Pseudochaenichthys georgianus (South Georgia icefish): 117445536
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Entry
117445536 CDS
T09629
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X2
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117445536 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117445536 (rubcn)
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Other autophagy associated proteins
Others
117445536 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
CMD
RecO_C
Motif
Other DBs
NCBI-GeneID:
117445536
NCBI-ProteinID:
XP_033937167
LinkDB
All DBs
Position
4:14931115..14952251
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AA seq
957 aa
AA seq
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MEISAEEEAEERRKEQWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILSHGL
KNEQVYYKQRDYWPFVWCVRYISPHLASHVEQFGHLEPVLSSGLRNAGESYKAERWLLHS
LQVHMLSAQLRPLLRHMGHTSKYYNGHAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDTF
GLSPLKGSTCLGLLKSQSLCVLPGAGTAWRNADSAPRGESLNRRLTTSNCSLREAFATSH
NSGSTTGVGPQNSNSTNPTSSSTGDPWLCVSRPGESKRGMTPPLSPGSIPGTSLSESPSP
TSFQPDAGDSCDCDYDDGPEYLAIGNLGQRSRCESQSSTQNSEVDFTPDLSMQRGPLAPS
PPRRSSFSEGQRGPGRGSRGHTRSLSDTGINQKLRNESAGQDCCIKNYSPFSPQRKDVST
PSSLYMESHGSQCSIVSDGMFRKPSEGQSLISYLSEQDFGSCADLEKENAHFSISESLIA
AIELMKYNLRRQQEAGEEEGDSDNEIQQLKQKIRLRRQQIRRSRLPPCANSQQLFHSTDS
GGSRRSSQDSYQGLSDSGSAEEVEECELQDGCEGQSLLAVSQNGLSLSLASLFTDADIKR
SMSSSNRSFLSSESISPAFLQSNSAESVAMGLLRQFEGMQLPAASELDWLVPEHDAPQKL
LPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPAPKRKIVVAKQNYRC
AGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQAVVPGRVLRKWDFSKYYVSNFARDLL
SKIAGDPLFNPNDINSGLYKKNKALEVVRVLRVQLFHMKNLFKTCRFAKEVLDQFDSLPG
HLTEDLHLFSLNDLSAVRNGDLTPRMKELLKHGTSHAAGCVLCQAKGFVCEFCGNEKDII
FPFQLNKCQRCEECHACYHRNCFRTGKDCPRCQRLAERRERLARKNMEEQEDEGGGP
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggagatatcagcggaggaagaggcggaggagcgcaggaaggagcaatggaagctgctg
tccagcctgaagaccacagtggagggtctcgtgtctaccaacaaccccaacgtgtggtca
cgttacggcggcctacaacgactccacaaggacatgaacaacatccttagccatggactg
aagaatgagcaggtgtactacaagcagagagactactggccgtttgtgtggtgtgttcgc
tacatcagcccccacctcgcctcgcacgttgaacagttcggtcacctggagccggtgctg
agcagcgggctgaggaatgctggggagagctacaaggccgagcgctggctccttcacagc
ttacaggttcacatgctgtctgctcagctcagacctctgctccggcatatgggacatacg
agtaaatactataatggtcatgcctttctgctgagtgagcctcatgtgaccgccatgttc
cagtgtctggaagccgtggagcagaataaccccaaactgcttgcccaagtagacaccttt
gggctgtcccctctgaagggctcaacctgtctgggcctattgaagagccagagcctgtgt
gtattgcctggagctggtacagcttggagaaacgcagactcggctcccagaggagaatct
ctaaatcgcagactcaccacctccaactgctcgctccgagaagcattcgctaccagccac
aactctgggagcactacgggagtcggaccccaaaacagcaatagcacaaaccctacctcc
agcagcacgggggatccctggttgtgtgtgtcccggccgggggagagcaagcgagggatg
acgccacctcttagccccggttcgatccctggcacctccctctcagagtccccctcgccc
acctcctttcagcccgatgccggggactcctgtgactgtgactatgacgacggtccggag
tatctggcgatcggtaacctagggcaacgcagccgctgtgaatcccaaagctccacccaa
aacagcgaggtggactttaccccggacctgtccatgcaacggggtcctctagccccgtcc
ccaccgagacgctcctctttctcagagggtcagagggggccgggccgggggtcccgagga
cacacccgctccttatctgacacggggatcaatcagaaactcaggaatgaatcggcaggg
caggactgctgtataaagaactacagccctttctcacctcagcgcaaggatgtcagcact
cccagttccctctacatggagtcccatgggtcccagtgcagcattgtttctgatgggatg
ttcaggaagccgtcggagggtcagagcctcatcagctacctgtcggagcaggactttggc
agctgtgctgacctggagaaggagaacgctcatttcagcatctcagagtcccttattgct
gccatcgagctgatgaagtacaacctgcggcgtcagcaggaggcgggggaggaggagggg
gacagcgacaatgagatccagcagctcaaacagaagatccgcctgcgcaggcagcagatc
agacgcagccgcctgccgccctgcgcaaactcccagcagctgttccactccactgacagc
gggggctccaggcggagctctcaggactcgtaccagggcctctctgactccggctcagca
gaggaggtggaggagtgcgaactgcaagatggctgtgagggtcagtccctgctggcggtg
tctcagaatggcctctccctgtccctcgcctcactcttcacagatgcagacattaagcgc
agcatgagctccagcaacaggtcgtttctcagctcagagtccatctctcccgccttcctc
cagtctaactcagcggagtcagtagccatgggtttactccggcagtttgagggcatgcag
ctccctgcggcctccgaactcgactggctggtcccagaacacgacgctccgcagaagctg
ctgcccatccccgactctctgcccatctctcctgatgatggcgaacacgcagacatctac
aagctgaggatcagggtgaggggcaacctggagtgggcccctccccgaccgcagatcata
ttcaacattcatcccgcccccaagaggaagatagttgtggctaaacagaactaccgctgc
gctggctgtggtactcgcatcgacccagattatatcaagcgcctgcgttactgtgaatac
ctcggccgttacttctgccagtgttgccatgagaacgcccaggcggttgttcccggccga
gtgttgaggaagtgggacttcagcaagtactatgtcagcaacttcgcccgggacctgctg
agcaagatcgcaggagaccctctgttcaaccccaatgacatcaacagtggcctgtacaag
aagaacaaagctctggaggtcgtcagggttttgagggtgcagctgtttcacatgaaaaat
ctcttcaagacctgtcgcttcgctaaagaggtgctggaccagttcgacagcctgccaggt
cacctcactgaagacctgcacctcttctccctcaatgacctctctgctgtacgcaacggg
gacctgactccacgaatgaaagagctgctgaaacatggcacctcgcacgcagctggctgt
gtgctgtgccaggcgaagggcttcgtgtgcgagttctgcggtaacgagaaagacatcatc
ttccccttccagctgaacaagtgccagcgctgtgaagagtgccatgcgtgctatcatcga
aactgcttccggacaggtaaagactgtcctcgatgtcagcggctggcagagcggagggag
aggctggcacgtaaaaacatggaggaacaagaagatgagggaggtgggccttag
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