KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117445299
Entry
117445299         CDS       T09629                                 
Symbol
tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
  KO
K18341  TBC1 domain family member 1
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pgeo04131]
    117445299 (tbc1d1)
Membrane trafficking [BR:pgeo04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    117445299 (tbc1d1)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    117445299 (tbc1d1)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab associated proteins
    117445299 (tbc1d1)
SSDB
Motif
Pfam: RabGAP-TBC RabGap-TBC_2 DUF3350 PID DUF2594 Trimer_CC
Other DBs
NCBI-GeneID: 117445299
NCBI-ProteinID: XP_033936746
LinkDB
Position
1:complement(26465862..26513121)
AA seq 1404 aa
MEGLYFEVKPRRDEPSSPLSSENPPPNLTSNHRSCPSLLHRNSSTLCPRKLSSTRKRISP
QGEKVEEEGEEEDEEIRYKLILIGSLPVHHLTTMAMLPWVVAEISKCRPAERNVGAGLRS
GRQVDPSTRNQTVFLCVSALRVRCVSVLGMGVVWDPLTHTVLFECRPHQVTKLIHNSQEP
SSFGCLVRDAPNYSCYVFQCQDSTKVPEIISTLRQAGKSSARSDDIAPISNKSSSGGSDS
SETSFSSVSTTTTSVATSAALSPTAFSKKFEVLFCGRVSVAHKKAPPALIDECIEKFSQL
QGSGREEDKGGNSGALGGLRKALSFQSNGLGSNDVDNGAAGSPTAGKRPVLFKRDPSFPC
LQALDENGLSPEISHTNTSDTHTHSAGVQCLSLQENRTMLFTVGRSQIFLVSPDTKKVAI
EKSFKEISFCSQGICHVDHFGFICRETVEGGSCHFVCYIFQCTDETLVDEIMLTLKQAFS
VAALQQNAKTQGQQCDSCPMQQLHRLCERIEGLSPSKTKLELQRHLATLDNEEQASVFEN
TMRARPKSDQEENEMVMASLRNLYEEKQKSHQHLLPGDRRVSEEAAPAPVEAQQSSSRQR
LEQFKSRAKRSLTESLEGIWKGSSKAKAQRDNSLESDSGSSICTVNSSQDQACLDDPLPA
SSQLRPTSPLKCHNSTGDLNLLDSSPTLSPSSSSLPGEAQPQGFRRRASTFSHPPTPSSA
EYSPVFTPTNSPQNPTAATKPKLVRHYSVSTDTPHQSKHVPADSTLPPVPPCPSSHSPLL
PHHPSSPSAGARLNTRRPLGGLRARLRSSSSVPNFLKFPFLASLQENDFPEPKSRDVAAL
SIPNEACGMWESPQRGHRHSWRQQIFLRVATPQKNTESNELGESCLEGGRVCMGQGVGGN
GDLIMRLVPEERTKKSKEDLRELWRKAILQQILLQRMERENQKLQATESDLQNKRLKLDY
EEITPCLKDVTLVWEKMLGTPGRAKVKFDSDTIHAAVAQGVPRQHRGEIWKFLSEQYLLR
QTVPSRPPANHTPYKELLKQLTTQQHAILIDLGRTFPTHPYFQAQLGAGQLSLYNLLKAY
SLLDPEVGYCQGLSFIAGVLLLHLGEEDAFYMLKFLMYDVGLRKQYRPDMIILQIQMYQL
SRLLHDYHRDLYSHLEQQEIGPSLYATPWFLTAFASHFPLGFVARVFDMLFLQGSEVIFK
VAMSLLGSHKPLILQHESLESIVDFIKTTLPNLGLVQMEKTINQVCQMDVSKQLQAYEVE
YHVLQDELLDTPPSLNQHQRTAQLERTNQSLRQQNLDLREELQVSQARVCSLQGRVEALS
QSEVLLTEHVSALEEEKKQLVSTVQLLQDILTSLGTHSTPDGQTLPPPSERHTVTATEKV
EEKERGANRTVDSPPHPLVLPEGS
NT seq 4215 nt   +upstreamnt  +downstreamnt
atggaggggctctactttgaagtgaagcccagaagagatgaaccctctagccctctaagc
tctgaaaacccccctcctaacctgacctcaaaccaccgctcatgtccatcacttttacat
cgcaactcttccacactgtgtccgcgcaagctctcttctacaagaaaaaggatttcacca
cagggggaaaaggtagaggaagaaggagaggaggaagatgaggagatacgatacaaactg
attttgatcggttctctgccggtccaccacctgaccaccatggccatgctgccctgggtg
gtggctgagatcagcaagtgtcggcctgcagagaggaatgtgggtgctgggttgcggtct
ggacgacaggtggacccttctacccgtaatcagacagttttcctgtgtgtgtcagcattg
cgggtgcgatgtgtgtctgttctgggaatgggagttgtctgggaccctctgactcacacg
gtgctgtttgaatgtcgtcctcaccaagtgaccaaactgattcacaacagccaggagccc
agcagcttcggctgcctggtccgagacgcaccaaactactcctgctatgtcttccagtgc
caggacagcaccaaggttcctgagatcatcagtacgctgaggcaggctggcaagagctcg
gcccgcagcgatgacatcgctcccatctccaacaaatcttcctctggaggcagcgattcc
tctgaaactagtttttcttcagtctccacaacgacaacctccgtggcaacctctgctgct
ttgtctccgacagccttctccaagaagtttgaggtgctgttttgcggccgtgttagtgtt
gctcacaagaaagccccccccgccctgatagatgagtgcatcgagaagttcagccagttg
caaggctcagggagggaggaggataaaggaggaaacagtggggcattgggtgggctgagg
aaggctctatcctttcagtccaatggacttgggagtaacgatgttgataatggagctgca
gggagccccaccgcagggaagcgtcctgtgctgttcaaaagagaccccagcttcccctgc
ctgcaggccctggatgagaacggactctcacctgagatctctcacaccaacacctctgac
acacacacacactctgctggagtacagtgtcttagcctgcaggagaacaggaccatgctg
tttacggtgggcaggtctcagatcttcttggttagtccggacaccaagaaagttgccata
gaaaagagtttcaaagagatctccttctgctcacagggtatttgtcacgtggatcacttt
ggcttcatttgcagggagacagtggaaggagggagctgccactttgtgtgctacatcttc
cagtgcaccgacgaaacactggtggacgagatcatgctgactttgaagcaggcgttctct
gtggcagccctgcagcagaatgcaaagacccagggtcagcagtgcgacagctgtcccatg
cagcagctccaccgactgtgtgagaggatagaaggtctttccccgtctaaaaccaagctg
gagcttcagagacacctcgccactctggacaatgaggagcaagcatcagtctttgaaaac
accatgagggctcgtcctaaaagtgatcaggaagagaacgagatggtgatggcctctttg
aggaatctttatgaggagaagcagaagagccatcagcacctcctgcctggagacagacgg
gtcagtgaggaggcagctcccgccccagtggaggcgcagcagagcagcagtcggcagaga
cttgaacagttcaagagcagagccaagcgctctctcaccgagtctctggagggcatctgg
aaggggagcagcaaggccaaagctcagagagacaacagtttagaaagtgacagcggctcc
tccatctgcacagtgaacagcagccaggaccaggcgtgtctagatgaccccttacctgct
tcctcccagctgagacccaccagcccactcaagtgccacaactcaacaggagacctgaac
ctcctggactcctctcccaccctgtcgccctcctcctcctctctacccggtgaagctcag
cctcagggcttccgccgacgggccagcaccttcagccacccccccaccccttcatcagca
gagtactcaccagtgttcacaccaactaactcaccacagaaccccaccgctgctaccaag
cccaagctcgtacgacactactccgtcagcaccgacactccacaccagagcaaacatgtc
ccagcggactccacccttcctcctgttcccccctgcccttcatctcactctcctctcctt
cctcatcatccttcctcaccttctgctggagctcgtctcaatacaagacgtcctctgggt
ggtctgcgtgctcgtctccgctcctcctcctctgtccctaattttctgaaatttccattt
ctggcctctctccaagagaacgattttcctgagccaaagagcagagatgtagcagctctg
tctatacctaatgaagcatgtgggatgtgggaaagtcctcagcgaggccatcggcactcc
tggaggcagcagatcttcctccgggtcgcgacacctcagaaaaacacagaatcaaacgag
ctgggggaatcctgcctagaggggggtcgagtgtgcatgggacagggagttggaggaaat
ggggacttgatcatgaggctggtgccggaggagaggacaaaaaagagcaaagaggacctg
agggagctctggaggaaggccatcctgcagcagatcctgctccagaggatggagagggag
aaccagaagctgcaggccacagagagcgatctgcagaacaagcgtctgaagctggactac
gaggaaatcactccgtgcctgaaggacgtcacgctggtgtgggagaagatgctcggaact
cctgggagggcaaaggtcaaatttgactcagacaccatacatgctgctgttgcacaaggt
gtccccaggcaacatcgaggcgagatttggaagtttctgtccgaacaatacctgctcagg
cagacggtcccgtcccgaccacctgccaaccacacgccatacaaagagctgctgaaacag
ctcaccacgcagcaacacgccatcctcatagacctgggtcgcacttttcccacacatcct
tatttccaagcccagctgggagcaggacagctgtctctgtataatttactgaaagcctac
tcgctgctggaccctgaggtgggttactgccagggcctgtccttcattgcgggggtgctg
ctgctacacttgggggaagaggacgccttctacatgcttaagtttctcatgtatgacgtg
gggctccgcaaacaatacaggcctgacatgataatcctacagattcagatgtaccagttg
tcgcggctgcttcacgactaccaccgggatctctacagccacttggagcagcaggagatc
ggacccagcctgtacgccaccccctggttcctcaccgccttcgcctcgcacttccccctt
ggctttgtggccagagtctttgatatgttgttcctgcaggggtcagaggtcatcttcaag
gtggccatgagcttgctgggaagccacaagcctctgatcctgcaacacgagagcctggag
tccatcgtggacttcatcaagaccacgctgcccaacctgggcctggtgcagatggagaag
accatcaaccaggtttgtcagatggatgtgtccaagcagctgcaggcctacgaggtggag
taccatgtcttgcaagatgagctgcttgacacgcctccatccctcaaccaacaccaaaga
acagcacagctggagaggaccaatcagagcctccgacagcagaacctcgacctgcgcgag
gagctgcaggtgtcccaggctcgtgtctgcagcctgcagggccgggtggaggctctgtcc
cagtcggaggtcctgctgacggagcacgtctctgcgctggaggaagagaagaagcagcta
gtgagcacagtccaactcctccaggacatcctcaccagcctgggcacacactccaccccc
gatggacaaacactccccccgccctctgaaagacacacagtcacggctacagaaaaggtg
gaagagaaagagaggggggcgaacaggactgtggactcccctccccaccctttggttctt
ccagagggctcataa

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