Pseudochaenichthys georgianus (South Georgia icefish): 117445325
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Entry
117445325 CDS
T09629
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X4
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117445325 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117445325 (hnrnpm)
Spliceosome [BR:
pgeo03041
]
Common components
Common spliceosomal components
hnRNP proteins
117445325 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_MARF1
RBD_DEAH11
HnRNP_M_NLS
Motif
Other DBs
NCBI-GeneID:
117445325
NCBI-ProteinID:
XP_033936791
LinkDB
All DBs
Position
4:complement(2496583..2505064)
Genome browser
AA seq
720 aa
AA seq
DB search
MSTEQAESITVTEKAVQLPPPAQQQQSPPGDVNGKIKLDLNSSRKERPQKRAGGGRFEPY
GNVNKRYRVFVSNIPYDVKWQALKDLMKEKVGEVTYVEHLMDTEGKSRGCAVVEFRTEEL
MKKAVEKVNKHNLNGRPLKVKEDPDGVIAQREINKTQGGGHPGGHGGMGGMGNMGGMGVM
GGMDRINMERMGPGPGNGNVNIPPSLMNNPNIPNEVIHGLQAGRIGSTVFVANLDYKVGW
KKLKEVFSMAGIVVRADILEDKDGKSRGMGTVTFDMPIEAVQAVSMFNGQLLFNRLMHVK
LDEKSLPKDFGPPERASSALPRGLSGIGLGLGPNGQPIDATQLNRGGGGGGGGGGGMGNM
GPGGMDGMGFGNMGGRMGGGSGGGGMDNFGGMNNMERFGSSGMGRANEMERGIGGAFERE
FGRNDMGMSRNNFGESFERGMGNSQGMDRMSSGMDRMGGGMDRMGGGMERMGGGMDRMER
GADLERIGSGFDRMGSGMDRQGPSMDRLGPGLDRMSSSMDRLGPAGFDRLGPSGLDRMGS
GLDFSSPMGMDRMSNTGIDRMPTSFDRIGSTGGIDRFPSGGGMDRMNSGGMDRMGSGSVG
GQFDRSAELERGFGGNSFGGAGGPGAGGGGGGGGNNNNIRKGCQIFVRNLPFDFNWKMLK
DTFNTCGMVQYADIKMENGKSKGCGVVRFDTPETAERVCRTMNGYRLNGREIDVRIDRNA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgagcaggccgagagcattacggtgaccgagaaagcagtccagctgccgccg
ccggcgcagcagcagcagtcgccgccgggcgatgtgaatggaaaaatcaagcttgatctc
aattcaagcaggaaggagagaccccagaagagagctggaggtggtcgcttcgaaccctat
ggaaacgtgaacaagcgatacagggttttcgtcagcaacatcccatacgacgtcaaatgg
caggccctcaaagacttgatgaaagagaaagtgggtgaggtaacgtacgtggaacactta
atggacacagaaggcaaatcgaggggttgcgctgttgttgagttcaggaccgaagagctg
atgaagaaagccgtggagaaagtcaacaagcacaatctcaatggacgtccccttaaagtg
aaagaggaccctgatggtgtgattgctcagagagaaatcaacaagactcaaggtggagga
catccaggaggccatggtggaatggggggaatgggcaacatgggaggcatgggagtaatg
gggggaatggatcgcattaacatggagcgaatgggcccaggaccaggaaatggcaacgtt
aacattccccctagcctgatgaacaaccccaacatccccaacgaggtcatccacggtctc
caggccggcaggattggcagcactgtctttgtggctaatctggactacaaagtgggctgg
aagaagctgaaggaggttttcagcatggcaggcatcgtggtgagggccgacatcctggag
gacaaggatgggaaaagcagaggcatgggcacagtcacattcgatatgcccattgaagca
gtccaagctgtctctatgttcaatggacagcttttattcaacagactgatgcacgtcaaa
ctggatgagaaatccctgcccaaagattttggaccacctgagagagcttcttctgctctt
ccccgtggcctgagtggtattggcctgggtctgggacctaatggccagcccatcgatgcg
acccaactgaacagaggaggaggtggaggaggaggaggtggcggaggaatgggcaacatg
ggccctggaggaatggatggaatgggcttcggcaacatgggcggtcgtatgggaggcggc
agtggagggggaggaatggacaactttggaggaatgaacaacatggagcgtttcggttct
tccgggatgggccgggctaacgagatggagcgtgggattggtggtgcttttgagagggag
tttgggcggaatgatatgggaatgtctcgcaataattttggagagtcgtttgaaagagga
atgggaaactcccagggtatggaccgcatgagttctggcatggaccgcatgggaggcggc
atggaccgcatgggaggcggcatggagcgcatgggaggtggcatggacaggatggagcgc
ggggctgacctggagaggatcggctctgggtttgaccgcatgggctcagggatggatcgt
cagggacccagtatggaccggctcggacccggcctggaccgcatgagttccagcatggac
cgcctgggcccggctgggtttgaccgccttggcccctccggattggatcgcatgggttct
ggcctggacttcagctccccgatgggaatggatcgcatgagcaataccggcatcgacaga
atgcccaccagcttcgaccgcatcggctccactggaggaatcgaccgcttcccctccggc
ggcgggatggaccgcatgaactccggcggcatggaccgcatggggtccggcagcgtcggc
gggcagtttgaccgctctgcagaactggagcgtgggttcggaggcaactccttcggagga
gctggaggtcctggagctggtggaggaggcggcggcggcggcaacaacaacaacatcagg
aagggatgccagatctttgtcagaaatctgcccttcgacttcaactggaagatgctgaag
gataccttcaacacatgtggcatggttcagtatgctgatatcaagatggagaacggaaag
tctaagggctgcggcgtggttcgcttcgacaccccagaaactgccgagcgcgtctgcagg
accatgaacggctaccggctgaacggcagagaaatcgatgttagaatcgatagaaatgca
taa
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