Pseudochaenichthys georgianus (South Georgia icefish): 117445330
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Entry
117445330 CDS
T09629
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117445330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117445330
04131 Membrane trafficking [BR:
pgeo04131
]
117445330
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117445330
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117445330
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117445330
mRNA cycle factors
P-body specific factors
117445330
Membrane trafficking [BR:
pgeo04131
]
Others
Actin-binding proteins
Myosins
117445330
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117445330
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117445330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Myosin_N
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
117445330
NCBI-ProteinID:
XP_033936804
LinkDB
All DBs
Position
4:7228169..7245727
Genome browser
AA seq
1650 aa
AA seq
DB search
MTSLELYSKGARVWVPDPDAVWVSALLLKDYSPGDNNLLLQLSDGEEAHYPLASPSDLPP
PGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYNSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT
YLLEKSRVVFQASAERNYHIFYQLCASRELPEMRSFKLDAPENFRYTSQGGETQIPGTDD
LLDLERTRNAFTILGVQPDQQMELFRILAAVLHLGNVNIQASGRNSDRSYIDAEDRPLAV
FSKLLGVDGPQTAHWLCHRRLAVGGEMLVKPVSGQQALEARDALSKHIYGQLFTWTVQRL
NSALHSQKGQTKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYI
REELAWSRIEFSDNQLCINLIEGQLGLFDLLDEECRMPKGSDESWVRKLYDQHLSSKPHP
HFQKPRMSNSAFVVLHFADTVQYECDGFLGKNRDTVFEELINILRASQSELVAELFQQQG
NASSVANGSVRSGKRATREHKLTVGFQFRQSLEMLMDTLNSTTPHYVRCIKPNDLKEPFM
FDPRRTVQQLRACGVLETIRISAAGFPSRWTYEEFFCRYRLLLHGPLTQDQAQASCRLTL
PRLIPDPDQYCFGKTKVFFRAGQVALLERLRAERLRVAAVIIQSRVRGWLGRVRFTRISW
ATVTIQRYCRGALARRLALTLRYTKAALVIQKTYRMVAVRQLFLTIRQATITIQAFGRGT
MARRRYRQVLVERAAVLLQARVRGWMARRAYRRVRAAVVFMQCCARRRAARRELMKLKTE
ARSVEKFRELNKGMEVKLMQLRADQEAREAAALRETLHAEREAGSAELEALKVTVQKMES
QKQEKPPPCPVISEKEVEERRRAEEKAAQDILQLTQDLQALQREKDSYCKEKEDLSARLF
EQEQAQEECVQQAVSQASASLRAELDEERRKYQGLLRDFTRLEQRYDNLREMSLLTEGTK
VHRRADSTQSLSLELPSPSTAPLSPFSSCLPSPEEVRRVSVTSPTLERRESVWSFQTPMD
QLMVSMDVAKDPAVKMKVEDLAHAYDAVRVANKLLESQLRSQSRHKEEELEALRGQISAA
SCGSSSAAGPQELQEVLEAKEQECVRLRREMTELKKTVSLRRLLTQVLPSAFTAETSSCP
SRSKPAVTGLLECRKKDENKLIKNLITDVRVDSALSLPPGLPASILFLCVRQADCSGDQT
LARSLCSAAVTAMKAALKKHSKDVDMTALWLKNVCLLHDLLRQHSPKQTLDSDDLAPLTV
DLSDLIRALSDLCIQAYQQLLSITEKRLQNIIVPAMLESETIPGLSVSTVKLVASRKRAG
SDPRPVGGDAPSMAAVLRELGALHTALSHQALPPSQMEQAFHQLTYLISTSALNSLLLRK
DMCCWSRGMQIRYNVSLLEEWLRSKGLQTGGAVATLEPLIQAVQLLQAGKKSEADAKALV
QTCTALSSQQIVKILTLYTPHSDLDERVTLNFIRTVQGLLKGCSDGQPPQLLMDVRRVFP
VTFPFSPPAALHAEQLVIPDSLKISFLRRA
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgacctcactggagctatacagcaagggagcaagggtgtgggttcctgacccggatgct
gtttgggtgtcagctctgctcctcaaggactacagccccggagataataacctgctgcta
cagctctctgatggggaggaggcccattaccctttggcgtccccctctgatctccccccg
ccggggaaccctgacatcctggagggggagaacgacctgacggctctcagcttcctccat
gaacctgctgtcctgcacaacctgcgggttcgattcctggactacaacagcatctacacg
tactgtggtatcgtgttagtggccattaatccctatgaccagctgcccatatatggagag
gaggtgatcgatgcttacagcggtcaggacatggccgacatggagcctcacatattttct
gtggccgaggaagcctaccgcacaatgaccagggaggagaaaaaccagtcgatcatcatc
agtggagagtctggctcggggaaaacggtctcagccaaattcaccatgcgatactttgct
gtggtcggaggagcggcccagcagaccagcgtggaggagagggttctggcctccaaccca
atcatggagtctattgggaatgctaaaaccactcgcaatgacaacagtagtcgttttggg
aagtacatcgagatcggctttggcagaaaaggagacatcatcggggcgaacatgaggacg
tatctcctggaaaagtctagggttgtcttccaagcatcagcagagaggaactaccacatc
ttctaccagctgtgtgcctccagagagttgcctgaaatgagatcctttaaactggatgca
cctgagaatttccgctacaccagccagggaggagagacgcagattcctggtactgatgac
ctgttggacctggagcgcactcgcaacgctttcaccatcctgggagtgcagcctgaccag
cagatggagctcttcaggatcctggcagctgttctgcacctcggaaatgtcaacatccag
gccagtgggagaaattctgacaggagttatattgatgcagaagaccgccccctggcagtc
ttctctaagctgctgggagtggacggacctcagacggcccactggctgtgtcaccgcagg
ctggctgtggggggggagatgctggtgaagccggtgtccggtcagcaggccttagaagcc
agagatgccctctccaaacacatctatggtcagctgttcacatggactgtccagaggctc
aactccgccctgcacagccagaagggacaaaccaagtcctttataggggtgctggacatc
tatgggtttgagacttttgaccggaacagttttgagcagttctgtataaattatgccaat
gaaaaactgcaacagcagttcaacaggcatgtgttccacttggagcaggaggaatacatc
cgggaggagctggcctggagccggatcgagttcagtgacaatcagctgtgcatcaatctg
atcgaggggcagctgggcctgttcgatctgctggacgaggagtgcaggatgcccaaaggg
tcagatgaaagctgggtacggaagctgtacgaccaacacctgagcagcaagccccaccct
catttccagaaaccccgcatgtccaacagcgccttcgtcgttctgcacttcgctgacacg
gtgcaatacgaatgtgatggcttcttaggaaagaatcgagacacagtctttgaggagctc
attaacatcctcagagcaagtcagtccgagctggtggctgagttgttccagcagcaggga
aacgcttcctctgtggctaatggaagtgttcgctcagggaaaagagccaccagagaacat
aaactgacagtgggtttccagttccgacagtccctagagatgctaatggacactctgaac
agcaccactcctcactatgtccgctgtattaaacccaacgatctcaaagaaccatttatg
tttgaccccaggaggacagtccagcagctgagagcctgtggggtgctggagacaattcgt
atcagtgctgcaggttttccatccaggtggacgtacgaggagttcttctgcaggtaccgc
ctcctgcttcacggccccctgacccaggatcaggctcaggcctcctgcagactcaccctg
cctcggctcatcccggacccggaccagtactgcttcgggaagaccaaagtgtttttccgg
gccggtcaggtggctctcctggagaggctgagagcggagaggctgcgtgtcgccgcggtg
atcatccagagccgggtcagaggatggctgggccgggtcagattcacccggatcagctgg
gcgaccgtcaccatccagagatactgcagaggagctctagccaggcgactggccctgact
ctgcgctacactaaggctgctctagtgatccagaagacgtaccgcatggtggccgtcagg
cagctgttcctcacgatccgacaggccaccatcaccatccaggccttcggcagaggaacc
atggcccgccgcagatacagacaggtgttggtggagcgtgctgctgtgctgctccaggcg
agggtgcgtgggtggatggcgaggcgggcgtacaggcgggttcgtgcggcggtggtgttc
atgcagtgctgcgcgcgccgcagggccgccaggagagagctgatgaaactgaagacagag
gcccgatccgtggagaagttcagagagctcaacaagggcatggaggtcaaactgatgcag
ctcagagcagaccaggaggccagggaggctgcagctttgagagagacgctgcacgccgag
cgagaggccggcagcgctgagctggaggcgctgaaagtgacggtacagaaaatggagagc
cagaaacaagagaaacctccaccctgccccgtcatcagcgagaaggaggtggaggaaagg
aggagagctgaggagaaagctgcacaggacatcctgcaactcacacaagacttgcaagcc
ctgcagagagaaaaggacagttactgcaaagagaaagaggatctctctgctcgcttgttt
gaacaagaacaagcacaagaagagtgtgtgcagcaggctgtgtctcaggcgagtgcatct
ctgagggcggagctggatgaggagaggaggaagtaccagggtctcctgagagacttcacc
agactggagcagagatacgacaacctcagggagatgagtctgctcaccgagggcaccaaa
gtccacagaagggcggactccactcagagtctgagtttagagctcccctctccgtccacc
gccccgctgtcacccttctcatcatgcttaccctccccagaggaggtccgcagggtcagc
gtgacttctcccaccctggagcggagagagtcggtgtggagcttccaaacaccaatggat
cagctgatggtgagcatggacgtggccaaagacccggctgtgaagatgaaagtagaggac
ctggcacacgcttacgatgctgttcgagtggccaacaaactcctggagagccagctgcgc
agtcagagccgtcacaaggaggaggagctggaggctctgaggggccagatcagtgccgct
agctgtggctcttcctctgctgcagggccgcaggagctgcaggaagtactagaggccaaa
gagcaggagtgtgtgagactgaggagagagatgacggagcttaaaaagacagtgtcgctc
agacgactcctgacacaagttctcccgtcagcgttcactgcagagacttcctcctgtcct
tcccgatcaaagccggcagtcactggtttgctggagtgcagaaagaaggatgaaaacaag
ctcattaaaaacctcatcacagacgtccgtgtggacagcgccctctctcttcctcccggc
ctgcctgccagcatcctcttcctctgtgtccgtcaggcggactgcagcggggatcagacg
ctggcccgctccctctgcagcgccgctgtcaccgccatgaaggctgctctgaagaaacac
agtaaagacgtagacatgacagctctgtggctgaaaaacgtctgtctgctacacgacctg
ctgcgccagcactccccgaaacagacccttgactcggacgacctagctcctctgaccgtt
gatctgagtgacttgatccgcgccctgagtgacctctgcatccaggcctatcagcagctc
ctctccatcactgaaaagcgcctgcagaacatcatcgtccctgctatgctggagagtgag
accatccccggtctctctgtctccacggtgaagttggtagcgtccagaaagcgagccggc
tctgacccccggcctgtgggaggcgatgctccctcgatggcggcggtgctgagggagctg
ggggcgctgcacaccgccctgtcccatcaggctctgcccccctctcagatggagcaggcc
ttccaccagctcacctacttaatctccacctccgctctcaacagcctgctgctgaggaaa
gacatgtgctgctggagccgcggcatgcagatacgctataatgtgagtctgctggaggag
tggctgcggagcaaagggctgcagacagggggcgctgttgccacactggagcccctcatc
caggcggttcagctgctgcaggccgggaaaaagagcgaggcggatgcaaaggccctcgtt
cagacctgcactgccctgtccagccagcagattgtgaagatcctgaccctctacacgccc
cacagtgacctcgatgaaagagtcacactgaatttcatccgtactgtccagggtcttctg
aaaggctgctctgacggccagcctccgcagctcctcatggatgtgagacgagtgtttcct
gtcacatttcccttctcgcctcctgccgccctccacgctgagcagttagtcatcccagac
tccctcaagatctcctttctacgcagagcttag
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