KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117445428
Entry
117445428         CDS       T09629                                 
Symbol
polr2eb
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03020  RNA polymerase
pgeo03420  Nucleotide excision repair
pgeo04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117445428 (polr2eb)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117445428 (polr2eb)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    117445428 (polr2eb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgeo03021]
    117445428 (polr2eb)
   03400 DNA repair and recombination proteins [BR:pgeo03400]
    117445428 (polr2eb)
Transcription machinery [BR:pgeo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117445428 (polr2eb)
  RNA polymerase III system
   RNA polymerase III
     117445428 (polr2eb)
  RNA polymerase I system
   RNA polymerase I
     117445428 (polr2eb)
DNA repair and recombination proteins [BR:pgeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117445428 (polr2eb)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 117445428
NCBI-ProteinID: XP_033937010
LinkDB
Position
4:complement(8931343..8934480)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFIFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQIGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMLKEEVVELLLRYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaagaggaaacatacaggctatggaagatccgtaaaaccatcatgcagctg
tgccatgacagaggctacctggtgactcaggacgagttggaccagacgctggacgagttc
aagagtcagtttggagacaaacccagcgagggtcggccccggcgcacagacctcaccgtg
ctggtggcgcacaacgatgaccccaccgaccagatgttcattttctttccagaggagcca
aaggttggaatcaagacgattaagatgtactgtcagaggatgcaggaggaaaacattaca
cgcgccatcattgttgttcagataggcatgacaccatcagccaaacagtctctagttgac
atggcccccaagtacattttggaacagttccttcaacaggagctgctcattaacatcaca
gagcacgagcttgttccagagcacatcgttatgctaaaagaggaagtggttgaacttctg
ctaagatataaactaaaggaaagtcagttgccgaggatccaggctggagaccccgtggct
cgctactttggcttgaagagaggacaggtagtaaagatcatcagacccagtgaaacagct
gggaggtacatcacatacagactggtgcagtga

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