Pseudochaenichthys georgianus (South Georgia icefish): 117445321
Help
Entry
117445321 CDS
T09629
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117445321 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117445321 (zcchc7)
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117445321 (zcchc7)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
117445321 (zcchc7)
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
117445321 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
117445321
NCBI-ProteinID:
XP_033936788
LinkDB
All DBs
Position
1:complement(26531866..26587303)
Genome browser
AA seq
634 aa
AA seq
DB search
MQFMYQDWEELEDDLYREDEGDSEGSEDNSELEFRLYSQLHYSSNAGVVEETGDEEGEQD
SEHLEKPEQIVNVDREQDKTGKSRPLSPDLSKLLQHKKKDKKPDKQKKGKSNPQVQRSLT
SLMEEVIVIDSGPDVISISEDDSADDTAAAADEDGVCALKGRSLRRLQTSTPALQGTQKR
TLGVPVTVVSSNSESDSSESESNSESESSDDLENWMILGPGNQDGDQSISLNLEGGSDSS
ADAEEKASWLVSSKDKDAGIYNRDKGARATGPRLSNRYYTDKSVQCRNCSKNGHLSKNCP
ESKQLVPCYLCGTPGHLSSECPNKHCNNCGLPGHLYNSCRDRAHWHQSCERCFMTGHSTN
ACPEIWRQYHITTETRTPLKPKGKDRGRTPAYCYNCSRRGHFGHVCIRKRMFNGTYPSTP
FINYYDTKKEIKSRGKWILLKVKELKKNGLLTNSSQTPLTPGPPNKRQKFSHHESNQQTH
HTPRQSPSNHKPGHIFFNDDDFQAPAPKARWNNRPKQQEGTEKPWKPKRPVPTSIKPLPP
KKIILNETDDFPRGGGKRRDTEKKGKKLGKKNHVPEKLPKYHPRWLKTEEMQGSASKQEK
GKRNKRNRYRKNSDASQYPTDENLFTIKQRKRHR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcatgtaccaggattgggaggagttggaggacgatctctatcgggaggatgaa
ggggactctgaggggtcagaggacaacagcgagctggagttccgcctctacagccagctc
cactactcctctaatgccggggtggtggaggagacaggagatgaggagggggaacaggac
agtgagcatctggagaaacctgagcagattgtaaatgtggacagagaacaggacaaaact
ggaaaaagtaggccgctgtcaccggatttgagcaagttactacagcacaagaagaaggac
aagaaacctgataaacagaaaaagggtaaaagtaaccctcaggttcagaggtcattaaca
tcattaatggaggaggtcatcgtgattgactccggccctgatgtcatctccatctctgag
gatgacagtgctgatgacactgctgctgctgctgatgaagacggagtctgcgccttaaag
ggacgaagcttaagacggctgcagacttcaaccccggccctacagggaacccagaaaaga
actttaggcgtcccggtgacagtggtctccagcaactcagagtctgattcaagcgagtct
gaatcaaattctgagtccgagtcatctgatgatctggaaaactggatgatcctgggtcca
gggaaccaggacggagaccagagcatctcacttaacctggagggagggtctgacagcagc
gcagatgctgaagagaaggccagctggttggtttcgtcaaaggataaggacgctgggatc
tataacagagacaagggtgcgagagcaacggggccgcggctgtcaaaccgatactacacc
gacaagagcgtccagtgtagaaactgcagcaagaacggacatctctccaagaactgccca
gagtccaaacagttggtgccctgctatctttgtggaaccccaggccacctgtccagtgaa
tgtcccaacaagcactgcaacaactgcggcctgcctgggcacctctacaactcctgcaga
gacagagcgcactggcaccagagctgtgagcgctgcttcatgacaggccactcaacaaat
gcttgtccagagatctggagacagtatcacatcacaactgagacacgcactcctttgaag
ccgaagggaaaagaccggggtcggacccccgcctactgctacaactgctccaggagaggg
cactttggacatgtgtgtatacggaaaaggatgttcaacggaacgtatcccagcacaccg
tttatcaactactacgacactaagaaggagatcaaaagtagaggaaagtggatattattg
aaggttaaagagctgaaaaaaaatggccttttaactaacagttctcagacccctttgact
ccaggaccgccaaacaagagacagaagttcagccatcacgaaagcaaccaacagacccac
catacacctcgccaaagccctagcaaccacaaaccaggccatatctttttcaatgacgat
gactttcaggctccagcacccaaagcgagatggaacaataggcccaaacaacaggaaggc
actgagaaaccatggaaacccaagagaccggtccccacttccataaaacctcttccaccc
aaaaaaattattttgaatgaaacggatgactttcccagaggaggaggcaaaagaagagat
acagagaagaaggggaagaagttgggaaaaaagaatcatgttcctgaaaagctaccaaaa
taccaccctcgttggcttaaaactgaagagatgcaggggtcagcgtcaaagcaagagaaa
ggaaagaggaataagaggaaccgataccggaagaactctgatgcttcacagtacccaacg
gatgagaacctgtttaccatcaaacagaggaaacgccacagatag
DBGET
integrated database retrieval system
