Pseudochaenichthys georgianus (South Georgia icefish): 117445624
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Entry
117445624 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117445624
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117445624
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Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117445624
NCBI-ProteinID:
XP_033937282
LinkDB
All DBs
Position
4:31876898..31882457
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AA seq
450 aa
AA seq
DB search
MNGDGDYVGSVSSGNGKLRLWLIEQVDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKFREGIDKLDPPTWKTRLRCALNKSNDFDEQVDRSQLDISDPYKVYR
VIPEGAKKRPRQEDSPLSPSYQGHSPYPALQSQMPQYIPTPEGGWRDYCQEPASLPDLPF
PQCPCPPRSLPWQGPSMENGYQLRASIYSYGPADSQPSPFTLDAGIRSAEALSDIRLHVS
VYFRDALLREVTTSSPEGCHLTPCSPEEKHYLTPGLPEVVPLPVDSLSAPRRTDEGPPSP
PSTLDRGVLLWMGSDGLYARRMCPGRVYWQGGLSQYGDKLNKLEREVTCKLLHTQDYLTE
IQSYGLHGRPLPRFQVLLSFGDDILDAQRQRQSLTVQVEPLFARQLLYYAQQMGGHYFRS
YEHPGVTDHINTSEDYQRTITHHHSSSLQE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagatggggattacgtaggctcggtgagcagcgggaacgggaagctgcggctg
tggctcatcgagcaggtggacagcgggaagtacccggggctggtgtgggagaacgaggag
aagagcatcttcaggatcccctggaaacacgccgggaagcaggactacaaccgcgacgag
gatgccgcgcttttcaaggcctgggcgctgttcaaaggaaagttccgggaggggatcgat
aagttggacccccccacctggaagactcgcctccgctgcgccctgaacaagagcaatgac
ttcgatgagcaggtggacaggagccagttggacatctcggacccctacaaggtgtaccgg
gtcatccctgagggcgccaagaaaagaccccggcaggaggacagtcctctgagtccaagt
tatcaggggcactccccctaccccgccctgcagagccagatgccacagtacattcccaca
ccagagggtggatggagagattactgccaggagccggcctccctgcccgacctgcccttc
cctcagtgtccctgtcccccccgcagcctgccatggcagggcccgtccatggagaatgga
taccagctcagagcctccatctactcgtacggccccgctgacagccagccctcgcctttc
acactggacgccggcatcagatcagcagaggcgctctcagacatccgcctgcatgtgtct
gtatatttccgggacgctctgttgagggaggtgaccacctccagtccggaggggtgccac
ctcactccctgctccccggaggagaagcactacctgacgccaggacttcccgaggtggtg
cctctgcctgtggacagcctctcagctccgaggaggacagatgagggtcccccgagcccc
ccctccaccctggataggggggtgttactgtggatgggatcagacggactctacgcccgc
agaatgtgtccgggcagggtgtactggcagggaggactgtcccagtatggagacaagctc
aacaaactggagagagaggtcacctgtaaactcctccacacgcaggactacctgacagag
attcagagttacgggctccacggtcggcctctacctcgcttccaggtcctgctgagtttt
ggagacgacatattggacgcacagagacaaagacagagcctcacagtccaggtggagccg
ctgtttgccagacagctcctgtactacgcccagcagatggggggccactacttccgcagc
tacgagcaccccggagtcacagaccatataaacacatctgaggactaccagaggaccatc
acacatcatcacagcagcagcctgcaggagtga
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