Pseudochaenichthys georgianus (South Georgia icefish): 117445562
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Entry
117445562 CDS
T09629
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03030
DNA replication
pgeo03410
Base excision repair
pgeo03420
Nucleotide excision repair
pgeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117445562 (rfc4)
03410 Base excision repair
117445562 (rfc4)
03420 Nucleotide excision repair
117445562 (rfc4)
03430 Mismatch repair
117445562 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgeo03032
]
117445562 (rfc4)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117445562 (rfc4)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117445562 (rfc4)
DNA replication proteins [BR:
pgeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117445562 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
117445562 (rfc4)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117445562 (rfc4)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117445562 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
117445562 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_16
AAA_assoc_2
AAA_11
DUF815
AAA_30
Mg_chelatase
AAA_14
RuvB_N
AAA_24
SLFN-g3_helicase
KH_DUF2096_C
AAA_19
AAA_5
ResIII
Gp44_lid
7TMR-HDED
Cdc6_lid
AAA_7
AAA_28
Motif
Other DBs
NCBI-GeneID:
117445562
NCBI-ProteinID:
XP_033937197
LinkDB
All DBs
Position
4:40501620..40520071
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGATVQTSRPQKDKAAAGPGTEKKAKAVPWVEKYRPKCIDDVAFQEEVVAVLKKS
VEGADLPNLLFYGPPGTGKTSTILAAARELYGPQLYRQRVLELNASDERGIQVVRQKVKN
FAQLTVAGSRQDGKPCPPFKIIILDEADSMTGPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLSNQIQEERLLDICEKESLKYSKESIAALVTVSEGDLRKAITFL
QSAARLNMDREITESAIIELAGVVPPKMIDSLLQICLSGTFEKLEVAVRNMVDEGYAATQ
ILGQLHEAVIEHDLSDQQKSVLTEKMAVVSKCLSDGADEYLQMLSLCSVIMQQASQHN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttctgaaaggagcgaccgttcagaccagcagacctcagaaagacaaggca
gcagcggggcccggcacggagaagaaagccaaggctgttccatgggtagaaaaatacagg
ccaaagtgtattgatgatgtggccttccaggaggaggtggtcgccgtgctcaagaagtct
gtggaaggagcagatcttcccaacttgctcttctacggcccccccggaacaggaaagacc
tccaccatcttagctgctgccagagagctctatgggccccagctgtacaggcagagggtg
ctggagctcaacgcctccgacgaacgaggcatccaggtagtcaggcagaaggtgaagaac
ttcgctcagctcaccgtggccgggtcacgccaagatgggaagccgtgtcctcctttcaag
atcatcatcctggacgaggcggactccatgacggggccggcccaggcggctctgaggcgc
accatggagaaggagtcccgcaccacccgcttctgcctcatctgcaactacatcagcagg
atcatcgagccccttacctccagatgttccaagtttcgcttcaaacctctgtccaatcag
atccaagaagagcggctgctggatatctgtgagaaggagagccttaaatacagcaaagag
agtatagcagcgttagtgacggtgtctgagggcgacctgcggaaagccatcaccttcctg
cagagtgcggcgcgcctcaacatggaccgggagatcacagagagcgccatcattgaacta
gcgggggtcgtccctcccaagatgattgacagcttgctccagatatgcctctcaggaacc
tttgagaaactagaggtcgcagtcaggaacatggtggatgaaggctacgcagccacacag
atcctgggtcagctccatgaggccgtcatcgagcacgacctgagtgaccagcagaagtca
gtgttaacagagaagatggcggttgtgagtaagtgcctgtcggacggtgcggacgagtac
ctgcagatgttgagtctctgttcggtcatcatgcagcaggcctcccagcacaactga
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integrated database retrieval system
