Pseudochaenichthys georgianus (South Georgia icefish): 117445460
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Entry
117445460 CDS
T09629
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117445460 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
Ank_2
EGF_CA
Notch
Ank
EGF_2
NODP
NOD
Ank_3
Ank_4
Ank_5
EGF_Teneurin
EGF_3
EGF_DL_JAG
JAG1-like_EGF2
cEGF
Motif
Other DBs
NCBI-GeneID:
117445460
NCBI-ProteinID:
XP_033937066
LinkDB
All DBs
Position
4:6491714..6544230
Genome browser
AA seq
2498 aa
AA seq
DB search
MEQLPGVSSVKSLVVVFCFIHLSLALQCLNDKEPCVNNATCLTFKNGTEYCRCAPGFLGE
YCHHKDPCHPGFCLNGGNCSVLMSAGVPVPGSATCSCPLAYIGPHCQTPQNSTCYPNNPC
ANKGVCTLLTLNKSKCECPRGWTGEKCEHEDSCLSSPCANRGLCSSPSAGSYTCSCPPGY
TGPRCLNDTDECVATPSTCQNEGLCVNTPGSYKCTCTPGFTGRHCESSYIPCSPSPCLNG
GTCHQSSDISYSCHCLPGFNGTNCEHNIDDCPGHQCANGGTCMDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCSNLFGSYVCVCVNGWSGPDCSENIDDCATASCTPGSTC
IDRVASFVCLCPYGKTGLLCHRDDACISNPCREGSQCDTNPISGMFNCNCPPGYVGNTCN
SDRDECSISTNPCEHGGQCVNTDGSFTCNCVRGYAGPRCEQDVNECASSPCQNDGTCLDR
IGDYCCICMPGFEGIHCEIEVDECLSSPCLNQGKCLDQVSRFVCECPAGFSGEMCQIDID
ECSSTPCLNGAKCIDRPNGYDCECAEGFTGLLCEENINDCVPEPCHHGVCKDGIATFSCE
CHPGYVGSICNIQVQECHSNPCQNRGRCVDLVNAYQCNCSPGTTGVNCEINEDDCASNPC
EYGECHDGINEFKCVCAPGYTGLKCDVEINECISNPCMSGGTCVDKVNGFHCLCPPSTHG
PLCLSGTDHCTPQPCAHGECVEQQHGYHCECEAGWVGEHCEQEKDECQPNPCHNDGSCVD
RHNGFTCMCHSGFRGNNCEMNIDECASGPCQNQGVCIDGVNSYSCQCSLQYKGKQCEVEQ
DPCSSKPCERGGVCKPSADFSSYTCKCAAGWEGTRCKEDVNECKSYPCKNGGNCVNNQGS
YMCKCISGYSGHNCQTDIDDCSPSPCLNGGSCVDRVWSFYCDCRAGFEGERCETEVDECD
SQPCRNGAICRDYVNSFVCECRPGFDGILCEHNILECTESSCLNNGTCIDDINQFSCRCR
PGFYGTFCEFEQNECDSQPCKNGGTCTDGLGTYRCTCPVEYSGQNCQNMVNLCNQVRCLN
GGTCSQISKSWTCHCQMGWTGLYCDVPNMSCQDFAARNGFEVENVCKSAGRCVNVGNSHR
CQCQPGYTGSYCAEMVDECQSNPCQNGATCNDYQGTYECICKSGYQGVNCEYDVDECHSQ
PCLHGGKCINRINRFTCVCRTGTHGYLCEVNVDDCAPKPGSFEPRCLNGGQCADGVGRYT
CSCPPGFVGEHCEGDLNECLSTPCHAPGSLDCVQLVNDYQCRCRLGYTGRHCESVVDLCL
SKPCHNGAICSMNKSSGHGYTCSCVPGFTGFNCGEMEGHSCTKQRCQNGGRCVESPGVPL
RCECQAGFSGTHCEKEQRCPWTCQNGGTCIKDPTNPYHYKCQCQMYFTGQYCENKPLVPR
TPTCPYPECAGRRGDSVCDGHCNNHECQWDGGDCSLKWPQPWENCTASIPCWDLFKDGHC
DKACNNAGCLFDGFDCMETTPTCKYDKYCEDHFGNSVCDKSCHTEACGWDGLDCSADLPP
KDVFGTLVIVVRLQPKELLGDLKGFLRSLGAVLHTNLRVKLDDKRQPMVYAYYWDVNEQH
KQLERRKRELEKEVIGSVVHLELDNRECAKTSTNCFKDTNETARFLAASQIKSGLPYPLV
SVSSTDPIPCCGPPIEWILVGVAVVIILLILVLGMLAAKRKHKHGHLWLPDGFSANKNDK
RREPVGQDDLDMKNFKTQDGAMIDGGQSQRWLEDEAPSKKQRTEDKPLLPIAMDGGVDRR
EWTLQHRKAADISLTPPQADLDANCLDVNVKGPDGCTPLMLATLRNGGGPDCSLHGEEEE
DSGGDEPGPSVISDLISQGASLMAQTDRTGETALHLAARYARADAAKRLLDAGTDPNVHD
NMGRTPLHAAVAADAQGVFQILIRNRATELDSRMNDGTTPLVLAARLAVEGMVEELIHCH
ADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAQ
VLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGGNSSVMC
GANGAGYIGMRPGAQGKKNRRGGGGAKVGGGAGNAKELKDMKAKRRKKPAGGEAPAAAAG
AGGGGGAATAGGNTNGVKAAGLPESSITMSPVDSLESPHSYTGDVSGTVSTTANSPPLLS
SPTSRPMLPPVSHMLGQQQSWVPMTKHGYSGHMFGLVPHQMGGSHSGMGQHHGQGAMLTP
MNVTMSREQLPPIVTFQMMAPGGGQAMLKQPQQGPVPQSQGPIQSQAHSQQGPGQLRCSQ
ALMYQMPEQMSRGHGMSHAMQHPHTVGHGGIEGQSRQLPSYPPMQSPVDKYPTPPSQHSF
TTTGSEGTTPGHSAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHHA
LPSSHRTHIPEQAQLQAQSQQMQPAAQQPQHGNMQVFA
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcttcccggtgtctcctcggtcaaatccctagtcgtggtcttctgctttatt
cacctctctctggcgctgcagtgtttgaacgataaggaaccttgtgttaacaacgctaca
tgtctgaccttcaaaaatggaaccgaatactgcaggtgtgcaccagggtttctgggggag
tactgccaccataaggacccctgtcaccctggcttctgcctgaatggagggaactgctct
gtgttaatgtcagctggagttcccgtaccaggcagcgcgacctgctcctgcccgctcgct
tacatcgggccgcactgccaaactccccaaaattccacgtgttaccccaacaacccctgt
gccaacaagggggtctgcaccctgctgaccctcaacaaatccaagtgcgagtgtcccaga
ggatggacaggagagaagtgcgagcatgaggacagctgtctctccagtccctgtgccaac
aggggactgtgcagctctccgtccgctgggagctacacatgttcctgtcctccaggatac
acaggtccgcgctgcctcaacgacacagacgaatgtgtagccacaccctctacatgccag
aatgaaggattatgcgtcaacacccctggctcctacaagtgtacctgcacaccagggttt
acaggcagacactgtgaaagctcatacatcccctgctccccctcaccatgcctgaatggg
ggcacctgccaccagagctctgacatcagctactcctgccactgccttccaggtttcaac
gggactaactgtgagcacaacatcgacgactgccccggtcatcagtgtgccaacggagga
acctgtatggacggagtcaacacctacaactgccagtgccctccagagtggaccggtcag
cactgtacagaggatgtggatgagtgtcgtctgcagccaaacacttgccagaacggaggg
acctgcagcaacctgtttggcagctacgtgtgtgtgtgtgtaaacggctggagcgggccc
gactgctctgaaaacatcgacgattgcgccacagcctcgtgcacgccgggctccacctgc
atcgaccgcgttgcctctttcgtctgcctctgcccctacggaaagacaggtctgctttgc
cacagagacgacgcctgcatcagtaacccgtgcagggagggctctcagtgcgacaccaac
cccatcagtggcatgttcaactgcaactgtcctccaggatacgtgggcaacacctgcaac
agcgaccgagacgaatgcagcattagcaccaacccttgtgagcacggtggtcaatgtgtg
aacacagacggctccttcacttgcaactgtgttagaggttacgccgggccgcgctgcgag
caagatgttaacgagtgtgcttcaagcccctgccagaacgacggcacatgtctggatcga
attggggactactgctgcatctgcatgcccggattcgaggggattcactgtgagatcgag
gtggacgagtgcctcagctcgccctgtctgaaccagggtaaatgtctggaccaggtcagc
cgctttgtctgcgagtgcccagcaggcttcagcggtgaaatgtgccagatagacatcgac
gagtgttccagcacaccctgtttaaacggagccaagtgtatcgaccgacccaacggatat
gattgtgaatgtgctgaaggattcacgggtcttctttgtgaagagaacatcaatgactgc
gtaccagagccgtgccaccacggtgtgtgtaaagacggcatcgccaccttctcctgtgag
tgccatcccggatacgtaggctccatctgtaacatccaggtccaggagtgccacagcaac
ccatgtcagaaccgaggacgctgcgtggacctggtcaatgcctaccagtgtaactgctca
cccggaaccacaggggtgaactgtgagattaatgaagacgactgtgccagcaacccctgt
gagtacggagagtgccacgatgggattaacgagttcaaatgtgtgtgcgccccaggatac
acaggacttaaatgtgatgtggagataaacgagtgtatctcaaacccatgtatgagtggg
gggacctgcgtggacaaggtcaacgggttccactgcctgtgcccccccagcacccacggc
cccctgtgcctctctgggactgaccactgcactcctcagccctgtgcgcatggagagtgt
gttgaacaacaacacgggtaccattgtgagtgtgaagctggctgggtgggagaacactgt
gagcaggagaaggacgagtgccagccaaatccgtgccataacgatggctcctgtgtggac
agacataacggcttcacgtgcatgtgccactctggattcagaggtaataactgtgagatg
aacatagatgaatgtgcgtccgggccctgtcagaaccaaggcgtgtgtatcgatggagtc
aacagttattcctgccaatgtagtctgcaatacaaaggcaaacaatgcgaggtggaacag
gatccctgctcctctaagccttgtgagaggggaggagtgtgtaaaccatcggcagacttc
tcatcgtacacctgtaaatgtgccgctggctgggaaggtacacgctgcaaggaggatgtg
aatgaatgcaaaagttacccgtgcaaaaatggcggtaactgcgtgaacaaccagggcagc
tacatgtgtaaatgtatctcgggatacagcggacacaactgtcagacagacattgacgac
tgctcaccaagcccgtgcctcaatggaggctcttgtgtggaccgtgtgtggagtttctat
tgtgactgccgtgcgggctttgagggggagcgctgtgagaccgaggtggacgagtgcgac
agtcagccctgcaggaacggggccatctgccgggactacgtcaacagctttgtgtgcgag
tgccgaccgggctttgatggaatcttgtgtgaacacaacatccttgaatgtactgagagt
tcctgtctgaataacgggacatgcattgatgacatcaaccaattctcctgccgatgccgc
cctggcttttacgggacgttctgtgagttcgagcagaatgagtgcgactctcagccatgt
aagaatggaggcacctgcaccgatggcctgggaacataccgctgcacctgccccgtggaa
tacagtgggcagaactgccagaacatggtgaacctttgcaaccaggtgcgctgtcttaac
ggcggcacctgctcacagatatccaagagctggacctgccactgtcagatgggatggact
ggtctctactgcgatgtccccaacatgtcctgccaggactttgctgccaggaatggtttt
gaagttgagaatgtgtgtaagagcgccgggcggtgtgtgaatgtgggtaactctcaccgg
tgtcagtgccagccaggatacacgggcagctactgtgcggagatggtggatgagtgccag
tcaaacccttgtcagaacggagctacgtgcaacgactaccagggcacatatgagtgcata
tgtaaatcaggctaccagggcgtgaactgtgagtatgatgttgatgaatgccactctcag
ccctgcctgcacggaggaaaatgtatcaaccgcatcaatcgcttcacctgcgtctgccga
actggaacgcatgggtacctgtgtgaagtgaacgtggacgactgtgctcccaagcctggc
tcctttgaacctcgctgtctgaatggaggacagtgtgcggacggtgtgggccgctacaca
tgctcctgccctccaggattcgttggagagcactgcgagggggatctcaatgaatgcctt
tccacgccctgccacgcccccggcagcctggactgtgtgcagctggtcaatgactaccag
tgtcgctgtcgccttggatacacaggtcgtcattgtgagtccgtggtggacctttgtctg
tcgaagccgtgccataacggcgccatctgctctatgaacaagagctcaggacatggctac
acctgctcctgtgttcccggcttcactgggttcaactgtggcgaaatggagggccacagt
tgtacaaagcaacgttgccagaatggtgggcgttgtgtcgagtcacccggggtccccctg
cgctgcgagtgccaggccggattcagcggaacccattgtgagaaagaacagaggtgtcca
tggacctgccagaacggaggaacctgcatcaaagacccaaccaacccataccattacaaa
tgccagtgtcaaatgtacttcactggacaatactgcgagaacaaaccactcgtcccacgc
acaccaacctgcccctatccggagtgtgcggggcgtcgaggggatagcgtgtgtgacggt
cattgtaacaaccatgaatgtcagtgggacggcggcgactgctcactcaagtggccgcag
ccttgggaaaactgcaccgccagtattccctgctgggatcttttcaaagatggacattgt
gataaggcgtgcaacaacgccgggtgcctctttgacggctttgattgcatggaaaccaca
cctacctgcaagtatgacaagtactgtgaagaccactttgggaacagcgtctgtgacaag
agctgccacacggaggcctgcggctgggacgggctggactgctcggctgaccttccccct
aaagacgtgtttggaacgctggtcatcgtggttcgcctgcagcccaaggagctgctcgga
gacctgaagggtttcctgcggtccctgggagctgtgctgcacaccaacctgcgagtgaag
ctggacgataagaggcagccgatggtgtacgcttactactgggatgtgaacgaacaacat
aaacagctggagaggagaaagagggagctggagaaggaggttataggatctgtggtgcac
ctggagctcgataaccgtgaatgcgcgaagacctcgaccaactgtttcaaagacactaac
gagactgccaggttcctcgcagcgtctcaaatcaagtctggactgccctaccctctggtg
tctgtcagcagtacagatccaattccatgttgtgggccaccgatcgagtggatcctggtc
ggagtggcagtggttattattctgctcatcctggtgctggggatgctggccgccaagagg
aagcacaaacacggtcacctgtggcttcccgatggcttctcggccaataagaacgacaaa
aggagagagcctgtcggtcaggatgaccttgacatgaagaacttcaagacccaggatgga
gccatgattgatggaggtcaaagtcagagatggctggaagatgaggccccatctaagaaa
caaagaactgaagacaaacccttgctgcccattgctatggatggaggtgttgaccgcagg
gagtggaccctgcagcatcgcaaggctgcggacatctccctcaccccccctcaggccgac
ctggatgctaactgtctggatgttaatgtcaaaggacctgatggctgcactccactgatg
ttggctacgctgcgtaatggtggaggcccggactgcagcctgcatggagaggaggaggaa
gacagtggaggagatgaaccagggccgagtgtgatttcagacctcatctctcagggtgca
tctctgatggcgcagacagatcgtacaggagagacggcgctccacctggcggcccgctac
gcccgcgctgatgctgctaagagactgctggacgctgggacggatcccaatgtgcacgac
aacatgggccgaactccactgcatgctgctgtggcggcggatgctcagggagtcttccag
attttgatccgtaatcgtgcaacagaactggattccaggatgaatgacggcactactcca
ctggtgctggcagcgaggctcgctgtggagggcatggtggaagagctgatccactgccac
gctgacatcaatgctgtggacgaccacggcaaatccgctctgcactgggcggcggcagtt
aataatgtggaggccactcttgtgcttttgaagaatggagccaaccgtgacatgcaagac
aataaggaggagacgccactgtttctggcagccagagagggcagctttgaggcggctcag
gttctcctcgaccattactccaaccgggacatcacggatcacctggaccggctgccccgc
gacactgctcaagagcgcatgcatcacgacatcgtgcgtctgctggaccagtacaacctg
gttcacagtccacacaacggccctaaccacatgggcgggggaaactcctctgtgatgtgc
ggggccaacggagctggatacatcggcatgcgccccggggctcaggggaagaagaacagg
aggggtggaggtggagcaaaggtgggaggtggagctggtaatgctaaggagctaaaagac
atgaaagcaaagagaagaaagaagccggccggaggagaggcgccggctgcagctgctgga
gcgggaggaggaggtggagcagcaacagccggagggaacacaaacggcgttaaggcagca
ggacttccagagagctccatcaccatgtcgcctgtcgactccctggaatcaccgcactcg
tacacaggagatgtgtccggcaccgtctccaccacagccaactcccctcccctcctgagc
agccccacctccagacccatgctgccccccgtcagccacatgctggggcagcagcagagc
tgggtgcccatgaccaagcacggctacagcggccacatgttcggcctggtgccgcaccag
atgggggggtcacactccggcatgggccagcaccacggccagggcgccatgctgaccccc
atgaacgtcaccatgagcagggagcagctgccgcccatcgtcacgttccagatgatggcg
cctggggggggccaggccatgctgaagcagcctcagcaggggccggtccctcagtcccag
gggccgattcagagccaggctcactcccagcaggggccaggccagctgcggtgctcccag
gctctcatgtaccagatgcccgagcagatgagcagggggcacgggatgtctcatgccatg
cagcacccccataccgtcggccacggggggatcgagggccagtcacggcagctgccctcc
tatccacccatgcagagccctgtggataaataccccactcccccctcccagcacagtttc
accaccaccggctcagagggcaccacccccggtcactccgcacacccaccaagcgagcac
ccgtatctcacgccgtcgcccgagtccccggacccctggtcgtcctcttcgccgcactcc
aactcggactggtctgatgtcaccaccagccccacccctctggggaacccccaccacgca
ctgccgtcttcacaccgcacacacattccagagcaggcgcagctgcaggcgcagtcgcag
cagatgcagccggccgcccagcagccgcagcacggcaacatgcaggtgtttgcgtag
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integrated database retrieval system
