KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117445560
Entry
117445560         CDS       T09629                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pgeo03036]
    117445560 (kdm4b)
Enzymes [BR:pgeo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117445560 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117445560 (kdm4b)
Chromosome and associated proteins [BR:pgeo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117445560 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 DUF7141 53-BP1_Tudor zf-RING-like SLX1_C
Other DBs
NCBI-GeneID: 117445560
NCBI-ProteinID: XP_033937193
LinkDB
Position
4:complement(17911747..17976547)
AA seq 1176 aa
MATEMSMDTVLAPDPAPLSGPHPALGTSEAQDQISSQEPAIPEIPDTALTSEPDAAPDHI
PVPPMNPDKAPGPVPGSELPPAPLLPDSAKNPSCKIMTFRPTVEEFKDFAKYIVYMESQG
AHRAGLAKVIPPEGWKPRKCYDTIEAMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGEYR
KLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDIQEWNIGRLNTLLD
MVEQECGIVIEGVNTPYMYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSWYAVPPEHGKR
LERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQNEGEFMVTFPYGYHAG
FNHGFNCAESTNFATLRWVDYGKMATQCTCRKDMVKISMDVFVRCLQPDRYELWKQGKDI
TVLDHLKATGLSCPELERWREQRVSHRANLLRRAMQKMKQLRRLKLEDVKVLAEEGIELN
AVEYQRQVEEREAQRRLHREERLAKEAMMTLEAMEREEQEAAEAAARAAENTDIEEQEPE
AKPQILAYDTEKKKQRKQKKLTNMNDPITGFEEAFAQFASSSIKKSEINMVRRPELEVSA
PQACYSKVKMPTEVKKSRRHPLSKPPMRSPLSILKQEPTSDKEPSSLTQLDSDMKKQEHL
WQNHSPNFLSEKAFNAAVAALQPHCAVCSLFCPYPEPHKDSFAGSDTQRSSLPRRTCPLV
PEMCFSVGASNTEPPPTNYHIGEDGTSPLLCCSSCNMQVHASCYGVKTDSVRESWTCTRC
AAGAWTVECCLCNLRGGALKSTIDNRWVHVICAIAVPEARFVNANDREPVDVSAVPDTRK
NLKCVFCHGKTANQNRGACIQCSQENCATSFHVTCAQIAGVVMTPADWPYVVSVTCNRHK
RFPPKPRTSLKSQQGLNLGQKVIGRNSDGWYYHCTLIGMATQTFYEVNFDDGSYCDNLHP
ENILGHNCLHSGPPEVGELIVVGTSDGQIINASFIKEHTHKSYQVEFQDQSQLILKHSEI
HLLEHELPKRVRARLAIPVPQVGVSSTDEAQAAKRRCLPSGSAPSTRMETTNKPPCSLTT
AAVASRGAEHLSIHTSQTSQPLPRSAMTLHEAPSHTNGIQMDVETPMDTSVALTEALTES
TLTLTPQPNPFSVDVSFMESLLNSHFHQDSNPGPLY
NT seq 3531 nt   +upstreamnt  +downstreamnt
atggctaccgagatgtccatggacacggtgctggctcctgaccctgcccccttgtccggc
ccccaccctgcccttggcaccagtgaagcccaggaccagatttccagccaggagccagca
ataccagaaatcccagacacagcactgacctcggaacccgatgctgccccagatcacatc
ccggttccgcctatgaacccagacaaggcccccggccctgtgccaggctctgagctgccc
ccagcccccctgctgccggacagcgctaagaacccaagctgtaagatcatgaccttcagg
cccaccgtggaggagttcaaagactttgccaaatacatcgtctacatggagagtcaaggg
gctcaccgggctggactggcaaaggtgattcccccagaaggctggaagccgcggaagtgc
tacgacaccatcgaggccatggtgattccagctcccatcatgcaggtggtgaccggacag
tcgggtctgttcacccagtacaacatccagaagaagtctatgaccgtgggcgagtaccgc
aagctggccaacagcaaaaaatactgcacaccccggcacaaagattttgatgacctggag
aggaagtactggaaaaacctgacatttgtgtcgccaatttatggtgccgatgtcagtggc
tccatctatgatgaggacattcaagagtggaacatcggccgtctgaacacgctgctggat
atggtggagcaggagtgtggcatcgtcatcgagggggtcaacactccctacatgtacttt
gggatgtggaagaccacatttgcctggcacactgaggacatggacctctacagcatcaac
tacctgcactttggacagtcaaagtcatggtatgccgtcccccctgagcacggcaagcgg
ctggagaggttggcgcaaggcttcttccctggaagctcccaaggctgcgacgccttcctt
cgccacaagatgactctgatttctccctccatcctaaagaaatacggcattcccttcgac
aggataactcagaatgaaggggagtttatggtcacctttccttatggctaccatgctggc
tttaaccacggcttcaactgcgcagagtctacaaactttgccaccctccgctgggtggat
tacggcaaaatggctacccagtgtacctgtcgtaaagacatggtgaagatctccatggat
gtgtttgtacgctgcctgcagccggatcgctacgagctgtggaagcagggcaaagacatc
acggtgttggaccatctgaaggccactgggctcagctgccctgaactagagcgctggagg
gagcagcgtgtcagccacagagcaaatctcctgcgaagggccatgcagaagatgaagcag
cttcgtcgtctgaagctggaggatgtcaaggtgctggcagaggaaggcattgagctgaat
gcagtggagtaccagcgtcaggtggaggagcgtgaggcccagaggaggctgcaccgagag
gagcggctagccaaagaggccatgatgacgctggaggcaatggagcgtgaggagcaggag
gctgctgaggccgctgcaagagcagcagagaacacagatatagaagaacaagaacccgag
gccaaaccacagatcctggcatatgacactgagaaaaagaagcagagaaagcagaagaag
ttgacaaatatgaacgaccccatcactgggtttgaggaagcctttgcacagtttgcctcc
tccagcatcaagaagtcagaaatcaacatggtccgtcgtccagagctggaagtgagcgct
ccccaggcatgctactccaaggtgaagatgccaacggaggtaaaaaagagcagacgtcac
cccctcagcaagccccccatgcgctcccctctgtccattctcaaacaagaaccgaccagc
gacaaagagccgtcctccctcacgcagctggacagcgacatgaagaaacaggagcacctg
tggcagaatcactcacccaacttcctgtcagagaaggctttcaatgcagcagtggcagcg
ctgcagccacactgcgctgtctgctccctcttctgtccataccccgagccacacaaagac
agttttgcaggcagtgatacccagcgctcttccctgccccgtcggacgtgtcctctggtc
ccagagatgtgcttcagcgtcggagccagcaacacggagcctccacccaccaactaccac
atcggagaggatggaaccagtcctctgctctgctgttcgtcttgcaacatgcaggttcat
gcaagttgttacggtgtgaagacggactcggtcagggagtcctggacgtgcaccaggtgt
gcagcgggagcttggaccgtggagtgttgtctttgtaacctgcgcggaggagctctgaag
tccaccattgacaaccggtgggtccatgtcatctgtgccatcgctgtgcctgaagcccgc
ttcgtcaacgccaatgacagggagccggtggacgtcagtgcagttccagatacacgcaaa
aatctgaagtgtgtattctgccatggaaagacggccaatcagaaccgcggcgcctgcatc
cagtgctcacaagagaactgcgccacctccttccacgtcacatgcgcacagatcgccggc
gtcgtcatgacaccagccgactggccctacgtggtgtccgtcacctgcaacaggcataaa
agattccctccaaagcctcgcacatccctcaaaagtcagcagggtctgaaccttggacag
aaagtgattggccgtaacagtgacggctggtactaccattgtacactcatcggcatggca
acacagacattctacgaggtcaactttgatgacggctcatactgtgacaacctgcaccca
gaaaacatattgggtcacaactgcctgcattcgggtcctcctgaggtgggggagttgata
gtggtgggcacatctgacggtcagattatcaatgcttcctttatcaaagagcacacccac
aagtcctaccaggttgagtttcaggaccagagtcagctgatacttaaacactcagagatc
catctgctggagcatgaactcccaaagagggtccgagccagactggccatccctgtacct
caggtgggggtttcatccacagatgaagcccaggcagccaaacgccgctgcctcccatca
ggctccgccccgtccacacgcatggagaccaccaataaacccccctgctccctaactaca
gctgctgtagcatcgcgaggagcagaacatctcagtattcacacatcacaaacctcacaa
cctttaccccggtccgccatgaccttacacgaagccccctcccacaccaatggtattcag
atggacgttgagacccccatggacaccagcgtggccctcacagaggctctcacggagtcg
accctgaccctgactccgcagccaaaccccttttcagtggacgtttccttcatggagagc
ctcctcaattcacatttccatcaggacagtaatccaggacccctgtattaa

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