KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117445637
Entry
117445637         CDS       T09629                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03018  RNA degradation
pgeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117445637
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117445637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgeo03019]
    117445637
   03041 Spliceosome [BR:pgeo03041]
    117445637
Messenger RNA biogenesis [BR:pgeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117445637
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     117445637
Spliceosome [BR:pgeo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    117445637
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 117445637
NCBI-ProteinID: XP_033937297
LinkDB
Position
4:complement(2098973..2100729)
AA seq 103 aa
MADKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMESIPNPFVQQQDG
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggataaagaaaagaagaagaaggagagcatcttcgacttgtcaaaatacatcgac
aagccgatccgtgttaagttccaaggaggacgagaggccagcggtgttctgaaaggattc
gatcctctgttgaacctggtgctggacggcaccatcgagtacatgcgggatccagacgac
cagctgaagctgacagaagacacccggcagctggggctggtggtctgcagaggaacctcc
gtcgtgctcatctgtcctcaggacggcatggagtccattcccaaccccttcgtacagcag
caggacggctaa

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