Pseudochaenichthys georgianus (South Georgia icefish): 117445433
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Entry
117445433 CDS
T09629
Symbol
efcab7
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7 isoform X1
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117445433 (efcab7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117445433 (efcab7)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
EVC complex
117445433 (efcab7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EH
SPARC_Ca_bdg
EFhand_Ca_insen
EF_assoc_2
Dockerin_1
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
117445433
NCBI-ProteinID:
XP_033937019
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Position
4:complement(22438780..22456897)
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AA seq
616 aa
AA seq
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MSFQETPVPSDEDEAFYVHCRAAYLAVFRSSLTNISSKQQLCRALQQAGRNPTHATLNKY
WTPRTSKLNFDEFFEILKSEKKTEETELMRAFKKMDVNSDGYISHSELEKALTTRGEKMT
TEEVNAIFSMADINKDGKLDYAEFCRLLVSTVEQCQMAALERLEANAKLKRQNFGSQSYS
PPKSSVSSAAATLPQPPETPRAESDTTLKKDSRSSSRPSSARSRRSSLSNSITMTSSTNK
ASKIPEPSGLQDWHHSYMKGCFFLEDDGSISSLQYQLHLPQTTTVYLTIQPLSLSHGLDL
PSSWMTVDTALFVTSAGETKEDSTLVCFTETKEKEKYVWKGELDAGTYYLLPFTSGCRLK
KRSKKSLSIKPIELVYRTDTGELDLTRELREVLSDIFEVIDLDGNGLLSLEEYNFFELRT
SGEKCDKDSWAVCKENFDMRKNQLTRQGFMELNLMEATEKDGDPADLWVTLEAMGYNRML
ELVEACPVQLDVHCEGTQPAIQPLSLDSGPKLLIQALQKSITAKTGAKALRGQDNVFIYT
YRGEHRISSLIANKANQKVTVHVNNEQSRNCCSSRGMSVFAVEVPARTKLVCQHTLPINE
RQEWTYNCVESMLPGT
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccaggagacgcctgttccttctgatgaagatgaggctttctacgtgcattgc
agagccgcatatctagctgtatttagatcaagtttgacaaatatctcttcgaaacagcag
ttatgtcgtgctcttcagcaggctggtagaaacccaacacacgcaactctcaataaatac
tggaccccgagaacctccaaactgaactttgatgaattctttgagattcttaaaagcgag
aagaaaactgaagaaactgagctaatgagagcctttaaaaagatggatgttaacagtgat
ggctacatctcacacagtgaactggagaaagcccttaccacgagaggtgagaaaatgacc
actgaagaggtgaatgctattttctcaatggctgacataaacaaagatggcaaactggac
tatgcagaattctgcagattgcttgtgtctactgtagagcagtgtcagatggctgctttg
gagaggctcgaggctaatgccaagctgaagagacaaaactttggcagtcagtcatacagc
cctccaaagagctcagtgtcatcagcagcagcaactctccctcagcctccagaaacaccc
cgggcagaatcagacaccacacttaagaaagacagccgatcatcctcccgtccttcttcc
gctcgcagcagacggtcatccttgtcaaactccatcactatgacatccagcacaaataag
gccagcaaaataccagagccttcaggcttacaggactggcatcacagttacatgaagggc
tgtttcttccttgaggatgatgggagtatcagctctctgcagtaccagctccaccttccc
cagacaaccaccgtctacctaaccatccaaccactcagcctcagccatggactcgacttg
ccttcttcatggatgacagtggacacagctcttttcgtcacgtcagctggtgaaaccaaa
gaggactcaactttagtgtgtttcaccgagacgaaagagaaagagaagtatgtttggaaa
ggagaattggatgctgggacatactacctgcttcccttcactagtggctgcagactaaag
aaaagaagtaagaaaagcctttctattaaacctatagagctcgtctacaggactgacaca
ggagaactagacctcaccagggaactcagggaggtgctgtccgacatctttgaggtgata
gacttggatggaaatggtttgcttagtttggaagagtacaatttctttgagttgaggacc
agtggagagaaatgtgacaaggattcctgggctgtctgtaaagagaacttcgatatgagg
aagaaccagctgacgcgccagggttttatggagctgaacctgatggaggccacagagaaa
gatggagaccccgcagacctgtgggtcactctggaggccatgggctacaaccgaatgctg
gagctagtagaggcatgcccagtccagttggatgttcactgtgaaggcactcagccggcg
atccagcccctcagtttggactcagggcccaagcttctaatccaggccctccagaagtcc
atcacagcaaagacaggggccaaagcactgaggggacaagacaacgtcttcatctacact
tacagaggagaacacaggatctcctcccttatagccaacaaggccaaccaaaaagtgact
gtccatgtaaacaatgagcagagcaggaactgctgcagcagcagaggcatgagtgtgttt
gctgtcgaggtgccagccaggactaagctggtgtgccaacataccctgcccattaatgag
agacaggaatggacctacaactgtgtagagagcatgctccccggcacgtaa
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