Pseudochaenichthys georgianus (South Georgia icefish): 117445666
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Entry
117445666 CDS
T09629
Symbol
slc44a5b
Name
(RefSeq) choline transporter-like protein 5-B isoform X1
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117445666 (slc44a5b)
04147 Exosome [BR:
pgeo04147
]
117445666 (slc44a5b)
Transporters [BR:
pgeo02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
117445666 (slc44a5b)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
117445666 (slc44a5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
DUF2207_C
MMPL
Motif
Other DBs
NCBI-GeneID:
117445666
NCBI-ProteinID:
XP_033937344
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Position
4:5648388..5690299
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AA seq
711 aa
AA seq
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MARKTDTRSSYYGEPRKFDPTFRGPVHNRSCTDVVCCVVFIAFIIGYIALGTVAWIHGDP
RKVVYPTDSRGKFCGQQNTPNANKTKLFYFNMLKCANPAVLINLQCPTTQLCVSKCPDSF
STLLDAWGTNKWEYYKQFCKPGFKISSKTVLEVIRDEDCPSMIVPSRPFLQRCFPDFITK
NGTLTVANQTNFKDGDNNHRSVNDLKDAAKGIASLLNANEVGIKIFEDYANSWDWILIGL
VITMVVSLIFILLLRYTAGVLLWLIIISVITVIGFGIWHCFWEYSNLTRKPGANVAISDI
GFQADFSIYLKLSQTWLIFMISLSVIEAVIVIILIFLRTRLRIAIALMKEGSKAISYVMS
SLFYPIITFLLLAICIAYWAVTAVFLASSGNAVYKVTPADDKCMYANLTCSPNTFTETNV
SQVCPGAQCMFAFYGGETMYHRYILVLHLCNLFMFLWLVNFTIALGQCTLAGAFASYYWA
LKKPDDIPVSPLYSSFSRAIRYHTGSLAFGSLILAVVQLIRVLLVYLNTKLKGSENACAR
FLLCCLQCCFWCLENFIRFMNRNAYIMIAIYGKNFCTSSKDAFFLLMRNIIRVAVLDKVT
EFLLFLGKLLISGSVGVLAFFFFTRKIPVIQEEVPSLNYYWVPLVTVIFGSYMIAHGFFN
VYAMCVDTLFLCFCEDLERNDGSSFRPYYMSPGLHKILRKGEEGSKSCAAS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaagacggacacccgctcatcttactatggtgagccgcgcaagtttgacccc
accttcagagggcctgttcacaacaggagctgcactgatgtggtttgctgtgttgtcttc
atcgctttcatcatcggctacatcgcgctgggtactgtggcctggatccatggcgacccc
aggaaggtcgtctatccaaccgacagccgcggtaagttctgtggccaacagaacaccccc
aatgcaaacaaaaccaaattattctacttcaacatgttgaaatgtgccaaccctgcagtt
ttgattaacctccagtgccctactacccagctctgtgtctccaagtgccctgacagcttt
tcaaccctcctggatgcatggggtaccaacaaatgggaatattacaagcaattctgcaag
ccaggcttcaagatcagcagcaagacagtacttgaagtcatacgagatgaagactgccct
tctatgattgtgccaagcagaccttttcttcaacggtgcttccccgatttcattacgaaa
aacggaactttaactgtagccaaccagaccaacttcaaagacggtgacaataaccacaga
agtgtcaacgaccttaaagatgctgccaaaggtatcgccagtctcctcaacgccaatgaa
gtcggcattaagatctttgaagattatgcaaattcctgggactggatcctcataggtctg
gtgattaccatggtggtcagtctgatctttatcctgctgctgcgctacactgctggggtg
ctcctgtggctcattatcattagtgtcatcactgtgatcggctttggtatctggcactgc
ttctgggagtacagcaatctgaccaggaagccaggtgctaatgtcgccatctctgacatc
ggcttccaagcagacttcagcatttacctaaagctcagccaaacgtggctcatcttcatg
atctcactttctgtgattgaggccgttattgtgattatactgatatttctgaggacgagg
ctgcgcatcgctattgcattaatgaaggagggaagcaaggccatcagctacgtcatgtcc
agtctcttttaccccatcatcaccttcctcctcctggccatctgcatcgcttactgggcc
gtcacagcagtcttcttggcatcatctggtaatgcagtctacaaggtcacacctgctgac
gataaatgcatgtatgccaatctcacatgcagcccaaacaccttcactgagaccaatgtt
agccaagtgtgccccggagcccaatgcatgtttgccttctacggtggggagaccatgtac
caccgctacatcctggtgctccacctgtgtaacctgttcatgttcctctggctggtcaac
ttcaccatcgctctgggacagtgcaccctggccggggccttcgcgtcctactactgggcc
ctgaagaagcccgacgacatcccagtgagccccctctactcctccttcagccgagccata
cgctatcacacaggttctcttgccttcggttctctgatcctcgctgtggtgcagctgatc
cgggtgcttctcgtgtatttgaataccaaactgaaaggttctgaaaacgcatgtgctcga
ttcctgctttgctgtctccaatgctgcttctggtgcctggagaacttcatcaggttcatg
aacagaaatgcatacatcatgatagcaatatatggaaagaacttctgcacctcttccaag
gatgctttcttccttttgatgaggaacattattcgggtggctgtcctggacaaggtgaca
gagtttctgcttttcttgggaaaactgcttatttcaggaagtgttggtgttcttgcattt
ttcttcttcacacgtaaaataccagtcattcaagaggaggtgccatccctaaattactac
tgggtcccccttgtgacggtgatatttggatcctacatgattgcgcatggattttttaat
gtctatgccatgtgcgtggacacgttgttcctgtgcttttgtgaagacctggagaggaat
gatggttcttccttcaggccctactacatgtctcctggcctgcacaagatcctgcgcaaa
ggagaggagggttccaaatcatgcgctgcctcttga
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