Pseudochaenichthys georgianus (South Georgia icefish): 117445656
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Entry
117445656 CDS
T09629
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117445656 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgeo03009
]
117445656 (rexo1)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
Pre-60S particles
RNases
117445656 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
117445656
NCBI-ProteinID:
XP_033937322
LinkDB
All DBs
Position
4:complement(20427421..20440731)
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AA seq
1258 aa
AA seq
DB search
MLRSTGFFRGLDCPFYAEYSEEKGIKNGCNRPYCHFRHSSQRRASYGAPADVKKQRDLHS
AQKEQGYDPFNPEVVRPQEQKNGEPAPSGDLDGALDLVNKAIEEVRSEVEREKRKLSRIG
DEPYQPSKSKKLSSSDVVKRKKPPSHMPYDPGSYQMTSGGYNPTPGCSKYTLDLDNQGKN
SNSMEYVPALVRKPSSRTNTHQLPSPPHSPKYSTSTSSPKCKYTLDNLKPTTDMEYDPMS
NYSSGIAAKSKRPEKTQAVKMGQRKTHKLSEMSDEEYVVAVKKPRPSIDSKKYIISDSDE
ESSGTEYRPTSLSNLQQRKGNSGPLWITAGKERKERTESMLNALTQRNKEDSDSDVQEFI
IQKDCFEKKKVASQTSHEKIGKSEKVQKLVKEANKKIGSKSSSSSSKDKGSIKNSNQDSA
KKENKSQEKRDDRKNIIKVKTPNKVQKEGKEEMRSDGKIKAVEKVKTDSCKRDKDTENGA
RESKKPKMSEKEKEYNKYKDRQQKNGKLDSSKRENDTKKMNKSSSIDGSSGSHSKGTSAI
NKDRRKQNSSSSNGKKPKEKQPTLSHADLFGDESPDEVEAIVIDHDDDDYDDDEEEVLVR
KSALKRGRLNKRKASEMTPSSSEDEGDQGVEDEVDDVEIDFSSFQEDLDFDSDPMEECLR
IFNESKDVKTEDKGRQAKQPSRDSDEEGDTESTLTTLIPGQKKRVSHFGAKADAPVARPN
KRLSAQAVCYQRMQMAQQQAAQLSASVKASRQSSIPSVSGEKKRIAHRTFPPTTSSKTSP
ADVRPAASRVLSPSQTHQVKPQTTAGILTKTTSTIMQKRVAHTPTMKSSSMKRPIIPIEF
GAKVPNNVRQRYLNTFIDECVKFCRSKDAAFQMALDEEKLVYDRSNSKSIYLNIAVNTLK
KLRGKSSSGPSPAVTKVPGSVNSRRVLSHEELLGGRLAAKTSFTINRMGKQQEEKLIGVT
LYRKLQAYLMSEEQLQENGYPRTSPEASGKAIICNLPEKKAVTDPFNKICCRCGAEYKIN
VNGNCVRKEECCFHWGRLRRHKVSGGWETNYSCCAAGVGAPGCQVCKQHVQDGRKESFDG
YVTTFSKSLPPDGNGGVFALDCEMCYTRHGLDLTRVTVIDSEMKVIYDTFVRPEAKVVDY
NTRFSGVTEEDLENATITLRDVQAVLLSMFSAESILIGHSLESDLLALKLIHSTVVDTAI
VFPHRLGAPYKRALRNLMADHLKRIIQDNVNGHDSSEDASACLELMLWRIKEDAKVKR
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgctaagatccaccggcttcttccgggggcttgactgcccgttttacgcagaatacagc
gaggaaaaaggcatcaaaaatgggtgtaacagaccgtactgtcacttcagacacagctcg
cagcgacgggcgtcctacggagctccggcagatgttaaaaagcaaagagacctccactcc
gcacagaaagaacaaggttatgatccattcaacccagaagtggtgaggccccaggagcag
aagaatggagagccggctccttcaggagacctcgatggtgcgctggacctcgtcaacaag
gccatcgaggaggtccgcagcgaggtggagagggagaagaggaagctctctcgcattggg
gatgaaccgtaccaaccaagcaagagtaaaaagttgtcttcgtctgatgttgttaagaga
aaaaaaccgccatcacatatgccttatgaccctgggagttatcagatgacatcagggggg
tataatcccacccctggctgcagcaagtatactttggatttagacaaccaggggaaaaat
agcaactctatggaatatgttcctgctttggtgagaaagccttcatctcggacaaacaca
caccaactcccttctcctccccatagtccaaagtactcaaccagcacatcgtcccccaag
tgtaaatacactctggacaatttaaaaccaactacagatatggagtatgacccaatgtcc
aactattcgtcaggaattgcagcgaaaagcaaaaggcccgagaaaacacaagctgttaag
atggggcaaagaaagacacacaaactatcagaaatgtcagacgaggagtatgttgtagct
gtcaaaaagccccggccgagtatagactctaaaaaatacattatatctgactctgatgag
gagagctccggcacagagtatcgacccacgtcgcttagcaatctccagcagagaaaaggc
aacagtgggccactttggatcactgctgggaaggagagaaaagagagaactgaaagtatg
ctaaatgcattgacacagaggaacaaagaggactccgactcagatgtccaggaatttatt
atacaaaaggactgtttcgagaaaaagaaggtggctagtcaaactagtcatgagaaaatt
ggcaaatctgagaaagtgcaaaaactcgtaaaggaagctaacaaaaagattggtagtaag
agtagcagtagcagcagtaaagacaaagggtcaataaagaactcaaaccaggactctgca
aagaaggagaacaagagtcaggaaaaaagagacgataggaaaaacataattaaggttaaa
acacctaataaagttcagaaggaagggaaagaggaaatgagaagcgatggtaagatcaaa
gctgtggaaaaagtcaaaactgattcctgcaaaagggataaagatacagaaaatggtgca
agggaaagcaaaaaacccaagatgtcagagaaggaaaaggaatacaacaagtataaggac
cgccaacagaaaaatggtaaacttgatagcagtaaaagagaaaatgatacaaagaaaatg
aataaaagcagttctattgatgggagcagtggtagtcacagcaaagggacttcagcaata
aataaagataggcggaagcagaacagcagctcatcaaatgggaaaaaacccaaagagaaa
cagccgactcttagccacgctgatctgtttggagatgagagtccagatgaggttgaagca
attgtaatagaccacgatgatgacgattatgacgacgatgaggaggaagtgcttgtgagg
aaatctgctttaaaaaggggacgcctgaacaagagaaaagcgtcagagatgacaccttct
tcctctgaagatgaaggggaccagggtgtggaggacgaggtggacgatgttgaaatcgac
ttctctagtttccaggaggatctggactttgactcagatcccatggaggagtgtttgcgg
atctttaatgaatccaaggatgtgaagacggaagacaagggaaggcaggctaaacagccc
tccagagattcagacgaggaaggggacacagagagcactttaaccactcttattcccggt
caaaagaagagagtctcccattttggtgccaaagctgacgcacctgttgctcgaccaaac
aagagactctcagcccaggcggtctgctaccagcgtatgcagatggcgcagcagcaagcc
gctcagctctctgcttcagtgaaagcttcccgacaaagctccattcccagcgtctctgga
gagaagaagagaatagcccaccgtaccttcccaccgacaacttcctccaaaacaagtcct
gcagatgttagaccagctgccagtcgagtgttatcccccagccagacccatcaagtgaag
ccccaaaccaccgcgggcatcttaaccaagaccacgtccaccatcatgcagaagagggtg
gcacacacccccaccatgaagagtagttctatgaagcgccccatcatccccattgagttt
ggggccaaagttccaaacaacgtccggcagcgctacctcaacactttcatagacgaatgt
gtcaaattttgccgatcaaaggatgctgctttccaaatggcgcttgacgaggagaagctg
gtgtatgatcgcagcaacagtaagagcatctacctcaacatagctgtcaacactctgaag
aagctacgcggcaagagcagctccggtccatcaccggcggtcaccaaggtcccggggtca
gttaactccaggagggttctgtcccacgaggaacttctcggaggccgtcttgctgcgaaa
actagcttcaccatcaacaggatgggtaaacagcaggaagagaaactcattggagtcaca
ctgtacaggaagctgcaggcgtacttgatgagcgaggagcagctccaggagaacggatac
ccgaggacaagcccagaggcttccggaaaggccatcatctgcaacctcccagagaagaag
gctgttacagaccccttcaacaagatatgctgtcgatgcggagccgagtataagatcaat
gtcaacggcaactgtgtacggaaagaggagtgttgctttcactgggggcgactgcgcaga
cacaaagtctctggaggctgggagacaaactacagctgctgcgctgcaggtgtcggtgct
ccaggttgccaagtttgcaagcaacatgttcaggacgggcgtaaagagtcatttgacggc
tacgtgacaacgtttagtaaatctctgccaccagacggaaatggaggcgtgttcgctttg
gactgtgagatgtgttacacgaggcacggcctggatctgacgagggtgaccgtcatcgac
tctgagatgaaagtcatctacgacacatttgtcagacctgaagccaaagtggtcgactac
aacacacgattttcaggtgtgacggaggaggacttggagaacgctaccatcactctgaga
gatgtccaggccgtgctgctcagcatgttcagtgcagagtccatcctcatcggacacagt
ctggagagtgacctgctcgctctgaagctgatccacagtacagtagtagacacggccatt
gtgttccctcaccgcctcggtgcaccctacaaacgagccctgaggaacctcatggccgac
cacctcaaacgcatcatccaggacaacgttaacggccacgactccagtgaagatgcgtcc
gcctgcttggagctgatgctgtggaggatcaaggaggatgccaaggtcaaaagatga
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