgaggagctcgccagcgcgcttcacttcaaaaaacacatc
gaagtcctgcattacctgctgcagctctggcctgttgtggacccaactggccgatcttcc
tctcagccccctgcagcctctgtggttctgacctcatccgacctgctgtcagcgcctccc
atcaggcggagaaaagagcgtccccaggtcctgaatctctctgaagcggagatggcgggc
gttctgcggcccaaaccggggcgcctggacagccctagcaaccgctacgccggcgactgg
agccgctgtggcgagagctacttcccctgtgaaactctgctgcctcccaacagagaagag
tcggactatgatgacgtgccctcagaggatacagaggcagctgaggaggagcaggagaat
cctgaagaagacccagaggaagataaagagcagatggttacctgccctgagtctgattct
gcagagcaggagcaacctcagagagaacaagaggtgaaggaggacagggaaaatgagaaa
gaggaggaggagacgcaagaagagagtgacagttcaggcaatgtgcaaactttagaggac
aatgaggaggaggaggagagggtgtgcaaccacatccttccccctctcctgcccaaagag
cacacctatcaggcctacatgaagatccaggacatcagccctgtgctgagcaacagagtc
aacctgaaggacctgcaggagagcatcgacactctgataggaaacctggagagagagctc
aacaagaacaagctcaatgtcgggtactga
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integrated database retrieval system
