Pseudochaenichthys georgianus (South Georgia icefish): 117445341
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Entry
117445341 CDS
T09629
Symbol
myo1f
Name
(RefSeq) unconventional myosin-If
KO
K10356
myosin I
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117445341 (myo1f)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117445341 (myo1f)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117445341 (myo1f)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117445341 (myo1f)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117445341 (myo1f)
04147 Exosome [BR:
pgeo04147
]
117445341 (myo1f)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117445341 (myo1f)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Phagocytosis
Others
117445341 (myo1f)
Others
Actin-binding proteins
Myosins
117445341 (myo1f)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117445341 (myo1f)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117445341 (myo1f)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Proteins found in most exosomes
117445341 (myo1f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
SH3_1
SH3_2
SH3_9
nSTAND3
IQ
ABC_tran
NPHP3_N
AAA_22
RapZ-like_N
AAA_16
Microtub_bd
Sigma54_activat
IQCJ-SCHIP1
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
117445341
NCBI-ProteinID:
XP_033936825
LinkDB
All DBs
Position
4:20588720..20607496
Genome browser
AA seq
1086 aa
AA seq
DB search
MAKYHWQSQNVKQSGVDDMVLLSKITEDAIVDNLKKRYMDDYIFTYIGPVLISINPFKQM
PYFTDREVELYQGAAQYENPPHIYALSDYMYRNMMIDAENQCVIISGESGAGKTVAAKYI
MGYISKVSGGGSKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPD
GGKISNFLLEKSRVVNQNENERNFHIYYQMIEGANTQQKEALGIMTPDYYYYLNQSGTYK
VDGTNDSKDFQETMEAMQVIGIPGDIQAQVLQIVAGILHLGNITFIEAGNYGQVESTDLL
AFPAYLLGIDPNRLQDKLISRKWDGKGESIKVTLNQEQATYTRDALAKALYARLFDYLVE
AVNKAIQKPCEEFSTGVLDIYGFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYV
QEGIKWTPIEYFNNKIVCDLIENKLNPPGIMSVLDDVCATMHAKGEGADGTLLQKLQAAV
GTHEHFNSWNSGFVVHHYAGKVSYDIKGFCERNRDVLFPDLIELMQSSEYHFICSLFPEK
LNTDKKSRPTTASSKIKKQANDLVSTLMKCTPHYIRCIKPNETKRPKDWEESRGRHQVEY
LGLRENIRVRRAGFAYRRPFNKFLMRYAILTAETWPCWRGPEQQGVLHLLRSVNMDTDQY
QMGRNKVFVKNPESLFLLEEMRERKFDTFARIIQKSWRRYIARKKYEQMREEASDILYNS
KERRRNSINRNFVGDYLGLEQRPELRQFLAKRERVDFADSVNKFDRRFKSIKRDLILTPK
GIYLIGLEKVKKGPEKGQIKEVLKRKLEFGNISGVSLSTRQDDFFILHEAQYDSLLESNF
KTEFLSLLSKRYEDINKRKLTISFTDRLEFRVKKEGWGGGGSRMVVFLSGQGNLAQIKPG
GKTLTITVGDGLPKSSKPTRKGAPQSQGGGGRNNVGNRGHQNGAAKFSRAPQSQPSEITY
STPNKHGRPPSTAPPKLGSQRAPRVPVHNQNNQGNMDFLNVPDQGMSGKQRKRSISQRPP
PAPKPQPRPQGPRCRAIYQYIGQDTDEISFDVNDEFDLVKADSSGWWTGRHQGREGLFPG
NYVEKI
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtaccactggcagagtcaaaatgtgaagcaaagcggcgtggacgacatggtg
ctgctatccaaaatcactgaggacgccatcgtggacaacctcaagaaaagatacatggac
gactacatatttacgtacatcggccctgtgctgatatcaatcaacccgttcaaacagatg
ccgtatttcactgaccgagaggtcgaactctaccaaggagctgcccaatatgaaaacccc
ccacacatctacgccttgtctgactacatgtacagaaacatgatgatcgatgcagagaat
cagtgtgtcatcattagcggtgagagtggtgcaggaaagacggtggcagccaaatacatc
atgggttacatttccaaagtatctggaggaggatcaaaagtgcagcatgtaaaagacatt
atcctacagtcaaatcctctgctggaagccttcggtaacgccaagaccgtccgcaacaac
aactccagtcgttttgggaaatactttgagattcagttcagcagaggaggagagccagac
ggcggcaaaatctcaaacttcctgctggagaagtcgagggtggtgaaccagaatgaaaac
gagagaaacttccacatttactatcagatgatagagggcgcaaacactcagcagaaagag
gccctgggcatcatgacgccagactattactactatctcaaccagtctgggacctacaag
gtggacgggaccaatgacagcaaagacttccaagagactatggaggccatgcaggtgatt
gggataccaggagacatccaggctcaggttctgcagatcgtcgcaggcatcctccacctg
ggaaacatcacctttatagaggcaggcaactatgggcaggtggagagcacagacttgctt
gcattccccgcctatctgcttggcatcgaccccaaccgtctgcaggacaagctgatcagc
cgcaagtgggacgggaagggagagtccatcaaagtgactctgaaccaggagcaggccacc
tacacccgagacgccctcgccaaagccctctacgcacgcctctttgactacctggtggag
gccgtaaataaagccattcaaaaaccatgtgaagaattcagcaccggagtacttgacatt
tatggctttgagatattccagaaaaacggctttgagcagttctgtatcaactttgtcaac
gagaaactgcagcagatctttattgaactgactctgaaggctgagcaggaagagtacgtt
caggagggcatcaaatggactcccatcgagtacttcaacaacaagattgtgtgcgacctg
attgaaaataaattgaaccctccaggcataatgagcgttctggatgacgtgtgcgccacc
atgcacgccaaaggagagggtgcagacggcacgctgctgcagaaactgcaggccgccgtg
ggaacgcacgaacatttcaacagctggaactctggtttcgtcgtacatcactacgctggc
aaggtgtcgtacgatatcaaaggcttctgtgagaggaaccgggatgtgctgttccccgac
ctcatcgagctcatgcaaagcagtgaatatcacttcatctgtagcttgttccctgaaaaa
ctcaacacagataagaaaagcaggccgaccacagccagctccaagatcaagaaacaagcc
aatgatctggtgagcacgctgatgaaatgtactccacactatatccgctgcatcaaaccc
aatgaaacaaaaagacccaaagactgggaggagagcagggggaggcatcaggttgaatat
ctcggactgcgggaaaacattcgtgtaagaagggctggatttgcgtaccgcagacccttc
aataagtttctgatgaggtatgccattctgacagcggagacgtggccatgttggaggggt
ccggagcagcagggggtccttcacctcctccgctccgtcaacatggatactgaccaatac
cagatgggccgcaacaaggtctttgtgaagaaccctgaatcgcttttccttctagaggag
atgagggagaggaagttcgacacttttgccaggatcattcaaaaatcctggaggagatac
atcgccaggaagaagtatgagcagatgagagaggaggcctcagacatcctgtacaactcg
aaggagcgaaggaggaacagcatcaacagaaactttgtgggagactacctcggcctggag
cagaggcctgagctgcggcagttcctcgccaagagggagcgcgttgacttcgccgactcc
gtcaacaagtttgatcgcagattcaagtctatcaagagagacttgatcttgactcccaag
gggatctatctgattggtctagagaaagtgaagaaaggacccgagaaggggcagataaag
gaggtgttgaaacgaaagctggagtttgggaacatcagtggcgtctctctcagtacgaga
caggatgatttcttcatcctacatgaggcccagtacgacagtctgctggagtccaacttt
aagacagagttcctcagtctgctgtccaaacgctacgaggacatcaacaagagaaaactg
acgatctccttcaccgacaggttggagttcagagtgaagaaggagggctggggtggagga
ggctccaggatggtggtgtttctgagcgggcaagggaacctggctcagatcaaacccggt
gggaagaccctcaccatcacagtgggtgacggtctgccaaagtcttctaagccaacgagg
aagggtgccccgcagtctcagggtggtggagggagaaataatgttgggaacagagggcac
cagaatggagcagccaagttttccagagcccctcagagccaaccatcagaaatcacgtat
tctaccccgaacaaacatggccgcccacccagcacagccccacccaaactgggctcccag
agggcccctcgagtcccagtccataaccagaacaaccaggggaacatggacttcctcaat
gtgcctgatcagggcatgtcagggaagcagaggaagaggagcatcagtcagcgacctcct
cctgctcctaaaccacagccgcggccccaagggcctcgctgccgggcgatttaccagtac
atcggccaggacacagacgagatcagcttcgatgtcaatgacgagttcgacctcgtcaaa
gcagattcatcagggtggtggacgggcaggcatcaaggaagggaaggccttttccctggt
aattatgtggaaaagatctga
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integrated database retrieval system
