Pseudochaenichthys georgianus (South Georgia icefish): 117445668
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Entry
117445668 CDS
T09629
Symbol
hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117445668 (hdgfl2)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117445668 (hdgfl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
117445668
NCBI-ProteinID:
XP_033937348
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All DBs
Position
4:3776925..3790303
Genome browser
AA seq
815 aa
AA seq
DB search
MPHSFQPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAAKDLFA
YEKYSERYGKPNKRKGFNEGLWEIQNNPHASYSAPPAPLGSPDGQQSKPASSSDSEGNDA
GRGSDEDDAEEEAAPAPKKADSASVVDSDSGSEDEGKGAAVKRKPPPAKRPPPPKKARGS
SSERDKQESGSDSEPTPSESESGKNSDQDFTPEKKAGGGGRGGPKAGGKAKNKKDMSGSD
SDSGSEPEKKAAGGGRGGPKAGGRAKNKKDMSGSDSGSGSEPEKKAGGGGRGGPKAGGRA
KNKKDMSGSDSDSGSEPEKKAGGGGRGGPKAGGRAKNKKDMSGSDSDSGSEPEKKAAGGG
RGRPKAGGRAKNKKDMSGSDSDSGSEPEKKAADSESEDEKPRPAVSGSESQSGSKSDSDS
DPPPKKAPQARKKAPTEKPAPKPRARKPKPKPTPAKRTPSSSSDSDSDSGPDRISEWKKR
DEERKRELEERRKKEEAEELRRLREREKEEDEQKKKDKDKGKKASESDSDNSSDPGVEEH
PLKKSKKPPPAPIPAPSDSDSPAHTESKKSSKKQDNQKKARIKKEKERKDKKEKELKQKK
ARRSEEKTRARSKPEKPRRKPERPPEKKVEKKKEPSPDEKLQKLHTDIKFALKVDNPDID
RCLQALDELAAVPVTSQILHKNAEVIATLKKIRRYKASNAVMIKATEVYNKLKLRFMGKS
EEAAKPQTEDKEPENSEKETQNTDSAPVNGDSQEKKDDMEVKENPKSPANEENNDDTASS
PIRRSPESPAEPQLHKYEEADKSISAETEPPAVES
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacagcttccagcccggagacctggttttcgctaaaatgaaggggtacccccac
tggccagccaggattgaagacgtggctgatggggcagtgaaaccacctcctaataaaatc
ccaattttcttctttgggacacatgagacagcattccttgcagcaaaggacctttttgcc
tatgaaaagtacagcgaacgctatggaaagcccaacaaaaggaaggggttcaatgaaggt
ttatgggagatccagaacaatccacatgcatcctacagcgcaccgccagcaccgttaggg
agtcctgatggccagcagtctaagccggccagctcatctgacagtgagggcaacgatgcc
ggacgaggaagtgatgaagatgacgcagaggaagaagcagctccagcgcctaagaaagca
gattcagctagtgtggtggactcagattctgggagtgaagatgaaggaaagggagcagct
gtgaagagaaagccacctcctgctaagcggcctccacctccaaaaaaggctcgtggctcg
tccagtgagcgagacaaacaggagagtggatctgactcagaacccacaccttcagagtct
gagtctggcaagaatagtgaccaggattttactccagagaagaaagcaggtggtggaggg
cgaggtggaccgaaagcaggaggcaaagcgaagaacaagaaggatatgtctggctcggac
tcggactcaggatcagaaccagagaagaaagcagctggtggaggacgaggtggaccgaaa
gcaggaggcagagcaaagaataagaaggatatgtctggctcagactcaggatcaggatca
gaaccagagaagaaagcaggtggtggaggacgaggtggaccgaaagcaggaggtagagcg
aagaacaagaaggatatgtctggctcagactcggactcaggatcagaaccagagaagaaa
gcaggtggtggaggacgaggtggaccgaaagcaggaggcagagcgaagaacaagaaggat
atgtctggctcagactcggactcaggatcagaaccagagaagaaagcagctggtggagga
cgaggtagaccgaaagcaggaggcagagcgaagaataagaaggatatgtctggctcagac
tcggactcaggatcagaaccagagaagaaagcagctgacagcgagtcggaggacgagaag
cctcgaccggctgtgtccggctccgagtctcagtctggctcaaagtctgactcagactca
gaccctcctcctaaaaaagccccacaggcacgcaagaaagcacccacagagaagcccgca
ccaaagcctcgtgcacggaaacccaaacccaaaccaaccccggcaaaacgaacaccttca
tcttcatccgacagcgacagtgacagtggccccgaccgcatcagtgaatggaagaaacga
gacgaggagcgtaagcgagagctggaggagcgccggaaaaaagaggaggcagaggagctc
cgcaggctacgtgagcgagagaaggaggaagatgagcaaaagaaaaaagacaaagataag
ggtaaaaaggcgagcgagagtgacagcgacaacagctcagatccaggcgtagaggagcat
ccattgaagaagtccaagaaaccccccccagcccccatccccgctccctcagactctgat
tctccggcacatactgagtcaaagaagtcatccaagaagcaagacaaccagaagaaggcc
agaataaagaaagagaaggagagaaaagataagaaggagaaagagcttaaacagaaaaaa
gccagacggtcagaagagaagaccagagcgaggtctaagcctgaaaaaccaagacgcaaa
ccagagaggccgccagagaagaaggtggaaaagaaaaaggagccatcaccagatgaaaag
ctacagaaacttcacactgacataaagtttgcactcaaagtggacaacccggacatagac
cggtgtctacaggcgctggatgaactggctgctgtgcccgtcaccagccagatcctccat
aagaacgctgaagttattgccacactaaaaaagatccgacggtataaggccagtaatgca
gtcatgataaaagccactgaggtctacaacaagttaaaactacgctttatgggaaagtcg
gaggaggcagctaaacctcaaacagaggacaaggaaccagaaaatagtgagaaggagaca
caaaacacagactctgctccagtgaatggggattcacaagagaaaaaggatgatatggag
gtaaaggaaaatccaaaatcaccagccaatgaggaaaataatgacgatactgcttcaagt
ccaatcagacggagcccagagagccctgctgaaccacagcttcacaagtatgaagaggca
gacaagtccatctctgcagagacggaaccgccagctgtagaaagctga
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